Gchil7537.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7537.t1
Unique Name	Gchil7537.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	655

Homology

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BLAST of Gchil7537.t1 vs. uniprot
Match: A0A2V3J3J8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3J8_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 1.660e-83
Identity = 172/396 (43.43%), Postives = 238/396 (60.10%), Query Frame = 0

Query:  249 RKRGRPRGSKNKPKSTNTASRIPFDIPRDNIPAT--TDEQSELDLTEMFEMYNKHYIRDFQRSRRQNWKEENLRAPNGLPESGPEDLIFELMPIFAKLEAEKNRIITEKEKNIRRFIDKTFHQFASSHRSDRRQLNLKPFKLREDEKKVCAECEGVGMLRCEYCEGFGFVDFGENGEKFYEEFGTDNVTLPKQIMGTMYHCPSCDGSTQVECSDCSGTGSMEDLLPRKSGASRTPVNNYAKDEFDIEKFLEEEKDRVEIGLDGTIVLRARRRRGGKE---GSHG--------------VKRKSDSGRNEKQS---GLQE---PDRSPPINRSHRSSPAMERLRDFIQKNKRDLFQEPSNEVNGRISRAKSSGTDFINTTDFKVGRNLRNRKPIHFS 619
            RKRGRP GS NK K    AS  P D   D   ++    ++ ++DL  + ++  K   + F++  R++W++  L+APNGLP+SGPED  +ELMPIF+KLEA +NR ++E E  I+R     F +FAS+HRS  R  NLKPFKLRED+KK C++CEG GM+         FVDFG+N  KFYEEF    + LPK +MG +YHCP C G T+  C  C G+G +E+   RK GASRTP+NN+A +EFDIE+ +E EKDRVEIGLDGT+V+RAR+R+  K+     HG               +R+ DSG +++ +   GL+    P +   I+R+H    A+   R  ++        E  N    R  RA    TDF+N TD++VG+ LR+   I FS
Sbjct:  245 RKRGRPVGSTNKQK----ASDFPLDELSDMEWSSFVAGDEPDIDLDFLEDLIRKWRTQSFRKRPRKDWRKAYLKAPNGLPDSGPEDYFYELMPIFSKLEARRNRKLSEHEIEIKRLAAAAFQRFASTHRSSGRLANLKPFKLREDDKKTCSDCEGTGMVTXXXXXXXXFVDFGKNAHKFYEEFEEGTMLLPKHVMGNIYHCPYCGGLTRERCVPCLGSGVIEEANSRKRGASRTPINNFAWEEFDIEELIEREKDRVEIGLDGTVVMRARKRKSRKKKGVAEHGKHETDMRERKAKRQAQRRLDSGGSDQDTEDEGLKSNLTPKKYSDISRNH----ALAATRGVMET------PESINSSKYRPFRATGRTTDFLNITDYQVGQALRSHDQIPFS 626

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BLAST of Gchil7537.t1 vs. uniprot
Match: R7Q104_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q104_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 9.550e-44
Identity = 108/321 (33.64%), Postives = 161/321 (50.16%), Query Frame = 0

Query:  321 APNGLPESGPEDLIFELMPIFAKLEAEKNRIITEKEKNIRRFIDKTFHQFASSHRSDRRQLNLKPFKLREDEKKVCAECEGVGMLRCEYCEGFGFVDFGENGEKFYEEFGTDNVTLPKQIMGTMYHCPSCDGSTQVECSDCSGTGSMEDLLPRKSGASRTPVNNYAKDEFDIEKFLEEEKDRVEIGLDGTIVLRARRRRGGKEGSHGVKRKSDSGRN----------------------EKQSGLQEPDRSPPINRSHRSSPAMERLRDFIQK---------NKRDLFQEPSNEVNGRISRAKSSGTDFINTTDFKVGRNL 610
            APNGL + GP DL+ EL+P+ AK E    R +T+KE  ++  +D  ++ +AS++++  R  NL+PF+L+++ ++VC  C G GM +        FVD GEN EKF EEF  +  TLPK + G +YHCP C G  +  C +C G+G + D   R+ G +   V +      D ++ L +E DR+EIGLDGTIV+RA++ +  + G  G K K D                          E               ++      M+R R   +K         N R+    P+ +   +  R   S TDF+NTTDFK+GR L
Sbjct:  197 APNGLAD-GPPDLLQELLPLLAKEEQRNARTLTDKELELKDRVDACWNLYASTYKNSERLDNLRPFRLKDEAERVCERCAGEGMAQXXXXXXXXFVDLGENAEKFEEEFKGNTFTLPKLVTGNIYHCPLCGGLKEERCIECFGSGVIRDSAERQEGEAAEDVGDAGWHALDFDELLRKEADRIEIGLDGTIVMRAKKHK--RTGRRGRKAKEDMAEEVLAELKDXXXXXXXXXXXXXXXETAQXXXXXXXXXXXXKTETEEGTMKRKRGRPKKAAVGMSRNSNVRESGPAPTKQAFAQPIRRPPSSTDFLNTTDFKMGRRL 514

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BLAST of Gchil7537.t1 vs. uniprot
Match: A0A1X6NSM2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSM2_PORUM)

HSP 1 Score: 72.0 bits (175), Expect = 2.250e-9
Identity = 35/98 (35.71%), Postives = 44/98 (44.90%), Query Frame = 0

Query:  382 NLKPFKLREDEKKVCAECEGVGMLRCEYCEGFGFVDFG--ENGEKFYEEFGTDNVTLPKQIMGTMYHCPSCDGSTQVECSDCSGTGSMEDLLPRKSGA 477
            NL+P+       + C  C+G GM  C YC G GFV  G       F          LP  +MG  +HCP C G  +  C  C G G++E   P K GA
Sbjct:  395 NLRPYAAAAAAARACPPCDGTGMATCSYCRGAGFVRLGGRPGARVFSITHNQSMAVLPTHVMGDTFHCPLCGGLRRERCVRCGGVGTIEP--PPKRGA 490

The following BLAST results are available for this feature:

BLAST of Gchil7537.t1 vs. uniprot

BLAST of Gchil7537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3J3J8_9FLOR	1.660e-83	43.43	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q104_CHOCR	9.550e-44	33.64	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A1X6NSM2_PORUM	2.250e-9	35.71	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017956	AT hook, DNA-binding motif	PRINTS	PR00929	ATHOOK	coord: 170..181 score: 53.12 coord: 134..144 score: 64.77 coord: 210..220 score: 51.89
IPR017956	AT hook, DNA-binding motif	SMART	SM00384	AT_hook_2	coord: 55..67 e-value: 6.8 score: 10.6 coord: 134..146 e-value: 0.92 score: 15.5 coord: 248..260 e-value: 2.8 score: 12.7 coord: 212..224 e-value: 0.86 score: 15.6 coord: 172..184 e-value: 130.0 score: 3.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 559..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..654
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 517..590
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 526..543
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..654
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..274
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 388..467

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000007_pilon	contig	tig00000007_pilon:1792745..1794709 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7537.t1	Gchil7537.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000007_pilon 1792745..1794709 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7537.t1 ID=Gchil7537.t1|Name=Gchil7537.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=655bp
MLGFGFISTPSLLLIIPDGRNQSLSRCQRIGLTSPFRTAPAFTLHTVLCT
NSEPPRKRGRPKGSRNKAKLREKQEVAAPNYPELGTKSFEVSEKQDIYTS
PEPREISTLPLIPTKSQPAESSPYLEAENTPTPVRKRGRPRKQKVHRIPS
DTQTAPVVASVGNERNDKSGTKRSRGRPYKPKGERHENNDIISPETGGSA
DGTLKASDMPLKRKRGRPRSISVEVERMIVADSMKSISGNTPNSAANPRK
RGRPRGSKNKPKSTNTASRIPFDIPRDNIPATTDEQSELDLTEMFEMYNK
HYIRDFQRSRRQNWKEENLRAPNGLPESGPEDLIFELMPIFAKLEAEKNR
IITEKEKNIRRFIDKTFHQFASSHRSDRRQLNLKPFKLREDEKKVCAECE
GVGMLRCEYCEGFGFVDFGENGEKFYEEFGTDNVTLPKQIMGTMYHCPSC
DGSTQVECSDCSGTGSMEDLLPRKSGASRTPVNNYAKDEFDIEKFLEEEK
DRVEIGLDGTIVLRARRRRGGKEGSHGVKRKSDSGRNEKQSGLQEPDRSP
PINRSHRSSPAMERLRDFIQKNKRDLFQEPSNEVNGRISRAKSSGTDFIN
TTDFKVGRNLRNRKPIHFSSKKKVEKNQGNSGGEQLRNEKLFGQEYRTEN
LKNL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017956	AT_hook_DNA-bd_motif
IPR036410	HSP_DnaJ_Cys-rich_dom_sf