Gchil3311.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3311.t1
Unique NameGchil3311.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length87
Homology
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A2V3J435_9FLOR (Serine palmitoyltransferase small subunit A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J435_9FLOR)

HSP 1 Score: 100 bits (248), Expect = 9.040e-26
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 0
Query:   20 PPSKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVAYIAYGLYNAALHPLFERLAISYM 86
            PP  RS  +S++L +YRYNLSTALYML+PWERALFN +VI+I+AY  YGLY +ALHPLFER+A SYM
Sbjct:   26 PPRTRSFKESVSLWVYRYNLSTALYMLEPWERALFNIVVISILAYTVYGLYYSALHPLFERIATSYM 92          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A162U900_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162U900_PHYB8)

HSP 1 Score: 53.5 bits (127), Expect = 1.100e-7
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   19 APPSKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVAYIAYGLYN 71
            A  SK  L   ++  IY+Y L TALYML+PWE+ALFNT++++IV+  A  LY 
Sbjct:    2 ATESKGGLSDYVSTKIYQYELQTALYMLEPWEKALFNTLLLSIVSLSAVTLYQ 54          
BLAST of Gchil3311.t1 vs. uniprot
Match: I1CUC0_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CUC0_RHIO9)

HSP 1 Score: 50.8 bits (120), Expect = 1.180e-6
Identity = 22/42 (52.38%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   22 SKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVA 63
            S RS+ + ++  +Y+Y L TALYML+PWE+ALFNTI+++I++
Sbjct:    3 SNRSISKFLSTKLYQYELQTALYMLEPWEKALFNTIMLSILS 44          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A1X2G6B1_9FUNG (Uncharacterized protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G6B1_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 1.270e-6
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 0
Query:   24 RSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVAYIAYGLYN 71
            +SL   I+  IY+Y L TALYML+PWE+ALFNT++++I++     LY 
Sbjct:    6 KSLSSYISTKIYQYELQTALYMLEPWEKALFNTLLLSIISLSVVTLYQ 53          
BLAST of Gchil3311.t1 vs. uniprot
Match: S2JB08_MUCC1 (Uncharacterized protein n=3 Tax=Mucor TaxID=4830 RepID=S2JB08_MUCC1)

HSP 1 Score: 50.1 bits (118), Expect = 2.210e-6
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   22 SKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVA 63
            SKRS + +    +Y+Y L TALYML+PWE+ALFNTIV++IV+
Sbjct:    3 SKRSFLSTK---LYQYELQTALYMLEPWEKALFNTIVLSIVS 41          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A8H7RYW1_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RYW1_9FUNG)

HSP 1 Score: 49.7 bits (117), Expect = 3.600e-6
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   19 APPSKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVA 63
            A  S + L  SI+  IY+Y + + LYML+PWE+ALFN I+++I+A
Sbjct:    2 ASTSNKGLSSSISTLIYKYEVQSVLYMLEPWEKALFNIILLSIIA 46          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A1X0RPV8_RHIZD (Uncharacterized protein n=2 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A1X0RPV8_RHIZD)

HSP 1 Score: 49.3 bits (116), Expect = 4.650e-6
Identity = 21/40 (52.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   24 RSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIVA 63
            +S+   ++  +Y+Y L TALYML+PWE+ALFNTIV++I++
Sbjct:    4 KSVSSFLSTKLYQYELQTALYMLEPWEKALFNTIVLSIIS 43          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A168KPJ9_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168KPJ9_ABSGL)

HSP 1 Score: 49.3 bits (116), Expect = 5.220e-6
Identity = 23/40 (57.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:   23 KRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIV 62
            ++S  + I+  IY+Y L TALYML+PWE+ALFNTI++ IV
Sbjct:    7 EKSYSKYISTKIYQYELQTALYMLEPWEKALFNTIMLCIV 46          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A8H7RMB1_9FUNG (Uncharacterized protein n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7RMB1_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 6.590e-6
Identity = 21/30 (70.00%), Postives = 28/30 (93.33%), Query Frame = 0
Query:   34 IYRYNLSTALYMLQPWERALFNTIVIAIVA 63
            +Y+Y L TALYML+PWE+ALFNTIV++IV+
Sbjct:   14 LYQYELQTALYMLEPWEKALFNTIVLSIVS 43          
BLAST of Gchil3311.t1 vs. uniprot
Match: A0A1X2IKK5_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IKK5_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 7.740e-6
Identity = 23/44 (52.27%), Postives = 33/44 (75.00%), Query Frame = 0
Query:   19 APPSKRSLVQSINLCIYRYNLSTALYMLQPWERALFNTIVIAIV 62
            A  +++     I+  IY+Y L TALYML+PWE+ALFNTI+I++V
Sbjct:    5 ATNNEKGFSNYISTKIYQYELQTALYMLEPWEKALFNTIMISLV 48          
The following BLAST results are available for this feature:
BLAST of Gchil3311.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3J435_9FLOR9.040e-2670.15Serine palmitoyltransferase small subunit A n=1 Ta... [more]
A0A162U900_PHYB81.100e-750.94Uncharacterized protein n=1 Tax=Phycomyces blakesl... [more]
I1CUC0_RHIO91.180e-652.38Uncharacterized protein n=1 Tax=Rhizopus delemar (... [more]
A0A1X2G6B1_9FUNG1.270e-650.00Uncharacterized protein n=1 Tax=Hesseltinella vesi... [more]
S2JB08_MUCC12.210e-659.52Uncharacterized protein n=3 Tax=Mucor TaxID=4830 R... [more]
A0A8H7RYW1_9FUNG3.600e-648.89Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A1X0RPV8_RHIZD4.650e-652.50Uncharacterized protein n=2 Tax=Rhizopus microspor... [more]
A0A168KPJ9_ABSGL5.220e-657.50Uncharacterized protein n=1 Tax=Absidia glauca Tax... [more]
A0A8H7RMB1_9FUNG6.590e-670.00Uncharacterized protein n=2 Tax=Mucoraceae TaxID=3... [more]
A0A1X2IKK5_9FUNG7.740e-652.27Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024512Small subunit of serine palmitoyltransferase-likePFAMPF11779SPT_ssu-likecoord: 32..70
e-value: 1.2E-12
score: 47.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..86
NoneNo IPR availableTMHMMTMhelixcoord: 52..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:102792..103162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3311.t1Gchil3311.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 102792..103162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3311.t1 ID=Gchil3311.t1|Name=Gchil3311.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=87bp
MSAPAASARQDTARTAQPAPPSKRSLVQSINLCIYRYNLSTALYMLQPWE
RALFNTIVIAIVAYIAYGLYNAALHPLFERLAISYM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024512Ser_palmitoyltrfase_ssu-like