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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 314271.RB2654_08177 |
| PFAMs | Glyco_transf_7C |
| Max annot lvl | 28211|Alphaproteobacteria |
| Evalue | 2.08e-21 |
| EggNOG OGs | COG1216@1|root,COG1216@2|Bacteria,1MZBS@1224|Proteobacteria,2UEUD@28211|Alphaproteobacteria |
| Description | N-terminal domain of galactosyltransferase |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil3282.t1 ID=Gchil3282.t1|Name=Gchil3282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=888bp MRPSGAVPPPASLPPLPSPPPSLPPSLPRRARKAAARLARDAAVRLRAAR GARLLLPALTLTLALLLVAALLLAWGGDGDGYSDGSAQCACATRTSAAAL TRALLSRARVVALAQRVATYHFEPVALFDAPPPLLHARLAVPPARVAWCA RARAMPLALQRASALFLVVAAGVSPPPRRNACALLEPLAPDCALRRGRAL SLSPSPAVFVFPWRALSRDVVDALRADLDRDPLWWRYASARRHADDVVRA AANNSHAALYAKHRWWLAPGLSVVAACKDRSHSLLQALPTWLAAPAVHHV VLVDWSSAPSIASLLPPHLGRHPKLTLVNVLHQPHWVLSTAYNLAVRISH HADILKLDCDTVLHPTFFQAHQLQPHTFFAGDWHKLQTAASEKLHANGLL YVSRLHFLAVGGYDERITTYGWDDSDIVSRLSALATPKPILYDTIAHIPH NASLRVANSYSVLPASNPHAAAVEIQRNRLLMTHFHLPQWHATSVHTLWN LKRHVNTTAQQHIIYARAATTVTPALHLVSDADALDVSKRAIRLILKRYG VDLLPKTLSLSFYKQLIDKVAHAPLYANAVFSLRGGCISRLLAHVQVKQT TSVGTAEYAPPPKSYSGWRVQELWHFPSPECSCKFFSPFSAVDEEISSTW DDADNPLSTSTLLSQSRYANNVSFVLRLFDKFSARKNLSAQVARWIASRN DSYSQRIMFADISCHFEPSTLTPEQRESVRRQLRATTPSQTILDVMEGLQ SESRQCLLDSPLLDRAEVNKHVQSDKQLPSFAIFSNPAFLEMAHKWSPAF VPQGRPHAASRAKSLFTALYLSETRASSMAHVDASFLSVEQRQLVSKLST RVSSLFSGCISTPFRYIHAYPELTIIIASFICSGICI* back to topspliced messenger RNA >Gchil3282.t1 ID=Gchil3282.t1|Name=Gchil3282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2664bp|location=Sequence derived from alignment at tig00000168_pilon:1476..4139- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCGTCCCTCCGGCGCCGTCCCTCCTCCCGCCTCTCTGCCGCCATTGCC GTCGCCGCCGCCGTCGCTGCCGCCGTCGCTGCCGCGCCGCGCGCGCAAGG CGGCGGCGCGACTCGCGCGCGATGCCGCCGTGAGGCTGCGTGCCGCGCGC GGCGCGCGCCTTCTGCTGCCGGCGCTCACGCTCACGCTGGCGCTGTTGCT GGTCGCCGCGTTGCTACTGGCCTGGGGCGGCGACGGCGACGGCTACAGCG ACGGCTCCGCGCAGTGCGCGTGCGCGACGCGCACGTCCGCGGCGGCGCTG ACGCGCGCGCTGCTGTCGCGCGCGCGCGTAGTGGCGCTGGCGCAACGCGT GGCGACCTACCACTTCGAGCCGGTGGCGCTGTTCGACGCGCCGCCGCCGC TGCTGCATGCGCGTCTCGCCGTGCCGCCGGCGCGTGTGGCGTGGTGCGCG CGCGCGCGCGCAATGCCGCTGGCGTTGCAACGCGCCTCTGCTCTGTTCCT TGTCGTGGCGGCCGGCGTCTCGCCGCCGCCCCGCCGCAACGCCTGTGCGC TGCTCGAGCCGCTCGCGCCCGACTGCGCGCTTCGACGCGGCCGTGCGCTG TCGTTGTCGCCGTCGCCCGCCGTCTTCGTCTTTCCGTGGCGCGCGCTTTC GCGCGATGTTGTCGATGCGCTGCGCGCCGATCTCGACCGCGATCCGCTGT GGTGGCGCTACGCCAGCGCGCGTCGCCATGCGGATGACGTCGTGCGCGCC GCCGCCAACAACTCGCACGCCGCGCTCTACGCCAAACACCGCTGGTGGCT CGCACCTGGTCTCTCTGTCGTCGCCGCCTGCAAGGATCGTTCCCACTCGC TCTTGCAGGCGCTTCCCACCTGGCTGGCCGCCCCTGCCGTTCACCACGTC GTCTTGGTCGACTGGTCTTCTGCCCCGTCCATCGCCTCGCTGCTGCCGCC GCACCTTGGTCGTCACCCAAAACTAACGCTGGTCAACGTCTTGCACCAGC CGCACTGGGTACTCTCCACGGCCTACAATCTGGCCGTGCGCATCTCCCAC CACGCCGACATCCTCAAGTTGGATTGCGACACCGTGCTGCACCCCACCTT TTTTCAAGCCCATCAGCTCCAACCGCACACCTTCTTCGCCGGCGATTGGC ACAAGTTGCAAACCGCCGCCTCCGAAAAGCTTCACGCGAACGGACTGCTC TATGTGTCGCGACTCCACTTCCTCGCTGTCGGTGGATATGATGAGCGAAT CACAACGTACGGCTGGGATGATTCCGATATTGTATCGCGACTCTCAGCAC TGGCCACTCCGAAACCCATTCTGTACGATACCATTGCGCACATTCCACAC AATGCCTCCCTTCGTGTCGCCAACTCGTACAGCGTACTACCTGCTTCCAA CCCTCACGCTGCCGCTGTCGAGATCCAGCGTAACCGACTTTTAATGACGC ATTTCCACCTGCCCCAGTGGCACGCTACATCTGTGCACACCCTGTGGAAC TTGAAACGCCACGTCAATACCACCGCTCAACAGCATATTATATATGCCCG CGCTGCCACCACTGTTACCCCCGCCCTACATCTTGTCTCGGATGCGGACG CCCTGGATGTGTCCAAGCGAGCCATTCGGCTCATCCTCAAACGGTACGGG GTCGACCTGCTTCCAAAGACGCTGTCGCTCAGCTTTTATAAACAGCTTAT TGATAAGGTGGCCCACGCGCCGCTGTACGCCAATGCTGTTTTCTCTCTCC GCGGTGGCTGCATCTCCCGCTTACTAGCCCACGTGCAAGTCAAGCAGACC ACCTCTGTCGGAACCGCCGAATATGCGCCGCCGCCAAAGTCGTACAGTGG ATGGCGTGTGCAGGAACTGTGGCACTTTCCATCTCCCGAGTGCTCGTGCA AATTCTTCTCCCCGTTTTCGGCCGTCGATGAGGAGATCTCGTCCACCTGG GATGATGCTGACAACCCGTTGAGCACGTCCACACTTCTGTCTCAGTCTCG ATACGCCAATAATGTGTCATTTGTTCTGCGTTTGTTTGACAAATTCTCTG CCAGAAAGAACCTGTCTGCGCAGGTTGCACGATGGATTGCGTCCCGGAAT GACTCTTATTCACAGCGAATAATGTTCGCGGATATATCATGTCACTTCGA ACCGTCCACTCTCACGCCCGAGCAGAGGGAGTCTGTCAGGAGGCAGCTTC GAGCCACCACCCCCAGCCAAACCATCCTGGACGTAATGGAAGGTTTACAG TCAGAGTCAAGACAATGCTTGCTAGACTCTCCGCTCTTGGACCGCGCCGA GGTGAACAAGCATGTTCAGTCAGACAAACAATTGCCCTCTTTTGCCATTT TCTCCAACCCTGCATTCCTAGAAATGGCTCACAAATGGAGCCCTGCATTC GTTCCACAGGGCCGTCCTCACGCTGCAAGCAGAGCGAAGTCACTTTTTAC TGCCCTGTATTTAAGTGAGACACGCGCCTCTTCAATGGCTCATGTGGACG CTTCTTTTCTCTCAGTTGAACAACGACAACTTGTTTCCAAGCTATCCACT CGCGTTTCTTCCTTATTTTCAGGATGTATATCGACACCCTTCCGGTATAT TCATGCTTATCCCGAGCTGACAATTATTATTGCCAGCTTCATTTGTTCTG GGATTTGTATTTAG back to topprotein sequence of Gchil3282.t1 >Gchil3282.t1 ID=Gchil3282.t1|Name=Gchil3282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=888bp
MRPSGAVPPPASLPPLPSPPPSLPPSLPRRARKAAARLARDAAVRLRAAR GARLLLPALTLTLALLLVAALLLAWGGDGDGYSDGSAQCACATRTSAAAL TRALLSRARVVALAQRVATYHFEPVALFDAPPPLLHARLAVPPARVAWCA RARAMPLALQRASALFLVVAAGVSPPPRRNACALLEPLAPDCALRRGRAL SLSPSPAVFVFPWRALSRDVVDALRADLDRDPLWWRYASARRHADDVVRA AANNSHAALYAKHRWWLAPGLSVVAACKDRSHSLLQALPTWLAAPAVHHV VLVDWSSAPSIASLLPPHLGRHPKLTLVNVLHQPHWVLSTAYNLAVRISH HADILKLDCDTVLHPTFFQAHQLQPHTFFAGDWHKLQTAASEKLHANGLL YVSRLHFLAVGGYDERITTYGWDDSDIVSRLSALATPKPILYDTIAHIPH NASLRVANSYSVLPASNPHAAAVEIQRNRLLMTHFHLPQWHATSVHTLWN LKRHVNTTAQQHIIYARAATTVTPALHLVSDADALDVSKRAIRLILKRYG VDLLPKTLSLSFYKQLIDKVAHAPLYANAVFSLRGGCISRLLAHVQVKQT TSVGTAEYAPPPKSYSGWRVQELWHFPSPECSCKFFSPFSAVDEEISSTW DDADNPLSTSTLLSQSRYANNVSFVLRLFDKFSARKNLSAQVARWIASRN DSYSQRIMFADISCHFEPSTLTPEQRESVRRQLRATTPSQTILDVMEGLQ SESRQCLLDSPLLDRAEVNKHVQSDKQLPSFAIFSNPAFLEMAHKWSPAF VPQGRPHAASRAKSLFTALYLSETRASSMAHVDASFLSVEQRQLVSKLST RVSSLFSGCISTPFRYIHAYPELTIIIASFICSGICI* back to topmRNA from alignment at tig00000168_pilon:1476..4139- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil3282.t1 ID=Gchil3282.t1|Name=Gchil3282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2664bp|location=Sequence derived from alignment at tig00000168_pilon:1476..4139- (Gracilaria chilensis NLEC103_M9 male) ATGCGTCCCTCCGGCGCCGTCCCTCCTCCCGCCTCTCTGCCGCCATTGCC
GTCGCCGCCGCCGTCGCTGCCGCCGTCGCTGCCGCGCCGCGCGCGCAAGG
CGGCGGCGCGACTCGCGCGCGATGCCGCCGTGAGGCTGCGTGCCGCGCGC
GGCGCGCGCCTTCTGCTGCCGGCGCTCACGCTCACGCTGGCGCTGTTGCT
GGTCGCCGCGTTGCTACTGGCCTGGGGCGGCGACGGCGACGGCTACAGCG
ACGGCTCCGCGCAGTGCGCGTGCGCGACGCGCACGTCCGCGGCGGCGCTG
ACGCGCGCGCTGCTGTCGCGCGCGCGCGTAGTGGCGCTGGCGCAACGCGT
GGCGACCTACCACTTCGAGCCGGTGGCGCTGTTCGACGCGCCGCCGCCGC
TGCTGCATGCGCGTCTCGCCGTGCCGCCGGCGCGTGTGGCGTGGTGCGCG
CGCGCGCGCGCAATGCCGCTGGCGTTGCAACGCGCCTCTGCTCTGTTCCT
TGTCGTGGCGGCCGGCGTCTCGCCGCCGCCCCGCCGCAACGCCTGTGCGC
TGCTCGAGCCGCTCGCGCCCGACTGCGCGCTTCGACGCGGCCGTGCGCTG
TCGTTGTCGCCGTCGCCCGCCGTCTTCGTCTTTCCGTGGCGCGCGCTTTC
GCGCGATGTTGTCGATGCGCTGCGCGCCGATCTCGACCGCGATCCGCTGT
GGTGGCGCTACGCCAGCGCGCGTCGCCATGCGGATGACGTCGTGCGCGCC
GCCGCCAACAACTCGCACGCCGCGCTCTACGCCAAACACCGCTGGTGGCT
CGCACCTGGTCTCTCTGTCGTCGCCGCCTGCAAGGATCGTTCCCACTCGC
TCTTGCAGGCGCTTCCCACCTGGCTGGCCGCCCCTGCCGTTCACCACGTC
GTCTTGGTCGACTGGTCTTCTGCCCCGTCCATCGCCTCGCTGCTGCCGCC
GCACCTTGGTCGTCACCCAAAACTAACGCTGGTCAACGTCTTGCACCAGC
CGCACTGGGTACTCTCCACGGCCTACAATCTGGCCGTGCGCATCTCCCAC
CACGCCGACATCCTCAAGTTGGATTGCGACACCGTGCTGCACCCCACCTT
TTTTCAAGCCCATCAGCTCCAACCGCACACCTTCTTCGCCGGCGATTGGC
ACAAGTTGCAAACCGCCGCCTCCGAAAAGCTTCACGCGAACGGACTGCTC
TATGTGTCGCGACTCCACTTCCTCGCTGTCGGTGGATATGATGAGCGAAT
CACAACGTACGGCTGGGATGATTCCGATATTGTATCGCGACTCTCAGCAC
TGGCCACTCCGAAACCCATTCTGTACGATACCATTGCGCACATTCCACAC
AATGCCTCCCTTCGTGTCGCCAACTCGTACAGCGTACTACCTGCTTCCAA
CCCTCACGCTGCCGCTGTCGAGATCCAGCGTAACCGACTTTTAATGACGC
ATTTCCACCTGCCCCAGTGGCACGCTACATCTGTGCACACCCTGTGGAAC
TTGAAACGCCACGTCAATACCACCGCTCAACAGCATATTATATATGCCCG
CGCTGCCACCACTGTTACCCCCGCCCTACATCTTGTCTCGGATGCGGACG
CCCTGGATGTGTCCAAGCGAGCCATTCGGCTCATCCTCAAACGGTACGGG
GTCGACCTGCTTCCAAAGACGCTGTCGCTCAGCTTTTATAAACAGCTTAT
TGATAAGGTGGCCCACGCGCCGCTGTACGCCAATGCTGTTTTCTCTCTCC
GCGGTGGCTGCATCTCCCGCTTACTAGCCCACGTGCAAGTCAAGCAGACC
ACCTCTGTCGGAACCGCCGAATATGCGCCGCCGCCAAAGTCGTACAGTGG
ATGGCGTGTGCAGGAACTGTGGCACTTTCCATCTCCCGAGTGCTCGTGCA
AATTCTTCTCCCCGTTTTCGGCCGTCGATGAGGAGATCTCGTCCACCTGG
GATGATGCTGACAACCCGTTGAGCACGTCCACACTTCTGTCTCAGTCTCG
ATACGCCAATAATGTGTCATTTGTTCTGCGTTTGTTTGACAAATTCTCTG
CCAGAAAGAACCTGTCTGCGCAGGTTGCACGATGGATTGCGTCCCGGAAT
GACTCTTATTCACAGCGAATAATGTTCGCGGATATATCATGTCACTTCGA
ACCGTCCACTCTCACGCCCGAGCAGAGGGAGTCTGTCAGGAGGCAGCTTC
GAGCCACCACCCCCAGCCAAACCATCCTGGACGTAATGGAAGGTTTACAG
TCAGAGTCAAGACAATGCTTGCTAGACTCTCCGCTCTTGGACCGCGCCGA
GGTGAACAAGCATGTTCAGTCAGACAAACAATTGCCCTCTTTTGCCATTT
TCTCCAACCCTGCATTCCTAGAAATGGCTCACAAATGGAGCCCTGCATTC
GTTCCACAGGGCCGTCCTCACGCTGCAAGCAGAGCGAAGTCACTTTTTAC
TGCCCTGTATTTAAGTGAGACACGCGCCTCTTCAATGGCTCATGTGGACG
CTTCTTTTCTCTCAGTTGAACAACGACAACTTGTTTCCAAGCTATCCACT
CGCGTTTCTTCCTTATTTTCAGGATGTATATCGACACCCTTCCGGTATAT
TCATGCTTATCCCGAGCTGACAATTATTATTGCCAGCTTCATTTGTTCTG
GGATTTGTATTTAG back to topCoding sequence (CDS) from alignment at tig00000168_pilon:1476..4139- >Gchil3282.t1 ID=Gchil3282.t1|Name=Gchil3282.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2664bp|location=Sequence derived from alignment at tig00000168_pilon:1476..4139- (Gracilaria chilensis NLEC103_M9 male) ATGCGTCCCTCCGGCGCCGTCCCTCCTCCCGCCTCTCTGCCGCCATTGCC GTCGCCGCCGCCGTCGCTGCCGCCGTCGCTGCCGCGCCGCGCGCGCAAGG CGGCGGCGCGACTCGCGCGCGATGCCGCCGTGAGGCTGCGTGCCGCGCGC GGCGCGCGCCTTCTGCTGCCGGCGCTCACGCTCACGCTGGCGCTGTTGCT GGTCGCCGCGTTGCTACTGGCCTGGGGCGGCGACGGCGACGGCTACAGCG ACGGCTCCGCGCAGTGCGCGTGCGCGACGCGCACGTCCGCGGCGGCGCTG ACGCGCGCGCTGCTGTCGCGCGCGCGCGTAGTGGCGCTGGCGCAACGCGT GGCGACCTACCACTTCGAGCCGGTGGCGCTGTTCGACGCGCCGCCGCCGC TGCTGCATGCGCGTCTCGCCGTGCCGCCGGCGCGTGTGGCGTGGTGCGCG CGCGCGCGCGCAATGCCGCTGGCGTTGCAACGCGCCTCTGCTCTGTTCCT TGTCGTGGCGGCCGGCGTCTCGCCGCCGCCCCGCCGCAACGCCTGTGCGC TGCTCGAGCCGCTCGCGCCCGACTGCGCGCTTCGACGCGGCCGTGCGCTG TCGTTGTCGCCGTCGCCCGCCGTCTTCGTCTTTCCGTGGCGCGCGCTTTC GCGCGATGTTGTCGATGCGCTGCGCGCCGATCTCGACCGCGATCCGCTGT GGTGGCGCTACGCCAGCGCGCGTCGCCATGCGGATGACGTCGTGCGCGCC GCCGCCAACAACTCGCACGCCGCGCTCTACGCCAAACACCGCTGGTGGCT CGCACCTGGTCTCTCTGTCGTCGCCGCCTGCAAGGATCGTTCCCACTCGC TCTTGCAGGCGCTTCCCACCTGGCTGGCCGCCCCTGCCGTTCACCACGTC GTCTTGGTCGACTGGTCTTCTGCCCCGTCCATCGCCTCGCTGCTGCCGCC GCACCTTGGTCGTCACCCAAAACTAACGCTGGTCAACGTCTTGCACCAGC CGCACTGGGTACTCTCCACGGCCTACAATCTGGCCGTGCGCATCTCCCAC CACGCCGACATCCTCAAGTTGGATTGCGACACCGTGCTGCACCCCACCTT TTTTCAAGCCCATCAGCTCCAACCGCACACCTTCTTCGCCGGCGATTGGC ACAAGTTGCAAACCGCCGCCTCCGAAAAGCTTCACGCGAACGGACTGCTC TATGTGTCGCGACTCCACTTCCTCGCTGTCGGTGGATATGATGAGCGAAT CACAACGTACGGCTGGGATGATTCCGATATTGTATCGCGACTCTCAGCAC TGGCCACTCCGAAACCCATTCTGTACGATACCATTGCGCACATTCCACAC AATGCCTCCCTTCGTGTCGCCAACTCGTACAGCGTACTACCTGCTTCCAA CCCTCACGCTGCCGCTGTCGAGATCCAGCGTAACCGACTTTTAATGACGC ATTTCCACCTGCCCCAGTGGCACGCTACATCTGTGCACACCCTGTGGAAC TTGAAACGCCACGTCAATACCACCGCTCAACAGCATATTATATATGCCCG CGCTGCCACCACTGTTACCCCCGCCCTACATCTTGTCTCGGATGCGGACG CCCTGGATGTGTCCAAGCGAGCCATTCGGCTCATCCTCAAACGGTACGGG GTCGACCTGCTTCCAAAGACGCTGTCGCTCAGCTTTTATAAACAGCTTAT TGATAAGGTGGCCCACGCGCCGCTGTACGCCAATGCTGTTTTCTCTCTCC GCGGTGGCTGCATCTCCCGCTTACTAGCCCACGTGCAAGTCAAGCAGACC ACCTCTGTCGGAACCGCCGAATATGCGCCGCCGCCAAAGTCGTACAGTGG ATGGCGTGTGCAGGAACTGTGGCACTTTCCATCTCCCGAGTGCTCGTGCA AATTCTTCTCCCCGTTTTCGGCCGTCGATGAGGAGATCTCGTCCACCTGG GATGATGCTGACAACCCGTTGAGCACGTCCACACTTCTGTCTCAGTCTCG ATACGCCAATAATGTGTCATTTGTTCTGCGTTTGTTTGACAAATTCTCTG CCAGAAAGAACCTGTCTGCGCAGGTTGCACGATGGATTGCGTCCCGGAAT GACTCTTATTCACAGCGAATAATGTTCGCGGATATATCATGTCACTTCGA ACCGTCCACTCTCACGCCCGAGCAGAGGGAGTCTGTCAGGAGGCAGCTTC GAGCCACCACCCCCAGCCAAACCATCCTGGACGTAATGGAAGGTTTACAG TCAGAGTCAAGACAATGCTTGCTAGACTCTCCGCTCTTGGACCGCGCCGA GGTGAACAAGCATGTTCAGTCAGACAAACAATTGCCCTCTTTTGCCATTT TCTCCAACCCTGCATTCCTAGAAATGGCTCACAAATGGAGCCCTGCATTC GTTCCACAGGGCCGTCCTCACGCTGCAAGCAGAGCGAAGTCACTTTTTAC TGCCCTGTATTTAAGTGAGACACGCGCCTCTTCAATGGCTCATGTGGACG CTTCTTTTCTCTCAGTTGAACAACGACAACTTGTTTCCAAGCTATCCACT CGCGTTTCTTCCTTATTTTCAGGATGTATATCGACACCCTTCCGGTATAT TCATGCTTATCCCGAGCTGACAATTATTATTGCCAGCTTCATTTGTTCTG GGATTTGTATTTAG back to top
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