Gchil9441.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9441.t1
Unique NameGchil9441.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length296
Homology
BLAST of Gchil9441.t1 vs. uniprot
Match: A0A2V3IQK3_9FLOR (DUF1995 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQK3_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 1.590e-94
Identity = 147/253 (58.10%), Postives = 177/253 (69.96%), Query Frame = 0
Query:   40 RRTARCCAPSEAPSVPLFDDRRGTRGVFAVSHAKVLSQCVNALSEAVQQAANKGGGRVKLTVDFPPERSESRAGTLVSRYENNLNFTEKLLARLGVDTERCERVGGVVDICDNVNPQGGGEYLSDDECMVGFRAGECGMLQGRRLLVLFNAGMDGGTLRGVKTLDEDEDGVVVLVNCGLDRLSWFAKRGFADYIDGFKAAYYLKAVGG-GWLFKSGAEPWRTFVRRGDALQTITASERKPRLVDVETQIRLAL 291
            R    C A      +PL D+    RGV  +S+A +LSQCV+ALSE    +       ++LT+DFPPE SE+ AGTLVSRYENNLNF+EKLLA LGV  + CE VGG V+ICDN+NPQGGGEYL+DDECMVGFRA     L GR LL++ NAG+D GTLR V   D D+  VVVLVNCGLDRLSWFAKR FA YID + +AYYLK V G GWLFK G EPW  +V      + ++  E+KP+L DVE QIR+A+
Sbjct:   41 RHIPTCSAGFSPAPIPLSDEPSAARGVRRLSYATILSQCVSALSEIAAASPPPSNQSLRLTIDFPPESSETSAGTLVSRYENNLNFSEKLLAGLGVPCDTCEPVGGTVEICDNINPQGGGEYLTDDECMVGFRAQSSPALDGRPLLIMINAGVDAGTLRDVSKYDTDQSAVVVLVNCGLDRLSWFAKRSFAGYIDSYASAYYLKNVAGNGWLFKCGNEPWSIYVEGAAGPRLVSQVEKKPKLFDVERQIRVAM 293          
BLAST of Gchil9441.t1 vs. uniprot
Match: R7Q0M0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q0M0_CHOCR)

HSP 1 Score: 120 bits (302), Expect = 1.190e-29
Identity = 75/145 (51.72%), Postives = 94/145 (64.83%), Query Frame = 0
Query:   53 SVPLFDDRRGTRGVFAVSHAKVLSQCVNALSEAVQQAANKGGGRVKLTVDFPPERSESRAGTLVSRYENNLNFTEKLLARLGVDTERCERVGGVVDICDNVNPQGGGEYLSDDECMVGFRAGECGMLQGRRLLVLFNAGMDGGTL 197
            S+PL    RG     +VS+A++LS  V+A+   V   AN     + LT+DFPP+RSE+  GTLVSRYENNLNF EKLL  LG  +     VG  + ICDN+NPQGGGEYL+DDE MVG +A     L GR + VL NAG+D  +L
Sbjct:   28 SLPLTATPRGP----SVSYAQILSHSVSAVESLV--TANPP--TLHLTLDFPPDRSETDTGTLVSRYENNLNFAEKLLLELGASSPT--PVGPNIQICDNINPQGGGEYLTDDEVMVGLKA-PVDKLGGRVVTVLLNAGVDVDSL 161          
BLAST of Gchil9441.t1 vs. uniprot
Match: A0A1X6P0N9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0N9_PORUM)

HSP 1 Score: 103 bits (257), Expect = 6.090e-22
Identity = 77/191 (40.31%), Postives = 103/191 (53.93%), Query Frame = 0
Query:   94 GGRVKLTVDFPPERSESRAGTLVSRYENNLNFTEKLLARLGVDTERC--ERVGGVVDICDNVNPQGGGEYLSDDEC--MVGFRAGECGMLQGRRLLVLFNAGMDGGTLRGVKTL--DEDEDGV-----VVLVNCG------LDRLSWFAKRGFA-DYIDGFKAAYYLKAVGG-GWLFKSGAEPWRTFVRRG 265
            GG   +TVD PP R+ESR+GTLV RYE +L+F   LL  LG        ER+G  V+I    NPQGGG+YL+++    +VG    + G   GRR+ VL NAG+D   L GV  +  D + DGV     V+L+N G      LDRL W  +R  A + +  F  AY +  +GG G +  S    W  +  RG
Sbjct:  101 GGATAVTVDVPPSRAESRSGTLVGRYEADLSFAVALLEALGAPEGAAGYERIGENVEIRHTNNPQGGGDYLTEEGLWGVVGTTTADAGA-PGRRVTVLGNAGVDVAALAGVAAIVNDNENDGVDAGSVVILLNGGIGRVTWLDRLGWGKRRAAAWESLTRFVPAYAILRIGGDGVMGYSWGGEWTVWKVRG 290          
The following BLAST results are available for this feature:
BLAST of Gchil9441.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IQK3_9FLOR1.590e-9458.10DUF1995 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q0M0_CHOCR1.190e-2951.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P0N9_PORUM6.090e-2240.31Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018962Domain of unknown function DUF1995PFAMPF09353DUF1995coord: 75..284
e-value: 2.1E-13
score: 50.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:4144516..4145403 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9441.t1Gchil9441.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 4144516..4145403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9441.t1 ID=Gchil9441.t1|Name=Gchil9441.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=296bp
MGASQACAFVPAHVSLGGFLCVRGIHAACDRSPAQALCARRTARCCAPSE
APSVPLFDDRRGTRGVFAVSHAKVLSQCVNALSEAVQQAANKGGGRVKLT
VDFPPERSESRAGTLVSRYENNLNFTEKLLARLGVDTERCERVGGVVDIC
DNVNPQGGGEYLSDDECMVGFRAGECGMLQGRRLLVLFNAGMDGGTLRGV
KTLDEDEDGVVVLVNCGLDRLSWFAKRGFADYIDGFKAAYYLKAVGGGWL
FKSGAEPWRTFVRRGDALQTITASERKPRLVDVETQIRLALAALP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995