Gchil7552.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7552.t1
Unique NameGchil7552.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length235
Homology
BLAST of Gchil7552.t1 vs. uniprot
Match: A0A2V3J3L8_9FLOR (Stromal cell-derived factor 2-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L8_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 2.720e-83
Identity = 124/184 (67.39%), Postives = 147/184 (79.89%), Query Frame = 0
Query:   10 VTLAYFCISVCATDEQVTEITYGSTIKLEHVASKHRLHSHDIKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQSKKSN 193
            V LA F  S+ A D +VT++TYGSTIKLEHV++KHRLHSH++KY TGSQQQSVTAVSDT+DSNS W V+NAH +D ++ GT V CG   RLQHL TGKNLHSHKH+APLN DYEVSA+GE+ GRWS+GD GDNW ++C  GSG WKRGA VRL HVDTG  LS+N +LKF+Q I  QQQ   S+
Sbjct:   15 VLLALFTRSL-AEDTEVTDVTYGSTIKLEHVSTKHRLHSHEVKYVTGSQQQSVTAVSDTADSNSLWTVKNAHQADPIMPGTPVLCGHTIRLQHLRTGKNLHSHKHRAPLNGDYEVSAFGELTGRWSDGDKGDNWTIECTTGSGPWKRGANVRLRHVDTGTLLSSNSNLKFRQPIPDQQQVSASS 197          
BLAST of Gchil7552.t1 vs. uniprot
Match: R7QRP9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP9_CHOCR)

HSP 1 Score: 200 bits (508), Expect = 1.360e-60
Identity = 102/189 (53.97%), Postives = 133/189 (70.37%), Query Frame = 0
Query:   12 LAYFCISVCATDEQVTEI-TYGSTIKLEHVASKHRLHSHDIKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYG-EMNGRWSEGDTGDNWVLDCL-QGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQSKKSNGMSA 197
            L++  +++ + DE+  EI TYGSTIKLEHV +  RLHSHD+ YG+GS QQSVT   D  DSNS+W+V+ AHG+   LAG  V+CGD  RLQHLNTGKNLHSH H+AP+N D EVSAY  + +GRW  GDT DNWVL+C+ +G+  WKR   VR  H + G +L+ +  LKF++ I GQ Q   S+  +A
Sbjct:   53 LSHLYVTLASDDEEPVEIVTYGSTIKLEHVPTGVRLHSHDVSYGSGSGQQSVTGFHDAGDSNSYWIVKAAHGAARRLAGEPVKCGDWVRLQHLNTGKNLHSHDHRAPMNADAEVSAYALQKDGRWFNGDTADNWVLECVARGAAQWKRFEHVRFKHQEGGKWLAADARLKFREPIPGQLQVSGSSRQNA 241          
BLAST of Gchil7552.t1 vs. uniprot
Match: A0A8J4PVZ1_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVZ1_9MYCE)

HSP 1 Score: 162 bits (409), Expect = 2.640e-46
Identity = 94/201 (46.77%), Postives = 127/201 (63.18%), Query Frame = 0
Query:    3 LRNSLLGVTLAYFCISVCAT---DEQVTEITYGSTIKLEHVASKHRLHSHDIKYGTG---SQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQ----SKKSN 193
            +  +L+G+     CISV      D+ ++++TYGS IKL H  S+ RLHSH + YG+G   S QQSVT   +  DSNSFWV++  HG + +  GTVV+ GD+ RL H+NT KNLHSH   +PL R  EVS +G+ NG   EGDTGDNW +  ++G   W RG  VR +HVDT  YL  +P+ K++  I GQ +    SKKS+
Sbjct:    2 ISKTLIGLLFISICISVAFCEYEDDSISKVTYGSVIKLSHKTSQFRLHSHKVSYGSGNGGSGQQSVTGFPENDDSNSFWVIKAKHG-ERVQQGTVVKNGDIIRLSHVNTKKNLHSHLSVSPLTRQNEVSCFGD-NG---EGDTGDNWEVQ-VEGK-EWMRGQPVRFYHVDTKAYLHASPNSKYQNPIPGQIEVAGSSKKSD 195          
BLAST of Gchil7552.t1 vs. uniprot
Match: F4PN60_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PN60_CAVFA)

HSP 1 Score: 164 bits (416), Expect = 7.210e-44
Identity = 86/178 (48.31%), Postives = 115/178 (64.61%), Query Frame = 0
Query:   23 DEQVTEITYGSTIKLEHVASKHRLHSHDIKYGTG---SQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQ----SKKSN 193
            D  +T++TYGS IKL H  SK+RLHSH + YG+G   S QQSVT  +D +D NS WV++ AHG +    G VV+ GD  RL HLNT KNLHSH   +PL ++ EVS +GE      +GD GDNW ++ + GS  W RG  +RL+H+DT +YL  NP+ K++  I GQ +    +KK N
Sbjct:  394 DHAITKVTYGSIIKLLHSNSKYRLHSHKVSYGSGNGGSGQQSVTGFADGNDPNSLWVIKGAHGENQP-QGKVVKKGDTIRLLHLNTKKNLHSHAAVSPLTKNNEVSCFGEEG----QGDGGDNWRVETIDGSDIWMRGQPIRLYHLDTKFYLHANPNAKYQHPIPGQMEVCGIAKKDN 566          
BLAST of Gchil7552.t1 vs. uniprot
Match: A0A0L0DXJ2_THETB (Mannosyltransferase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DXJ2_THETB)

HSP 1 Score: 153 bits (386), Expect = 7.180e-43
Identity = 84/180 (46.67%), Postives = 115/180 (63.89%), Query Frame = 0
Query:    8 LGVTLAYFCISVCAT-DEQVTEITYGSTIKLEHVASKHRLHSHDIKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQ 186
            +  TLA   + V A  DE+   +T GS IKL H ++ +RLHSHDI YG+GSQQQSVTA     D+NS W V+   G  +   G V++ GDV RLQH+NT K LHSH H++PL+++ EVSAYG  +    + D+GDNW+++   G+  W RGA +RL H DTG YL ++    ++  I GQ
Sbjct:   11 IAATLALSVVPVQAEIDEEFRMVTCGSVIKLRHASTGYRLHSHDIPYGSGSQQQSVTAHPAADDTNSLWTVKAGFGYPACKHGDVIKSGDVIRLQHVNTKKYLHSHLHRSPLSQNQEVSAYGSSD----QSDSGDNWIVE---GAAKWLRGAKLRLKHKDTGAYLHSHRKA-YQNPIPGQ 182          
BLAST of Gchil7552.t1 vs. uniprot
Match: SDF2_DICDI (Stromal cell-derived factor 2-like protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SDF2_DICDI)

HSP 1 Score: 153 bits (386), Expect = 7.610e-43
Identity = 82/167 (49.10%), Postives = 105/167 (62.87%), Query Frame = 0
Query:   23 DEQVTEITYGSTIKLEHVASKHRLHSHDIKYGT---GSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQ 186
            D  +T++TYGS +KL HV +  RLHSH + YG+   GS QQSVT   +  D+NS WV++  HG+  +L GTVV+ GD+ RL H NT KNLHSH   +PL +  EVS +GE NG   EGDTGDNW+++   G   W RG  VR  H DT  YL    S K++  I GQ
Sbjct:   26 DHPITKVTYGSMVKLAHVPTNFRLHSHKVSYGSSGGGSGQQSVTGFPENDDTNSLWVIKGPHGN-RVLQGTVVKNGDIIRLVHSNTKKNLHSHLAVSPLTKQNEVSCFGE-NG---EGDTGDNWIVETESGK-EWMRGQVVRFKHADTKTYLQAIESAKYQNPIPGQ 186          
BLAST of Gchil7552.t1 vs. uniprot
Match: UPI000644BBBB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644BBBB)

HSP 1 Score: 152 bits (385), Expect = 1.390e-42
Identity = 84/189 (44.44%), Postives = 116/189 (61.38%), Query Frame = 0
Query:    1 MILRNSLLGVTLAYFCISVCATDEQVTEITYGSTIKLEHVASKHRLHSHDIKYGT---GSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQ 186
            ++L  +LL +   +  +S    D  ++ +TYGS IKL HVA+K RLHSH + YG+   GS QQSVT   +  D+NS W+++  HG      GT+++ GD  RL HLNT KNLHSH   +PL ++ EVS +GE NG   EGDTGDNWV++ +     W R    RL HVDT  YL+ + + K++  I GQ
Sbjct:    9 LLLVATLLVLLSTFNIVSADYEDHAISTVTYGSIIKLGHVATKFRLHSHKVAYGSQGGGSGQQSVTGFPENDDTNSLWMIKGPHGQYRQ-QGTIIKNGDTIRLIHLNTRKNLHSHLAVSPLTKNNEVSCFGE-NG---EGDTGDNWVVELIDAGDQWTRDVEFRLKHVDTKAYLTASANYKYQHPIPGQ 192          
BLAST of Gchil7552.t1 vs. uniprot
Match: D7U863_VITVI (Uncharacterized protein n=2 Tax=Vitis TaxID=3603 RepID=D7U863_VITVI)

HSP 1 Score: 152 bits (384), Expect = 1.610e-42
Identity = 84/165 (50.91%), Postives = 111/165 (67.27%), Query Frame = 0
Query:   25 QVTEITYGSTIKLEHVASKHRLHSHDIKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSG-SWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQ 188
            Q  EITYGSTIKL H  ++ RLHSHD+ YG+GS QQSVTA  +  DSNS+W+VR   GS S   G  ++ G + RLQH+ T K LHSH H +P++ + EVS YGE +      DTGDNW L+ ++GSG +WK+   VRL HVDTG YL ++   K+ ++  GQQ+
Sbjct:   31 QGVEITYGSTIKLMHERTRFRLHSHDVPYGSGSGQQSVTAFPNVDDSNSYWIVRPLLGSSSK-QGDSIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCYGEDD----NSDTGDNWRLE-IEGSGKTWKQDQRVRLLHVDTGGYLHSHDK-KYTRIAGGQQE 188          
BLAST of Gchil7552.t1 vs. uniprot
Match: A0A7S0HEB0_9CRYP (Hypothetical protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0HEB0_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 2.030e-42
Identity = 87/196 (44.39%), Postives = 119/196 (60.71%), Query Frame = 0
Query:    3 LRNSLLGVTLAYFCISVCATDEQVTE---ITYGSTIKLEHVASKHRLHSHDIKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQ-------VIAGQQQ 188
            +R+S+L  +L      V A D++  E   +T GS I L HV S++RLHSH++ YG+GS+QQSVTAV+  +D NS WVVR  HG      GT ++ GD  RL HLNT +NLHSH  ++PL++  EVS +GE     S GDTGD W+++ ++    WKRG   RL H  TG YL ++   +F Q        I GQQ+
Sbjct:    3 MRSSILAASLLLALTVVNANDDEGQEFEVVTCGSAINLVHVQSRYRLHSHEVAYGSGSRQQSVTAVNFLADPNSLWVVRGEHGKHCP-QGTQIKNGDTIRLSHLNTKRNLHSHFFESPLSKQQEVSGFGEK----SSGDTGDEWIIE-MKDEDHWKRGKRFRLKHKATGAYLHSHSHFRFNQNNCGGNCPIQGQQE 192          
BLAST of Gchil7552.t1 vs. uniprot
Match: D3B3G5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3G5_POLPP)

HSP 1 Score: 151 bits (382), Expect = 3.220e-42
Identity = 81/167 (48.50%), Postives = 106/167 (63.47%), Query Frame = 0
Query:   23 DEQVTEITYGSTIKLEHVASKHRLHSHDIKYGT---GSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRLQHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQGSGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQ 186
            D  +T++TYGS +KL HV +K RLHSH + YG    GS QQSVT   D  D+NS W ++ AHG +    GT+V+ GD  RL HLNT KNLHSH   +PL ++ EVS +GE NG   EGDTGDNW ++ +  S  W R +  RL H+DT  Y+  N + K++  I GQ
Sbjct:   25 DHAITKVTYGSIVKLGHVPTKFRLHSHKVSYGNTGGGSGQQSVTGFPDNDDTNSLWTIKAAHG-EYKPQGTIVKNGDTIRLIHLNTKKNLHSHLAVSPLTKNNEVSCFGE-NG---EGDTGDNWKVELID-SKEWNRSSVFRLQHIDTKAYMVANANAKYQHPIPGQ 185          
The following BLAST results are available for this feature:
BLAST of Gchil7552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3L8_9FLOR2.720e-8367.39Stromal cell-derived factor 2-like protein n=1 Tax... [more]
R7QRP9_CHOCR1.360e-6053.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A8J4PVZ1_9MYCE2.640e-4646.77Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
F4PN60_CAVFA7.210e-4448.31Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
A0A0L0DXJ2_THETB7.180e-4346.67Mannosyltransferase n=1 Tax=Thecamonas trahens ATC... [more]
SDF2_DICDI7.610e-4349.10Stromal cell-derived factor 2-like protein n=1 Tax... [more]
UPI000644BBBB1.390e-4244.44hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D7U863_VITVI1.610e-4250.91Uncharacterized protein n=2 Tax=Vitis TaxID=3603 R... [more]
A0A7S0HEB0_9CRYP2.030e-4244.39Hypothetical protein n=2 Tax=Geminigeraceae TaxID=... [more]
D3B3G5_POLPP3.220e-4248.50Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016093MIR motifSMARTSM00472mir_2coord: 89..148
e-value: 3.6E-12
score: 56.4
coord: 26..80
e-value: 1.7E-7
score: 40.9
coord: 151..204
e-value: 48.0
score: 1.8
IPR016093MIR motifPFAMPF02815MIRcoord: 47..127
e-value: 2.7E-11
score: 43.7
IPR016093MIR motifPROSITEPS50919MIRcoord: 26..80
score: 14.696164
IPR016093MIR motifPROSITEPS50919MIRcoord: 89..148
score: 13.81514
NoneNo IPR availableGENE3D2.80.10.50coord: 15..199
e-value: 2.7E-51
score: 175.8
NoneNo IPR availablePANTHERPTHR46809STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEINcoord: 15..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..234
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
IPR036300Mir domain superfamilySUPERFAMILY82109MIR domaincoord: 28..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1872491..1873933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7552.t1Gchil7552.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1872491..1873933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7552.t1 ID=Gchil7552.t1|Name=Gchil7552.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=235bp
MILRNSLLGVTLAYFCISVCATDEQVTEITYGSTIKLEHVASKHRLHSHD
IKYGTGSQQQSVTAVSDTSDSNSFWVVRNAHGSDSLLAGTVVRCGDVFRL
QHLNTGKNLHSHKHQAPLNRDYEVSAYGEMNGRWSEGDTGDNWVLDCLQG
SGSWKRGATVRLHHVDTGYYLSTNPSLKFKQVIAGQQQSKKSNGMSAEFF
SELMSSDIEIITLASNCSGQGSLGLAEGFLLDTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016093MIR_motif
IPR036300MIR_dom_sf