Gchil7455.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7455.t1
Unique NameGchil7455.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length211
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1296100..1296732 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7455Gchil7455Gracilaria chilensis NLEC103_M9 malegenetig00000007_pilon 1296100..1296732 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7455.t1.stop1Gchil7455.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000007_pilon 1296100..1296102 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7455.t1.CDS1Gchil7455.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000007_pilon 1296100..1296732 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7455.t1.exon1Gchil7455.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000007_pilon 1296100..1296732 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7455.t1.start1Gchil7455.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000007_pilon 1296730..1296732 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7455.t1Gchil7455.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000007_pilon 1296100..1296732 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7455.t1 ID=Gchil7455.t1|Name=Gchil7455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=211bp
MENVAPQTLRHASRQRKPFGNLSRQEGKLALHDSNHKGTQGKRRALGDIT
NRAGEKSNDIALPNVKPNSTVSLKLDGKSAIRDKAILNTSTGKFKIPTDI
FGDVLHPEIIPAPIPELPYTPVLFEDGELENARQKLKEQAAMEDDDTFDF
MGRPYVRTELKFQKEVEMPYDPVEMMNDTNERDLLDFTNLDLFNPDQLIP
NDEYSTLELV*
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spliced messenger RNA

>Gchil7455.t1 ID=Gchil7455.t1|Name=Gchil7455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000007_pilon:1296100..1296732- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGAATGTGGCACCACAAACACTGCGCCATGCATCCAGACAAAGGAA
GCCTTTTGGTAATCTGTCTCGACAAGAGGGAAAGCTAGCACTTCACGATT
CCAACCACAAGGGAACCCAAGGAAAGCGGCGCGCGTTAGGAGACATAACG
AATAGAGCTGGTGAAAAGAGCAACGATATTGCTTTGCCCAACGTGAAACC
CAACTCCACCGTTTCGCTCAAGCTTGATGGAAAGAGCGCAATCAGAGACA
AGGCAATTCTCAACACTTCCACCGGAAAATTCAAAATCCCCACAGACATC
TTTGGAGACGTTTTGCACCCAGAGATTATTCCAGCCCCCATTCCCGAACT
TCCTTACACGCCCGTGCTGTTTGAAGATGGTGAGTTGGAAAATGCACGCC
AGAAACTGAAAGAGCAAGCTGCAATGGAGGATGATGATACATTTGACTTC
ATGGGAAGGCCGTACGTGAGAACAGAGCTCAAGTTTCAGAAAGAAGTTGA
AATGCCATATGATCCCGTTGAAATGATGAATGATACAAACGAGAGAGATT
TATTGGACTTCACCAATCTTGACTTGTTCAATCCGGACCAGCTTATTCCA
AACGATGAGTACTCTACGCTCGAGCTGGTATGA
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protein sequence of Gchil7455.t1

>Gchil7455.t1 ID=Gchil7455.t1|Name=Gchil7455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=211bp
MENVAPQTLRHASRQRKPFGNLSRQEGKLALHDSNHKGTQGKRRALGDIT
NRAGEKSNDIALPNVKPNSTVSLKLDGKSAIRDKAILNTSTGKFKIPTDI
FGDVLHPEIIPAPIPELPYTPVLFEDGELENARQKLKEQAAMEDDDTFDF
MGRPYVRTELKFQKEVEMPYDPVEMMNDTNERDLLDFTNLDLFNPDQLIP
NDEYSTLELV*
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mRNA from alignment at tig00000007_pilon:1296100..1296732-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7455.t1 ID=Gchil7455.t1|Name=Gchil7455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=633bp|location=Sequence derived from alignment at tig00000007_pilon:1296100..1296732- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGAATGTGGCACCACAAACACTGCGCCATGCATCCAGACAAAGGAA
GCCTTTTGGTAATCTGTCTCGACAAGAGGGAAAGCTAGCACTTCACGATT
CCAACCACAAGGGAACCCAAGGAAAGCGGCGCGCGTTAGGAGACATAACG
AATAGAGCTGGTGAAAAGAGCAACGATATTGCTTTGCCCAACGTGAAACC
CAACTCCACCGTTTCGCTCAAGCTTGATGGAAAGAGCGCAATCAGAGACA
AGGCAATTCTCAACACTTCCACCGGAAAATTCAAAATCCCCACAGACATC
TTTGGAGACGTTTTGCACCCAGAGATTATTCCAGCCCCCATTCCCGAACT
TCCTTACACGCCCGTGCTGTTTGAAGATGGTGAGTTGGAAAATGCACGCC
AGAAACTGAAAGAGCAAGCTGCAATGGAGGATGATGATACATTTGACTTC
ATGGGAAGGCCGTACGTGAGAACAGAGCTCAAGTTTCAGAAAGAAGTTGA
AATGCCATATGATCCCGTTGAAATGATGAATGATACAAACGAGAGAGATT
TATTGGACTTCACCAATCTTGACTTGTTCAATCCGGACCAGCTTATTCCA
AACGATGAGTACTCTACGCTCGAGCTGGTATGA
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Coding sequence (CDS) from alignment at tig00000007_pilon:1296100..1296732-

>Gchil7455.t1 ID=Gchil7455.t1|Name=Gchil7455.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=633bp|location=Sequence derived from alignment at tig00000007_pilon:1296100..1296732- (Gracilaria chilensis NLEC103_M9 male)
ATGGAGAATGTGGCACCACAAACACTGCGCCATGCATCCAGACAAAGGAA
GCCTTTTGGTAATCTGTCTCGACAAGAGGGAAAGCTAGCACTTCACGATT
CCAACCACAAGGGAACCCAAGGAAAGCGGCGCGCGTTAGGAGACATAACG
AATAGAGCTGGTGAAAAGAGCAACGATATTGCTTTGCCCAACGTGAAACC
CAACTCCACCGTTTCGCTCAAGCTTGATGGAAAGAGCGCAATCAGAGACA
AGGCAATTCTCAACACTTCCACCGGAAAATTCAAAATCCCCACAGACATC
TTTGGAGACGTTTTGCACCCAGAGATTATTCCAGCCCCCATTCCCGAACT
TCCTTACACGCCCGTGCTGTTTGAAGATGGTGAGTTGGAAAATGCACGCC
AGAAACTGAAAGAGCAAGCTGCAATGGAGGATGATGATACATTTGACTTC
ATGGGAAGGCCGTACGTGAGAACAGAGCTCAAGTTTCAGAAAGAAGTTGA
AATGCCATATGATCCCGTTGAAATGATGAATGATACAAACGAGAGAGATT
TATTGGACTTCACCAATCTTGACTTGTTCAATCCGGACCAGCTTATTCCA
AACGATGAGTACTCTACGCTCGAGCTGGTATGA
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