Gchil9064.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9064.t1
Unique NameGchil9064.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length549
Homology
BLAST of Gchil9064.t1 vs. uniprot
Match: R7QCY2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCY2_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 3.990e-25
Identity = 166/624 (26.60%), Postives = 247/624 (39.58%), Query Frame = 0
Query:    5 LPSPSARAVKGVGFSDHLIVLGASPPTSSSPTSLPHARVFAKPSHPPPPVLHXXXXXXXXASPSPSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQTRIPPHEVVLRPPDRRRPRCFADAASSPLPPPVLRDH---PAHSSDSDSD-NGTIQSARVSSVHVLDL----------DHHQLARCTRLNTKLNSLPSGGAFSFLNSSDDVLTDSAPSASPLXXXXXXXXXXXXXXXXXXXXXSSDHYLESRKLIRVDGSAKLSTASGVLDSSDD---EHPSDEFNIDGAEPVEEEQAVQLASFGSALPHIPLHPQQXXXXXXXX-----HSSLAPIPSSSNTTPDRQRPNPSNSKARTMPLSRPCNADALQQHILNGCHPVDSAPSKRPSRLRLTFFRSP-------------------------------------SARRAAGTRRGEHSPAVHDEDVIEQRMGSFSSISCFSTRRSSARLRSMRADRVDARPSAA-----PSRGAAAAATTTNMGAQA--QMVAVPEFE------------ARRMVKNISLQRDDFIDFTTNGRNTAVKRAPWLTRLVSGGQDGSVSGSDGGD--RHSTASSTTKGVKRLLRVFGRK 548
            +P     A KGV FSD  I+LGA  P SS+ T+  H+    +  H   P LH                                                      I P +V LRPP +RR R  +D +       +  +H   P  +S +DSD + +I S+ +  +               +   + + TR+NTKLNS+PSGGAFSF+NSS+D+++DS  ++                        + D    SR++IRVDGSAKLS+ASG+ D  DD       D F I+GAE V+EE+ +Q+ SFG +   + L   +              S +A     S     R+R    +S  R     RP  +D      L G +   S P +R SR+RLTF +                                       S  R   TR  +    +  +   +  M      SCF +R+ +A  R  R+   + +P A+     P +  +         +QA  Q+V+ P+               R++VKN+SLQ+DD+IDF TN   +  +R PWL R++S  +  S +          +    T K  KR  RVF RK
Sbjct:    1 MPRTPRAAAKGVEFSDEPIILGA--PASSTATTADHSPSIYQSHHSSEPHLH------------------------------------------------------ISPADVALRPPGKRRARFHSDQS-------LTLNHVEEPLETSCTDSDASASIPSSPLHPIAKKAFLAAQYDGTPQNEKLVEQSTRINTKLNSMPSGGAFSFMNSSEDIVSDSLDTSDS---------------DTETASSTDDDLRSSRRMIRVDGSAKLSSASGLND--DDFLXXXXXDGFGIEGAERVDEEEDIQVRSFGRSFARVSLKDGEDVIIRDPRKKDGARSEVAFALPGSEEDGGRRR----SSSVRVPDRPRPLESDG--DSGLRGMNTSRSDPPRRKSRMRLTFNKRAATANAVKNAQRKSMXXXXXXXXXXXXXXXXXXXXXXXSIDRVLATRSMQPDVDMSSDTDSDVMMTG----SCFPSRKGTASRRRTRSSTSNVKPGASVDIAWPQQDKSKLGGWGRKKSQAAGQLVSPPDMSNMVEGRRRHPSPERKIVKNVSLQKDDWIDFATNAARS--QRHPWLVRVLSANRMSSPAKKQTRPIAAQTEQDKTRKKSKRFWRVFSRK 532          
The following BLAST results are available for this feature:
BLAST of Gchil9064.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QCY2_CHOCR3.990e-2526.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1268671..1270317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9064.t1Gchil9064.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1268671..1270317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9064.t1 ID=Gchil9064.t1|Name=Gchil9064.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=549bp
MRASLPSPSARAVKGVGFSDHLIVLGASPPTSSSPTSLPHARVFAKPSHP
PPPVLHPVVHPAVHASPSPSPSSPSSLSPPSPPSSPSSPSSPSPPPPPPP
PPLPPAAQTRIPPHEVVLRPPDRRRPRCFADAASSPLPPPVLRDHPAHSS
DSDSDNGTIQSARVSSVHVLDLDHHQLARCTRLNTKLNSLPSGGAFSFLN
SSDDVLTDSAPSASPLPSPSSTSSSSSSSLSSSSSSGSSDHYLESRKLIR
VDGSAKLSTASGVLDSSDDEHPSDEFNIDGAEPVEEEQAVQLASFGSALP
HIPLHPQQQQQQQQQLHSSLAPIPSSSNTTPDRQRPNPSNSKARTMPLSR
PCNADALQQHILNGCHPVDSAPSKRPSRLRLTFFRSPSARRAAGTRRGEH
SPAVHDEDVIEQRMGSFSSISCFSTRRSSARLRSMRADRVDARPSAAPSR
GAAAAATTTNMGAQAQMVAVPEFEARRMVKNISLQRDDFIDFTTNGRNTA
VKRAPWLTRLVSGGQDGSVSGSDGGDRHSTASSTTKGVKRLLRVFGRK*
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