Gchil7550.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7550.t1
Unique NameGchil7550.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length523
Homology
BLAST of Gchil7550.t1 vs. uniprot
Match: A0A2V3J3A1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A1_9FLOR)

HSP 1 Score: 322 bits (825), Expect = 2.170e-100
Identity = 170/342 (49.71%), Postives = 237/342 (69.30%), Query Frame = 0
Query:  137 YELEDEKHRQSLIEKITKLIQRHHDLAATRKSLRDSSMKESKSYDEVMRRRNALSQDWENVHRAKLRVENDLDFFNTHIELQDETLMQLASQTKDNAFLMDKLKKKYAHLLKDKTQLAEYFREHGLEHWVENSVKGTVNPIVLDAIMQGTGYVVEPMLDGIEKLASMNDEVVTAVSKRLKTQTSLANYPFYSGFVSYAVLLCPLVIMVSILTRVKKGISRLSRTHWIILGTFYFVMVTGGFLAATMFGSVDVLQTFKLHNVHVFNSVLVLHGLAFLVYVLLHFYNMIQVPRQEAVSHFLVVALIAVHFFIRSQEQSLTAEGLQVDVWTYFVYSAVLSFVLYE 478
            Y LE+   RQ L+ K+  L+QRH +L    +S  D+ MK S ++ E + RRNALSQ  E   RA+L VE D+++F  H  LQ+E+L  L SQ      LM+KL ++Y   LKD+  L E FREHGLEHWVE+S++ ++NP+VLDAIMQGT YVVEPML+GIEKLA++NDE+   VS+RLK + S+A  PFYSGFVSY VLLCPLVI++S+LTR+++  S+LS  H IIL + Y+ ++T G L A + GSVDVLQTF+ +++H+FN +LV H   +++ V+LH +  +     +   HFL++A I   F   ++ Q+L  + L+VD W Y VY+AVL FVL+E
Sbjct:  163 YALEEGPRRQVLVSKVVSLLQRHRELGRLLESKNDAIMKISNAFAESLHRRNALSQATETARRARLLVERDIEYFKGHAVLQEESLNHLKSQVSKAKVLMNKLVERYNRGLKDEEHLKERFREHGLEHWVESSMRQSLNPVVLDAIMQGTEYVVEPMLEGIEKLATVNDEIADTVSQRLKNRISMAQKPFYSGFVSYTVLLCPLVILMSVLTRIRRSFSQLSSMHLIILMSLYYTLLTLGCLLALLIGSVDVLQTFRSNHLHLFNFLLVFHSSVYILLVVLHLFRSVMFRSIDGFGHFLILAAIGGQFINDAERQTLANQSLRVDPWVYLVYTAVLCFVLFE 504          
BLAST of Gchil7550.t1 vs. uniprot
Match: R7Q748_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q748_CHOCR)

HSP 1 Score: 198 bits (504), Expect = 2.610e-53
Identity = 116/308 (37.66%), Postives = 181/308 (58.77%), Query Frame = 0
Query:  185 RRRNALSQDWENVHRA-----KLRVENDL-DFFNTHIEL-------QDETLMQLASQTKDNAFLMDKLKKKYAHLLKDKTQLAEYFREHGLEHWVENSVKGTVNPIVLDAIMQGTGYVVEPMLDGIEKLASMNDEVVTAVSKRLKTQTSLANYPFYSGFVSYAVLLCPLVIMVSILTRVKKGISRLSRTHWIILGTFYFVMVTGGFLAATMFGSVDVLQTFKLHNVHVFNSVLVLHGLAFLVYVLLHFYNMIQVPRQEAVSHFLVVALIAVHFFIRSQEQSLTAEGLQVDVWTYFVYSAVLSFVLYET 479
            RR++A+    +++HR      + R  +DL D  + HI          + TL  L  Q  D    +D+L+     L++   +LA+  RE GLEHWVENSVK TV P V DA++QGT  VVEP+LDGIE LA +N  +   + + L+ +  +   PFY+GFV+Y VLL P V++ S++ +VK+GISRLS  H +ILG  YF++++ G   AT+ G+VDVL TF+ +N+  F+  +V+HGL ++ +V      +     +  + H L++ ++ +HFF+ S   ++  E   VD   Y  Y+ +  FVLYE+
Sbjct:  124 RRQHAIDSLHDSMHRKNTILLETRTADDLKDDLHLHIAQLTNRLARYERTLTILTDQEYDAKRAVDRLRGHVFSLMRHNARLADALRERGLEHWVENSVKDTVGPFVSDALVQGTASVVEPVLDGIETLALVNGHLSDTMKQTLRHRVPIVEKPFYAGFVTYVVLLAPTVLVASLVMKVKRGISRLSLRHVVILGNLYFLLLSAGCFVATLLGAVDVLFTFRHYNLRFFDFAMVIHGLLYVSHVFGQVRLLWLTRERGGIIHVLLLCIVGLHFFVHSYRHAMHHEDPHVDKRAYLFYTGIFLFVLYES 431          
The following BLAST results are available for this feature:
BLAST of Gchil7550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3A1_9FLOR2.170e-10049.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q748_CHOCR2.610e-5337.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..139
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 430..446
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 362..383
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..350
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 424..429
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 447..461
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 403..423
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 351..361
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 384..402
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 462..481
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 482..522
NoneNo IPR availableTMHMMTMhelixcoord: 430..447
NoneNo IPR availableTMHMMTMhelixcoord: 326..348
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 462..481
NoneNo IPR availableTMHMMTMhelixcoord: 398..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1868944..1870512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7550.t1Gchil7550.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1868944..1870512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7550.t1 ID=Gchil7550.t1|Name=Gchil7550.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=523bp
MIIFHNLFGALLVVLIFLAPTESSIQSSEELAGPSIEQEFERRNMSHEED
KNGKETIREQTSDLDESNMDNQKTLSHPEGRRPVSKIRKKVVHDEKKKRG
SKSKGTKGFATEVGLQTYNDENEDDPHDREDSSHENYELEDEKHRQSLIE
KITKLIQRHHDLAATRKSLRDSSMKESKSYDEVMRRRNALSQDWENVHRA
KLRVENDLDFFNTHIELQDETLMQLASQTKDNAFLMDKLKKKYAHLLKDK
TQLAEYFREHGLEHWVENSVKGTVNPIVLDAIMQGTGYVVEPMLDGIEKL
ASMNDEVVTAVSKRLKTQTSLANYPFYSGFVSYAVLLCPLVIMVSILTRV
KKGISRLSRTHWIILGTFYFVMVTGGFLAATMFGSVDVLQTFKLHNVHVF
NSVLVLHGLAFLVYVLLHFYNMIQVPRQEAVSHFLVVALIAVHFFIRSQE
QSLTAEGLQVDVWTYFVYSAVLSFVLYETFFKKGTSSRHCQKGSTEESFA
KTNWVSVSSSNLRISAVHASGD*
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