Gchil333.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil333.t1
Unique NameGchil333.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length246
Homology
BLAST of Gchil333.t1 vs. uniprot
Match: A0A2V3IL71_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL71_9FLOR)

HSP 1 Score: 174 bits (441), Expect = 2.440e-50
Identity = 97/238 (40.76%), Postives = 144/238 (60.50%), Query Frame = 0
Query:   13 LAVVAALPLEDLAKLNIVKEVEFIDNAVRADLNFQT-------NSSQVIDQFSVGSGRVTSANLRCSGICKASMSYNFTLNGISSEYLANKDSLFRETLNSSQTTKYDQAKKNYGGGLNVPFLRAVGLNLGGSYSRENVDEASQRLENYDSLADAARSIMESFEMVTVRVWGTMTVASYTAMRSEAVAWVKFAKVTLLDGTQLRVVSASGADVSVTDENGNGSNMLTEDWVGGAEQKT 243
            L + +ALPLEDL  + +VK+VE+ D+ V      +         S+ V  +FS+ +G V+ A+  C G+C+ ++ +N  LNG +S +L   D  F+  L SSQ   Y  +K+NYGGGL +PF+R +G NLG  Y+++NVD A + +ENYD LA+AARSI+ SF+  TVR+ GT+ + SY+ + S     +KFA+VTLLD + L V S+ G D+      G G   L      GA+Q+T
Sbjct:   14 LTLASALPLEDLKSVGVVKDVEYFDHQVPISSRSEIVGVPDKEESTYVAKRFSLSNGVVSRADSYCQGLCETTLHFNMVLNGAASSFLEKTDRKFQSALTSSQKEIYANSKRNYGGGLRIPFMRVLGFNLGARYTKQNVDNAREHIENYDELANAARSILSSFQNATVRIKGTVRIRSYSQIPSRGYVSIKFARVTLLDSSVLNVFSSLGEDL------GTGRGTLENLSGAGAQQET 245          
BLAST of Gchil333.t1 vs. uniprot
Match: A0A2V3IL72_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL72_9FLOR)

HSP 1 Score: 117 bits (293), Expect = 2.420e-28
Identity = 74/205 (36.10%), Postives = 121/205 (59.02%), Query Frame = 0
Query:   22 EDLAKLNIVKEVEFIDNAVRADLNFQTNSSQVIDQFSVGSGRVTSANLRCSGICKASMSYNFTLNGISSEYLANKDSLFRETLNSSQTTKYDQAKKNYGGGLNVPFLRAVGLNLGGSYSRENVDEASQRLENYDSLADAARSIMESFEMVTVRVWGTMTVASYTAMRSEAVAWVKFAKVTLLDGTQLRVVSASGADVSVTDENGN 226
             +L  L +VK VE I + +R  + ++   +QV+   ++  G +  A L      +AS S+N+ ++G++S YLA  D +F  T+NS +   Y++AK+ Y GGL++PFLR +G++L  S+S +       R + Y   A AAR IM+SF    +R+ GT++V   +   S A  +VKF++VTL+D T L VVS++  DV   D++ N
Sbjct:   25 SNLQNLALVKTVEHIHHELREVVKYE-RETQVLSDHALLFGPIGQATLNVRLGLRASFSFNYRIDGVTSAYLAASDHIFTSTMNSRERILYEEAKRGYNGGLDIPFLRQLGIHLNESHSLDA--NLVSRDDYYALKAIAARQIMQSFRGGKLRINGTISVIGVSEQPSTARVFVKFSRVTLVDNTVLHVVSSNNDDVVAGDDSHN 226          
BLAST of Gchil333.t1 vs. uniprot
Match: R7Q301_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q301_CHOCR)

HSP 1 Score: 71.6 bits (174), Expect = 4.230e-12
Identity = 39/128 (30.47%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   98 SLFRETLNSSQTTKYDQAKKNYGGGLNVPFLRAVGLNLGGSYSRENVDEASQRLENYDSLADAARSIMESFEMVTVRVWGTMTVASYTAMRSEAVAWVKFAKVTLLDGTQLRVVSASGADVSVTDENG 225
            S F ETL + +  ++++   N+ G L +P    +GLN   S S E + EA++ +EN+++   A   I+ES     +R+ GT++    + + + A A+++   V+  DG+ L VVS +  DV   D +G
Sbjct:    3 STFVETLTAEERVQFEELVSNFDGSLKLPIFELLGLNFAESISTEQIAEAAESIENFETKTTAIEEILESVVDSEIRITGTLSATGQSNIPTVAFAFIEVTDVSFDDGSNLLVVSNNPNDVVAADIDG 130          
The following BLAST results are available for this feature:
BLAST of Gchil333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IL71_9FLOR2.440e-5040.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IL72_9FLOR2.420e-2836.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q301_CHOCR4.230e-1230.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:258253..258990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil333.t1Gchil333.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000212_pilon 258253..258990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil333.t1 ID=Gchil333.t1|Name=Gchil333.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=246bp
MMAISCFFGALMLAVVAALPLEDLAKLNIVKEVEFIDNAVRADLNFQTNS
SQVIDQFSVGSGRVTSANLRCSGICKASMSYNFTLNGISSEYLANKDSLF
RETLNSSQTTKYDQAKKNYGGGLNVPFLRAVGLNLGGSYSRENVDEASQR
LENYDSLADAARSIMESFEMVTVRVWGTMTVASYTAMRSEAVAWVKFAKV
TLLDGTQLRVVSASGADVSVTDENGNGSNMLTEDWVGGAEQKTDG*
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