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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005709346.1 |
| PFAMs | PBD,PH,Pkinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K04409,ko:K08286 |
| KEGG Pathway | ko04010,ko04011,ko04012,ko04014,ko04024,ko04062,ko04360,ko04392,ko04510,ko04650,ko04660,ko04666,ko04810,ko05120,ko05205,ko05211,map04010,map04011,map04012,map04014,map04024,map04062,map04360,map04392,map04510,map04650,map04660,map04666,map04810,map05120,map05205,map05211 |
| GOs | GO:0000278,GO:0000281,GO:0000910,GO:0001891,GO:0001932,GO:0001934,GO:0003674,GO:0003779,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007049,GO:0007154,GO:0007163,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007346,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009267,GO:0009605,GO:0009893,GO:0009966,GO:0009987,GO:0009991,GO:0010562,GO:0010564,GO:0010604,GO:0010646,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016905,GO:0017016,GO:0017022,GO:0017048,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0022402,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0030010,GO:0030029,GO:0030036,GO:0030100,GO:0030587,GO:0031033,GO:0031034,GO:0031036,GO:0031038,GO:0031098,GO:0031152,GO:0031156,GO:0031252,GO:0031254,GO:0031267,GO:0031272,GO:0031273,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0032147,GO:0032153,GO:0032154,GO:0032155,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032502,GO:0032781,GO:0032879,GO:0033036,GO:0033554,GO:0033674,GO:0034613,GO:0034622,GO:0035556,GO:0036211,GO:0040011,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042594,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043327,GO:0043408,GO:0043412,GO:0043462,GO:0043549,GO:0043900,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044764,GO:0044877,GO:0045159,GO:0045787,GO:0045807,GO:0045859,GO:0045860,GO:0045937,GO:0046777,GO:0048365,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048856,GO:0048870,GO:0050764,GO:0050766,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051015,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051302,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051641,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060491,GO:0060627,GO:0061640,GO:0065003,GO:0065007,GO:0065009,GO:0070727,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090068,GO:0090702,GO:0097204,GO:0098590,GO:0098630,GO:0098657,GO:0098743,GO:0099120,GO:0099568,GO:0120032,GO:0120033,GO:0120035,GO:0140096,GO:1901564,GO:1902463,GO:1902531,GO:1903047 |
| Evalue | 1.06e-107 |
| EggNOG OGs | KOG0578@1|root,KOG0578@2759|Eukaryota |
| EC | 2.7.11.1 |
| Description | Rac GTPase binding |
| COG category | F |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03036,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil7489.t1 ID=Gchil7489.t1|Name=Gchil7489.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=670bp MGNTPSFPASAHSRTNSDFPLSTLSTDDNDATSALSEKLSPKRSRQPLSP IPPNAIDSKLNSARNNLAKLVTPARRLTEGKENAMPTDCRRHLHLLLLNK SHDPPVVSNPTKVKRKVHVEFDPTTGTYKGLEEAIRDVYDAAAPDEVEEL SQTFSDSAISFQRTTSAALKSKSGHVPDRPRKTRLIGTDNEHTDRALAPD REELSRSALIRMKRGKFHFPVASHLRHGVSNAPAVVVGKPRHFQHKTHVK VDPTHPTGFVGLPREWEILLKHSGINREMALENPQELLDVLQVNYEKQTN PNKSGQYHFDRVKMSDTTHIDNNLLKNWEPNFISANPLKIFKDVIKIGEG SCGSVYRAFDPKRKVPVAIKRVMPKSEEDLTLFKFEVAIMSSAFHHNLIK CYDSYKFDENMFIVMELADAGSLTDVLYFLNDRQMHLNEPEIAFICREAL QGLASLHGIKRIHRDIKSDNTLVTRDGQVKIADFGFAAQLTAKENKRNTV IGTPFWMAPEVCRGLEYDSKVDVWSTGVLAIECAEGAPPLLHETQMKAMF LIATKGPPRLKRPEEWTSDFHDFIARCTAINPEQRATASEMLRHPFLKRA ANAEHMGRIFSVVADFKEKESPKYQNCENVDPNDPRPESPQLSLDINDVE YVSAADTLSEINVPPEKNR* back to topspliced messenger RNA >Gchil7489.t1 ID=Gchil7489.t1|Name=Gchil7489.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2010bp|location=Sequence derived from alignment at tig00000007_pilon:1492491..1494500- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGCAACACCCCCTCTTTCCCTGCGTCTGCCCATTCGCGCACAAACTC AGACTTTCCCCTTTCCACGCTCTCCACCGACGACAACGACGCCACCAGCG CCCTCTCCGAAAAACTTTCGCCAAAGCGCTCGCGCCAACCACTCTCTCCC ATCCCCCCCAACGCAATCGACTCCAAGCTCAATTCGGCGCGAAACAATCT TGCAAAGCTTGTGACGCCAGCGCGTCGCCTCACAGAAGGAAAGGAGAATG CAATGCCCACCGATTGCAGAAGGCATCTGCACCTTCTTCTGTTAAACAAG TCCCATGATCCCCCCGTCGTTTCCAACCCAACAAAGGTGAAGCGAAAGGT TCACGTGGAGTTCGATCCCACCACCGGCACCTACAAGGGCTTGGAAGAGG CCATTCGCGACGTGTACGACGCCGCCGCGCCTGACGAGGTCGAAGAACTC TCGCAAACTTTTTCTGACTCCGCAATCTCCTTTCAGAGGACTACATCTGC CGCTCTCAAGTCCAAATCAGGCCATGTTCCTGACCGCCCGCGTAAGACCA GGCTGATTGGCACCGATAACGAGCACACCGACCGCGCATTAGCACCCGAT CGAGAAGAACTCAGCCGTTCTGCTCTCATTCGCATGAAGCGAGGCAAGTT TCACTTCCCCGTCGCTTCCCATCTGCGTCACGGTGTATCCAATGCTCCAG CTGTTGTTGTCGGAAAGCCCCGTCATTTCCAACACAAAACCCATGTCAAG GTTGACCCAACACATCCTACAGGCTTTGTTGGCCTGCCGCGCGAATGGGA GATCTTGCTCAAACATTCCGGCATCAATCGCGAGATGGCATTGGAGAATC CCCAGGAATTGCTCGACGTTCTCCAAGTCAATTACGAGAAGCAGACCAAT CCCAACAAGTCAGGGCAGTATCACTTCGATCGAGTCAAGATGAGCGATAC CACTCATATTGACAACAACCTTCTGAAGAATTGGGAGCCTAACTTCATTT CGGCAAATCCTCTCAAGATCTTCAAGGATGTCATCAAGATTGGTGAAGGC TCTTGTGGTTCCGTCTACAGAGCGTTTGATCCGAAGCGAAAAGTTCCAGT GGCAATTAAGAGAGTAATGCCCAAGTCCGAAGAAGACCTCACTCTCTTCA AGTTCGAGGTCGCCATCATGAGCTCGGCGTTTCACCATAACCTTATCAAG TGTTATGATTCCTACAAATTTGACGAAAATATGTTCATTGTCATGGAGCT TGCGGATGCTGGTTCACTGACCGATGTTCTGTATTTCCTAAACGACAGGC AAATGCATCTAAACGAACCCGAAATCGCGTTCATCTGCCGAGAAGCCCTT CAAGGGCTTGCCTCATTGCATGGCATAAAACGTATCCATCGTGACATCAA GTCCGACAATACACTGGTAACAAGAGATGGCCAAGTGAAGATTGCTGACT TTGGATTCGCAGCTCAGCTGACAGCCAAGGAGAACAAGCGAAACACAGTC ATTGGAACTCCGTTTTGGATGGCGCCAGAGGTTTGCCGGGGCCTGGAATA CGATTCGAAGGTGGATGTGTGGTCAACAGGGGTGTTGGCCATCGAATGTG CGGAAGGGGCGCCTCCCCTCTTGCACGAGACGCAAATGAAAGCCATGTTT TTGATTGCAACAAAGGGACCCCCACGGCTGAAAAGGCCAGAAGAGTGGAC ATCGGATTTCCACGACTTTATTGCAAGATGTACCGCAATCAATCCTGAAC AGCGGGCAACCGCTTCCGAAATGCTACGGCATCCTTTCCTTAAACGCGCC GCAAATGCAGAGCACATGGGCAGAATCTTCAGTGTCGTCGCTGACTTTAA GGAGAAAGAGAGCCCAAAATACCAAAACTGTGAAAATGTGGACCCCAACG ATCCAAGACCGGAGTCCCCACAGCTTAGCCTTGATATCAATGACGTGGAG TACGTAAGTGCCGCAGATACTCTATCGGAAATTAACGTGCCTCCAGAGAA GAACCGGTAA back to topprotein sequence of Gchil7489.t1 >Gchil7489.t1 ID=Gchil7489.t1|Name=Gchil7489.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=670bp
MGNTPSFPASAHSRTNSDFPLSTLSTDDNDATSALSEKLSPKRSRQPLSP IPPNAIDSKLNSARNNLAKLVTPARRLTEGKENAMPTDCRRHLHLLLLNK SHDPPVVSNPTKVKRKVHVEFDPTTGTYKGLEEAIRDVYDAAAPDEVEEL SQTFSDSAISFQRTTSAALKSKSGHVPDRPRKTRLIGTDNEHTDRALAPD REELSRSALIRMKRGKFHFPVASHLRHGVSNAPAVVVGKPRHFQHKTHVK VDPTHPTGFVGLPREWEILLKHSGINREMALENPQELLDVLQVNYEKQTN PNKSGQYHFDRVKMSDTTHIDNNLLKNWEPNFISANPLKIFKDVIKIGEG SCGSVYRAFDPKRKVPVAIKRVMPKSEEDLTLFKFEVAIMSSAFHHNLIK CYDSYKFDENMFIVMELADAGSLTDVLYFLNDRQMHLNEPEIAFICREAL QGLASLHGIKRIHRDIKSDNTLVTRDGQVKIADFGFAAQLTAKENKRNTV IGTPFWMAPEVCRGLEYDSKVDVWSTGVLAIECAEGAPPLLHETQMKAMF LIATKGPPRLKRPEEWTSDFHDFIARCTAINPEQRATASEMLRHPFLKRA ANAEHMGRIFSVVADFKEKESPKYQNCENVDPNDPRPESPQLSLDINDVE YVSAADTLSEINVPPEKNR* back to topmRNA from alignment at tig00000007_pilon:1492491..1494500- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil7489.t1 ID=Gchil7489.t1|Name=Gchil7489.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2010bp|location=Sequence derived from alignment at tig00000007_pilon:1492491..1494500- (Gracilaria chilensis NLEC103_M9 male) ATGGGCAACACCCCCTCTTTCCCTGCGTCTGCCCATTCGCGCACAAACTC
AGACTTTCCCCTTTCCACGCTCTCCACCGACGACAACGACGCCACCAGCG
CCCTCTCCGAAAAACTTTCGCCAAAGCGCTCGCGCCAACCACTCTCTCCC
ATCCCCCCCAACGCAATCGACTCCAAGCTCAATTCGGCGCGAAACAATCT
TGCAAAGCTTGTGACGCCAGCGCGTCGCCTCACAGAAGGAAAGGAGAATG
CAATGCCCACCGATTGCAGAAGGCATCTGCACCTTCTTCTGTTAAACAAG
TCCCATGATCCCCCCGTCGTTTCCAACCCAACAAAGGTGAAGCGAAAGGT
TCACGTGGAGTTCGATCCCACCACCGGCACCTACAAGGGCTTGGAAGAGG
CCATTCGCGACGTGTACGACGCCGCCGCGCCTGACGAGGTCGAAGAACTC
TCGCAAACTTTTTCTGACTCCGCAATCTCCTTTCAGAGGACTACATCTGC
CGCTCTCAAGTCCAAATCAGGCCATGTTCCTGACCGCCCGCGTAAGACCA
GGCTGATTGGCACCGATAACGAGCACACCGACCGCGCATTAGCACCCGAT
CGAGAAGAACTCAGCCGTTCTGCTCTCATTCGCATGAAGCGAGGCAAGTT
TCACTTCCCCGTCGCTTCCCATCTGCGTCACGGTGTATCCAATGCTCCAG
CTGTTGTTGTCGGAAAGCCCCGTCATTTCCAACACAAAACCCATGTCAAG
GTTGACCCAACACATCCTACAGGCTTTGTTGGCCTGCCGCGCGAATGGGA
GATCTTGCTCAAACATTCCGGCATCAATCGCGAGATGGCATTGGAGAATC
CCCAGGAATTGCTCGACGTTCTCCAAGTCAATTACGAGAAGCAGACCAAT
CCCAACAAGTCAGGGCAGTATCACTTCGATCGAGTCAAGATGAGCGATAC
CACTCATATTGACAACAACCTTCTGAAGAATTGGGAGCCTAACTTCATTT
CGGCAAATCCTCTCAAGATCTTCAAGGATGTCATCAAGATTGGTGAAGGC
TCTTGTGGTTCCGTCTACAGAGCGTTTGATCCGAAGCGAAAAGTTCCAGT
GGCAATTAAGAGAGTAATGCCCAAGTCCGAAGAAGACCTCACTCTCTTCA
AGTTCGAGGTCGCCATCATGAGCTCGGCGTTTCACCATAACCTTATCAAG
TGTTATGATTCCTACAAATTTGACGAAAATATGTTCATTGTCATGGAGCT
TGCGGATGCTGGTTCACTGACCGATGTTCTGTATTTCCTAAACGACAGGC
AAATGCATCTAAACGAACCCGAAATCGCGTTCATCTGCCGAGAAGCCCTT
CAAGGGCTTGCCTCATTGCATGGCATAAAACGTATCCATCGTGACATCAA
GTCCGACAATACACTGGTAACAAGAGATGGCCAAGTGAAGATTGCTGACT
TTGGATTCGCAGCTCAGCTGACAGCCAAGGAGAACAAGCGAAACACAGTC
ATTGGAACTCCGTTTTGGATGGCGCCAGAGGTTTGCCGGGGCCTGGAATA
CGATTCGAAGGTGGATGTGTGGTCAACAGGGGTGTTGGCCATCGAATGTG
CGGAAGGGGCGCCTCCCCTCTTGCACGAGACGCAAATGAAAGCCATGTTT
TTGATTGCAACAAAGGGACCCCCACGGCTGAAAAGGCCAGAAGAGTGGAC
ATCGGATTTCCACGACTTTATTGCAAGATGTACCGCAATCAATCCTGAAC
AGCGGGCAACCGCTTCCGAAATGCTACGGCATCCTTTCCTTAAACGCGCC
GCAAATGCAGAGCACATGGGCAGAATCTTCAGTGTCGTCGCTGACTTTAA
GGAGAAAGAGAGCCCAAAATACCAAAACTGTGAAAATGTGGACCCCAACG
ATCCAAGACCGGAGTCCCCACAGCTTAGCCTTGATATCAATGACGTGGAG
TACGTAAGTGCCGCAGATACTCTATCGGAAATTAACGTGCCTCCAGAGAA
GAACCGGTAA back to topCoding sequence (CDS) from alignment at tig00000007_pilon:1492491..1494500- >Gchil7489.t1 ID=Gchil7489.t1|Name=Gchil7489.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2010bp|location=Sequence derived from alignment at tig00000007_pilon:1492491..1494500- (Gracilaria chilensis NLEC103_M9 male) ATGGGCAACACCCCCTCTTTCCCTGCGTCTGCCCATTCGCGCACAAACTC AGACTTTCCCCTTTCCACGCTCTCCACCGACGACAACGACGCCACCAGCG CCCTCTCCGAAAAACTTTCGCCAAAGCGCTCGCGCCAACCACTCTCTCCC ATCCCCCCCAACGCAATCGACTCCAAGCTCAATTCGGCGCGAAACAATCT TGCAAAGCTTGTGACGCCAGCGCGTCGCCTCACAGAAGGAAAGGAGAATG CAATGCCCACCGATTGCAGAAGGCATCTGCACCTTCTTCTGTTAAACAAG TCCCATGATCCCCCCGTCGTTTCCAACCCAACAAAGGTGAAGCGAAAGGT TCACGTGGAGTTCGATCCCACCACCGGCACCTACAAGGGCTTGGAAGAGG CCATTCGCGACGTGTACGACGCCGCCGCGCCTGACGAGGTCGAAGAACTC TCGCAAACTTTTTCTGACTCCGCAATCTCCTTTCAGAGGACTACATCTGC CGCTCTCAAGTCCAAATCAGGCCATGTTCCTGACCGCCCGCGTAAGACCA GGCTGATTGGCACCGATAACGAGCACACCGACCGCGCATTAGCACCCGAT CGAGAAGAACTCAGCCGTTCTGCTCTCATTCGCATGAAGCGAGGCAAGTT TCACTTCCCCGTCGCTTCCCATCTGCGTCACGGTGTATCCAATGCTCCAG CTGTTGTTGTCGGAAAGCCCCGTCATTTCCAACACAAAACCCATGTCAAG GTTGACCCAACACATCCTACAGGCTTTGTTGGCCTGCCGCGCGAATGGGA GATCTTGCTCAAACATTCCGGCATCAATCGCGAGATGGCATTGGAGAATC CCCAGGAATTGCTCGACGTTCTCCAAGTCAATTACGAGAAGCAGACCAAT CCCAACAAGTCAGGGCAGTATCACTTCGATCGAGTCAAGATGAGCGATAC CACTCATATTGACAACAACCTTCTGAAGAATTGGGAGCCTAACTTCATTT CGGCAAATCCTCTCAAGATCTTCAAGGATGTCATCAAGATTGGTGAAGGC TCTTGTGGTTCCGTCTACAGAGCGTTTGATCCGAAGCGAAAAGTTCCAGT GGCAATTAAGAGAGTAATGCCCAAGTCCGAAGAAGACCTCACTCTCTTCA AGTTCGAGGTCGCCATCATGAGCTCGGCGTTTCACCATAACCTTATCAAG TGTTATGATTCCTACAAATTTGACGAAAATATGTTCATTGTCATGGAGCT TGCGGATGCTGGTTCACTGACCGATGTTCTGTATTTCCTAAACGACAGGC AAATGCATCTAAACGAACCCGAAATCGCGTTCATCTGCCGAGAAGCCCTT CAAGGGCTTGCCTCATTGCATGGCATAAAACGTATCCATCGTGACATCAA GTCCGACAATACACTGGTAACAAGAGATGGCCAAGTGAAGATTGCTGACT TTGGATTCGCAGCTCAGCTGACAGCCAAGGAGAACAAGCGAAACACAGTC ATTGGAACTCCGTTTTGGATGGCGCCAGAGGTTTGCCGGGGCCTGGAATA CGATTCGAAGGTGGATGTGTGGTCAACAGGGGTGTTGGCCATCGAATGTG CGGAAGGGGCGCCTCCCCTCTTGCACGAGACGCAAATGAAAGCCATGTTT TTGATTGCAACAAAGGGACCCCCACGGCTGAAAAGGCCAGAAGAGTGGAC ATCGGATTTCCACGACTTTATTGCAAGATGTACCGCAATCAATCCTGAAC AGCGGGCAACCGCTTCCGAAATGCTACGGCATCCTTTCCTTAAACGCGCC GCAAATGCAGAGCACATGGGCAGAATCTTCAGTGTCGTCGCTGACTTTAA GGAGAAAGAGAGCCCAAAATACCAAAACTGTGAAAATGTGGACCCCAACG ATCCAAGACCGGAGTCCCCACAGCTTAGCCTTGATATCAATGACGTGGAG TACGTAAGTGCCGCAGATACTCTATCGGAAATTAACGTGCCTCCAGAGAA GAACCGGTAA back to top
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