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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 55529.EKX39035 |
| Preferred name | TRPC4AP |
| PFAMs | DUF3689 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K11796 |
| GOs | GO:0000151,GO:0001942,GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0007275,GO:0008150,GO:0008152,GO:0008324,GO:0008544,GO:0009056,GO:0009057,GO:0009888,GO:0009987,GO:0015075,GO:0015085,GO:0015267,GO:0015318,GO:0016020,GO:0016567,GO:0019538,GO:0019899,GO:0019902,GO:0019941,GO:0021700,GO:0022404,GO:0022405,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030163,GO:0031461,GO:0031464,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0036211,GO:0042303,GO:0042633,GO:0043170,GO:0043412,GO:0043588,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0046873,GO:0048513,GO:0048731,GO:0048820,GO:0048856,GO:0051179,GO:0051234,GO:0051603,GO:0055085,GO:0060429,GO:0070588,GO:0070647,GO:0070838,GO:0071695,GO:0071704,GO:0071944,GO:0072511,GO:0080008,GO:0098655,GO:0098660,GO:0098662,GO:0098773,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234 |
| Evalue | 1.1e-38 |
| EggNOG OGs | 2CMDE@1|root,2QQ1C@2759|Eukaryota |
| Description | hair follicle maturation |
| COG category | S |
| BRITE | ko00000,ko01009,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil6309.t1 ID=Gchil6309.t1|Name=Gchil6309.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=806bp MFDKASTELSLTIIEELLHVNNIVDLSTIPNLHHTLLDLSPIQLGHACRV LATLVDDRTEPSLCGGDYCVGNCLAYYGWRPVEDSAVHLRLRRSYVRANR VVRDRNHAALLFVPGLLKRLVKLIFVPPATRSDLLAVDYAVKAGMFQSSI DPVEFANDGQELLNIPPDVRHQLELAIRPGLDSQDAHFTGADCWQTLNRR IALSNPSTNHHVVPFSDANNLLVVSPHTSAAEQSLSPAYSHPTQIAMYSE NPAHANIFYSHIPSLSGAPDDLYPTGRVVSISTMIMSSHQIDVLFVLYSM LMCKRKADVRRQLIDAGIFDALNRFCDALDWSDCPQETQTEDSLKMHFIK LVHSICESSDDNVMVVRNRLMFSEHERQILAAMEQGCEFHSLPCASPASV TSSELPPIERLSLSSPAPPLSSPTDSTGEGPASKVSYVFPHRARSANDMP FMDRGSLADEPFSLSGSPRVNSAYSAPTTPLSKARSRVVRDAPEKKGLLT KLIGIYMLTKRDDEVSRTRRYLLSACIETFQRSATLCEKTFVARQGLLRH LVEQLAMFTAPKSQIVVFRQTSFDLLSQLIKWNRTLFRELNEILRADRVV LERLLTAVSDRLVDSNVFVRSIALSLERFRAEDELVPDNGQAYEFDICVL WEFIETYRVRLMYDMISSVRVEDITFENVCCVNTALILFVISCRDEETLD NVLSKLSNMVVEFAMSTKTSDYSVKSILPADVMDNFCKLVNFWLNYYRYQ AADVSSLEVNTNISFDLFVETATRLRDRLPVYDKHVRRKIRAEGKGAKDF MACIE* back to topspliced messenger RNA >Gchil6309.t1 ID=Gchil6309.t1|Name=Gchil6309.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2418bp|location=Sequence derived from alignment at tig00000196_pilon:72352..74769- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCGACAAGGCCAGCACCGAGCTATCCCTCACTATCATCGAAGAACT TTTGCACGTGAACAATATCGTAGATCTTTCCACCATTCCAAACTTGCACC ACACCCTTCTAGACTTGTCTCCCATCCAACTCGGCCACGCCTGTAGAGTG CTTGCCACCCTCGTCGACGACCGCACCGAGCCCTCTCTTTGCGGTGGCGA CTACTGCGTCGGCAACTGCCTCGCGTACTACGGTTGGCGACCAGTTGAGG ATTCCGCTGTCCACCTCCGTCTGCGCCGCTCATACGTGCGCGCCAACCGA GTAGTGCGTGATCGCAATCACGCCGCACTACTCTTCGTACCCGGCCTGCT CAAGCGTCTGGTCAAGCTTATTTTTGTACCACCTGCCACGAGAAGCGATC TACTTGCAGTCGACTACGCCGTCAAAGCCGGCATGTTCCAAAGCTCCATA GATCCGGTTGAGTTTGCAAATGACGGTCAGGAGCTTCTCAACATACCGCC GGACGTAAGACACCAACTTGAACTCGCCATCCGACCCGGTTTGGATTCGC AGGATGCACACTTCACCGGTGCCGATTGTTGGCAAACGCTCAATAGAAGA ATTGCCTTGTCCAATCCGTCCACCAATCACCACGTTGTTCCTTTTTCTGA TGCCAATAACCTTCTTGTAGTCTCTCCACACACCTCCGCTGCCGAGCAGT CGCTATCTCCCGCGTACTCTCACCCCACACAAATCGCAATGTACAGTGAA AATCCCGCACACGCCAATATTTTTTACTCGCACATTCCTTCACTTTCCGG CGCACCGGACGATCTGTACCCCACAGGACGCGTCGTGTCCATCAGCACCA TGATCATGTCATCGCATCAGATTGACGTTCTGTTCGTTCTCTATTCTATG TTGATGTGCAAGCGCAAGGCTGACGTCCGAAGGCAGCTAATTGACGCGGG CATTTTCGATGCTCTCAATCGCTTTTGCGACGCGCTAGACTGGTCTGACT GCCCCCAAGAAACCCAAACTGAGGACTCATTGAAGATGCATTTTATCAAG CTTGTCCACTCTATTTGTGAGTCCTCCGATGACAACGTTATGGTAGTGCG TAACAGGCTCATGTTCAGCGAACATGAGCGCCAAATCCTGGCGGCTATGG AGCAAGGTTGTGAATTTCATTCACTTCCTTGTGCTTCCCCCGCTTCGGTC ACAAGCTCCGAACTACCGCCTATAGAGAGACTTTCTCTATCGTCACCTGC ACCACCCTTGTCCTCTCCGACGGATTCCACCGGAGAAGGCCCAGCTTCCA AGGTCTCATACGTGTTCCCGCACAGGGCGCGTTCTGCGAATGACATGCCC TTCATGGATAGAGGTTCTCTTGCGGATGAGCCGTTCAGTTTGTCGGGCAG CCCTAGGGTCAATAGTGCTTATAGTGCTCCAACTACCCCGCTGTCGAAAG CGCGCAGCCGCGTGGTGCGGGACGCTCCTGAAAAGAAGGGTTTGCTAACT AAACTTATCGGAATTTACATGCTGACAAAACGTGACGATGAAGTTTCTAG GACGCGACGGTACCTCTTGTCTGCGTGCATCGAAACTTTCCAACGAAGTG CTACATTGTGTGAAAAGACTTTTGTGGCACGTCAGGGTCTGCTTAGGCAT TTGGTTGAACAGCTTGCCATGTTCACTGCTCCCAAGTCGCAAATCGTCGT GTTCCGGCAGACAAGCTTTGATCTGCTGAGTCAGCTGATCAAATGGAATC GAACGTTATTTCGGGAGCTTAATGAAATACTGCGGGCCGACCGTGTAGTA CTGGAGCGGTTGCTGACAGCTGTTTCTGATCGTCTAGTGGATTCGAACGT GTTTGTACGCTCGATTGCCTTGTCCCTCGAACGATTTCGGGCAGAAGATG AGCTGGTTCCAGATAATGGTCAGGCGTATGAGTTTGATATTTGCGTGCTT TGGGAGTTCATCGAGACCTATAGGGTACGTCTGATGTATGATATGATATC AAGTGTGCGGGTAGAGGACATAACGTTTGAGAACGTTTGTTGTGTGAATA CGGCGCTGATCTTGTTTGTGATCTCATGCCGCGATGAAGAGACGTTGGAT AATGTGTTATCAAAGCTTTCGAACATGGTCGTCGAGTTTGCAATGTCGAC AAAGACGTCGGATTACTCTGTGAAGTCTATATTGCCTGCCGACGTGATGG ATAACTTTTGCAAGCTCGTAAACTTCTGGCTGAACTACTACCGATACCAA GCGGCAGATGTCTCGTCGTTGGAGGTGAATACGAATATCTCATTTGATCT TTTCGTTGAGACGGCAACTCGGTTGAGAGATCGGTTGCCCGTGTATGACA AACACGTGAGAAGGAAGATAAGGGCAGAAGGGAAGGGGGCCAAGGATTTC ATGGCATGTATAGAATGA back to topprotein sequence of Gchil6309.t1 >Gchil6309.t1 ID=Gchil6309.t1|Name=Gchil6309.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=806bp
MFDKASTELSLTIIEELLHVNNIVDLSTIPNLHHTLLDLSPIQLGHACRV LATLVDDRTEPSLCGGDYCVGNCLAYYGWRPVEDSAVHLRLRRSYVRANR VVRDRNHAALLFVPGLLKRLVKLIFVPPATRSDLLAVDYAVKAGMFQSSI DPVEFANDGQELLNIPPDVRHQLELAIRPGLDSQDAHFTGADCWQTLNRR IALSNPSTNHHVVPFSDANNLLVVSPHTSAAEQSLSPAYSHPTQIAMYSE NPAHANIFYSHIPSLSGAPDDLYPTGRVVSISTMIMSSHQIDVLFVLYSM LMCKRKADVRRQLIDAGIFDALNRFCDALDWSDCPQETQTEDSLKMHFIK LVHSICESSDDNVMVVRNRLMFSEHERQILAAMEQGCEFHSLPCASPASV TSSELPPIERLSLSSPAPPLSSPTDSTGEGPASKVSYVFPHRARSANDMP FMDRGSLADEPFSLSGSPRVNSAYSAPTTPLSKARSRVVRDAPEKKGLLT KLIGIYMLTKRDDEVSRTRRYLLSACIETFQRSATLCEKTFVARQGLLRH LVEQLAMFTAPKSQIVVFRQTSFDLLSQLIKWNRTLFRELNEILRADRVV LERLLTAVSDRLVDSNVFVRSIALSLERFRAEDELVPDNGQAYEFDICVL WEFIETYRVRLMYDMISSVRVEDITFENVCCVNTALILFVISCRDEETLD NVLSKLSNMVVEFAMSTKTSDYSVKSILPADVMDNFCKLVNFWLNYYRYQ AADVSSLEVNTNISFDLFVETATRLRDRLPVYDKHVRRKIRAEGKGAKDF MACIE* back to topmRNA from alignment at tig00000196_pilon:72352..74769- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil6309.t1 ID=Gchil6309.t1|Name=Gchil6309.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2418bp|location=Sequence derived from alignment at tig00000196_pilon:72352..74769- (Gracilaria chilensis NLEC103_M9 male) ATGTTCGACAAGGCCAGCACCGAGCTATCCCTCACTATCATCGAAGAACT
TTTGCACGTGAACAATATCGTAGATCTTTCCACCATTCCAAACTTGCACC
ACACCCTTCTAGACTTGTCTCCCATCCAACTCGGCCACGCCTGTAGAGTG
CTTGCCACCCTCGTCGACGACCGCACCGAGCCCTCTCTTTGCGGTGGCGA
CTACTGCGTCGGCAACTGCCTCGCGTACTACGGTTGGCGACCAGTTGAGG
ATTCCGCTGTCCACCTCCGTCTGCGCCGCTCATACGTGCGCGCCAACCGA
GTAGTGCGTGATCGCAATCACGCCGCACTACTCTTCGTACCCGGCCTGCT
CAAGCGTCTGGTCAAGCTTATTTTTGTACCACCTGCCACGAGAAGCGATC
TACTTGCAGTCGACTACGCCGTCAAAGCCGGCATGTTCCAAAGCTCCATA
GATCCGGTTGAGTTTGCAAATGACGGTCAGGAGCTTCTCAACATACCGCC
GGACGTAAGACACCAACTTGAACTCGCCATCCGACCCGGTTTGGATTCGC
AGGATGCACACTTCACCGGTGCCGATTGTTGGCAAACGCTCAATAGAAGA
ATTGCCTTGTCCAATCCGTCCACCAATCACCACGTTGTTCCTTTTTCTGA
TGCCAATAACCTTCTTGTAGTCTCTCCACACACCTCCGCTGCCGAGCAGT
CGCTATCTCCCGCGTACTCTCACCCCACACAAATCGCAATGTACAGTGAA
AATCCCGCACACGCCAATATTTTTTACTCGCACATTCCTTCACTTTCCGG
CGCACCGGACGATCTGTACCCCACAGGACGCGTCGTGTCCATCAGCACCA
TGATCATGTCATCGCATCAGATTGACGTTCTGTTCGTTCTCTATTCTATG
TTGATGTGCAAGCGCAAGGCTGACGTCCGAAGGCAGCTAATTGACGCGGG
CATTTTCGATGCTCTCAATCGCTTTTGCGACGCGCTAGACTGGTCTGACT
GCCCCCAAGAAACCCAAACTGAGGACTCATTGAAGATGCATTTTATCAAG
CTTGTCCACTCTATTTGTGAGTCCTCCGATGACAACGTTATGGTAGTGCG
TAACAGGCTCATGTTCAGCGAACATGAGCGCCAAATCCTGGCGGCTATGG
AGCAAGGTTGTGAATTTCATTCACTTCCTTGTGCTTCCCCCGCTTCGGTC
ACAAGCTCCGAACTACCGCCTATAGAGAGACTTTCTCTATCGTCACCTGC
ACCACCCTTGTCCTCTCCGACGGATTCCACCGGAGAAGGCCCAGCTTCCA
AGGTCTCATACGTGTTCCCGCACAGGGCGCGTTCTGCGAATGACATGCCC
TTCATGGATAGAGGTTCTCTTGCGGATGAGCCGTTCAGTTTGTCGGGCAG
CCCTAGGGTCAATAGTGCTTATAGTGCTCCAACTACCCCGCTGTCGAAAG
CGCGCAGCCGCGTGGTGCGGGACGCTCCTGAAAAGAAGGGTTTGCTAACT
AAACTTATCGGAATTTACATGCTGACAAAACGTGACGATGAAGTTTCTAG
GACGCGACGGTACCTCTTGTCTGCGTGCATCGAAACTTTCCAACGAAGTG
CTACATTGTGTGAAAAGACTTTTGTGGCACGTCAGGGTCTGCTTAGGCAT
TTGGTTGAACAGCTTGCCATGTTCACTGCTCCCAAGTCGCAAATCGTCGT
GTTCCGGCAGACAAGCTTTGATCTGCTGAGTCAGCTGATCAAATGGAATC
GAACGTTATTTCGGGAGCTTAATGAAATACTGCGGGCCGACCGTGTAGTA
CTGGAGCGGTTGCTGACAGCTGTTTCTGATCGTCTAGTGGATTCGAACGT
GTTTGTACGCTCGATTGCCTTGTCCCTCGAACGATTTCGGGCAGAAGATG
AGCTGGTTCCAGATAATGGTCAGGCGTATGAGTTTGATATTTGCGTGCTT
TGGGAGTTCATCGAGACCTATAGGGTACGTCTGATGTATGATATGATATC
AAGTGTGCGGGTAGAGGACATAACGTTTGAGAACGTTTGTTGTGTGAATA
CGGCGCTGATCTTGTTTGTGATCTCATGCCGCGATGAAGAGACGTTGGAT
AATGTGTTATCAAAGCTTTCGAACATGGTCGTCGAGTTTGCAATGTCGAC
AAAGACGTCGGATTACTCTGTGAAGTCTATATTGCCTGCCGACGTGATGG
ATAACTTTTGCAAGCTCGTAAACTTCTGGCTGAACTACTACCGATACCAA
GCGGCAGATGTCTCGTCGTTGGAGGTGAATACGAATATCTCATTTGATCT
TTTCGTTGAGACGGCAACTCGGTTGAGAGATCGGTTGCCCGTGTATGACA
AACACGTGAGAAGGAAGATAAGGGCAGAAGGGAAGGGGGCCAAGGATTTC
ATGGCATGTATAGAATGA back to topCoding sequence (CDS) from alignment at tig00000196_pilon:72352..74769- >Gchil6309.t1 ID=Gchil6309.t1|Name=Gchil6309.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2418bp|location=Sequence derived from alignment at tig00000196_pilon:72352..74769- (Gracilaria chilensis NLEC103_M9 male) ATGTTCGACAAGGCCAGCACCGAGCTATCCCTCACTATCATCGAAGAACT TTTGCACGTGAACAATATCGTAGATCTTTCCACCATTCCAAACTTGCACC ACACCCTTCTAGACTTGTCTCCCATCCAACTCGGCCACGCCTGTAGAGTG CTTGCCACCCTCGTCGACGACCGCACCGAGCCCTCTCTTTGCGGTGGCGA CTACTGCGTCGGCAACTGCCTCGCGTACTACGGTTGGCGACCAGTTGAGG ATTCCGCTGTCCACCTCCGTCTGCGCCGCTCATACGTGCGCGCCAACCGA GTAGTGCGTGATCGCAATCACGCCGCACTACTCTTCGTACCCGGCCTGCT CAAGCGTCTGGTCAAGCTTATTTTTGTACCACCTGCCACGAGAAGCGATC TACTTGCAGTCGACTACGCCGTCAAAGCCGGCATGTTCCAAAGCTCCATA GATCCGGTTGAGTTTGCAAATGACGGTCAGGAGCTTCTCAACATACCGCC GGACGTAAGACACCAACTTGAACTCGCCATCCGACCCGGTTTGGATTCGC AGGATGCACACTTCACCGGTGCCGATTGTTGGCAAACGCTCAATAGAAGA ATTGCCTTGTCCAATCCGTCCACCAATCACCACGTTGTTCCTTTTTCTGA TGCCAATAACCTTCTTGTAGTCTCTCCACACACCTCCGCTGCCGAGCAGT CGCTATCTCCCGCGTACTCTCACCCCACACAAATCGCAATGTACAGTGAA AATCCCGCACACGCCAATATTTTTTACTCGCACATTCCTTCACTTTCCGG CGCACCGGACGATCTGTACCCCACAGGACGCGTCGTGTCCATCAGCACCA TGATCATGTCATCGCATCAGATTGACGTTCTGTTCGTTCTCTATTCTATG TTGATGTGCAAGCGCAAGGCTGACGTCCGAAGGCAGCTAATTGACGCGGG CATTTTCGATGCTCTCAATCGCTTTTGCGACGCGCTAGACTGGTCTGACT GCCCCCAAGAAACCCAAACTGAGGACTCATTGAAGATGCATTTTATCAAG CTTGTCCACTCTATTTGTGAGTCCTCCGATGACAACGTTATGGTAGTGCG TAACAGGCTCATGTTCAGCGAACATGAGCGCCAAATCCTGGCGGCTATGG AGCAAGGTTGTGAATTTCATTCACTTCCTTGTGCTTCCCCCGCTTCGGTC ACAAGCTCCGAACTACCGCCTATAGAGAGACTTTCTCTATCGTCACCTGC ACCACCCTTGTCCTCTCCGACGGATTCCACCGGAGAAGGCCCAGCTTCCA AGGTCTCATACGTGTTCCCGCACAGGGCGCGTTCTGCGAATGACATGCCC TTCATGGATAGAGGTTCTCTTGCGGATGAGCCGTTCAGTTTGTCGGGCAG CCCTAGGGTCAATAGTGCTTATAGTGCTCCAACTACCCCGCTGTCGAAAG CGCGCAGCCGCGTGGTGCGGGACGCTCCTGAAAAGAAGGGTTTGCTAACT AAACTTATCGGAATTTACATGCTGACAAAACGTGACGATGAAGTTTCTAG GACGCGACGGTACCTCTTGTCTGCGTGCATCGAAACTTTCCAACGAAGTG CTACATTGTGTGAAAAGACTTTTGTGGCACGTCAGGGTCTGCTTAGGCAT TTGGTTGAACAGCTTGCCATGTTCACTGCTCCCAAGTCGCAAATCGTCGT GTTCCGGCAGACAAGCTTTGATCTGCTGAGTCAGCTGATCAAATGGAATC GAACGTTATTTCGGGAGCTTAATGAAATACTGCGGGCCGACCGTGTAGTA CTGGAGCGGTTGCTGACAGCTGTTTCTGATCGTCTAGTGGATTCGAACGT GTTTGTACGCTCGATTGCCTTGTCCCTCGAACGATTTCGGGCAGAAGATG AGCTGGTTCCAGATAATGGTCAGGCGTATGAGTTTGATATTTGCGTGCTT TGGGAGTTCATCGAGACCTATAGGGTACGTCTGATGTATGATATGATATC AAGTGTGCGGGTAGAGGACATAACGTTTGAGAACGTTTGTTGTGTGAATA CGGCGCTGATCTTGTTTGTGATCTCATGCCGCGATGAAGAGACGTTGGAT AATGTGTTATCAAAGCTTTCGAACATGGTCGTCGAGTTTGCAATGTCGAC AAAGACGTCGGATTACTCTGTGAAGTCTATATTGCCTGCCGACGTGATGG ATAACTTTTGCAAGCTCGTAAACTTCTGGCTGAACTACTACCGATACCAA GCGGCAGATGTCTCGTCGTTGGAGGTGAATACGAATATCTCATTTGATCT TTTCGTTGAGACGGCAACTCGGTTGAGAGATCGGTTGCCCGTGTATGACA AACACGTGAGAAGGAAGATAAGGGCAGAAGGGAAGGGGGCCAAGGATTTC ATGGCATGTATAGAATGA back to top
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