Gchil7328.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7328.t1
Unique Name	Gchil7328.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	267

Homology

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BLAST of Gchil7328.t1 vs. uniprot
Match: A0A2V3J646_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J646_9FLOR)

HSP 1 Score: 289 bits (739), Expect = 5.040e-95
Identity = 146/228 (64.04%), Postives = 180/228 (78.95%), Query Frame = 0

Query:   39 PLLSVQSAVTGAVDTISQQIINRTDATSEGRAALEDARAQAQALQPVPSQAPPPDNQNLTGLTNRSREDIAPQPPVVDCDRECEQLADQLLEAVEGSTCRTLFTTGKCPSPCMQAISAITSNSSWPPCAAMCGGEMVTGAAQRWSALCDLHQETLVEKGKEAVKNFVTDGLRSRIHLSALMRFSLGALILFLGVAYGYRRGAISTHIAYRLQKRRLLGRKNSDSNLPV 266
            P+ SVQ AVT AV+++SQQ +N T+ATSEGRAAL+ ARA+A   QPV  Q P       T  T+ +   I   PP  +C+ ECE+LADQLL AVEG +CR+LFTTGKCP PCMQAI  IT+NSSWPPCAAMCGG+MVTGAA+RW++LC + QETLV++GKEAVK+ V +G+ S++H S LM+FS+G +IL LG+ YGYRRGAISTHIAYRL+KRRLL RKNSD NLP+
Sbjct:   41 PVRSVQEAVTEAVESLSQQFLNSTNATSEGRAALDQARAEAD--QPVIQQQPDSVQIETTNETSVNNSSIG--PPTANCEGECEELADQLLNAVEGISCRSLFTTGKCPRPCMQAIQLITANSSWPPCAAMCGGDMVTGAAERWTSLCQIRQETLVDQGKEAVKSLVAEGITSKLHASVLMQFSIGVMILALGIIYGYRRGAISTHIAYRLRKRRLLERKNSDGNLPI 264

The following BLAST results are available for this feature:

BLAST of Gchil7328.t1 vs. uniprot

BLAST of Gchil7328.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J646_9FLOR	5.040e-95	64.04	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..107
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 26..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 31..216
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..25
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 217..236
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 237..266
None	No IPR available	TMHMM	TMhelix		coord: 217..236

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000007_pilon	contig	tig00000007_pilon:331076..331876 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7328.t1	Gchil7328.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000007_pilon 331076..331876 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7328.t1 ID=Gchil7328.t1|Name=Gchil7328.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=267bp
MASRPRLPAATRAACFAIALLLAIVPPVNGEPAPAPAHPLLSVQSAVTGA
VDTISQQIINRTDATSEGRAALEDARAQAQALQPVPSQAPPPDNQNLTGL
TNRSREDIAPQPPVVDCDRECEQLADQLLEAVEGSTCRTLFTTGKCPSPC
MQAISAITSNSSWPPCAAMCGGEMVTGAAQRWSALCDLHQETLVEKGKEA
VKNFVTDGLRSRIHLSALMRFSLGALILFLGVAYGYRRGAISTHIAYRLQ
KRRLLGRKNSDSNLPV*