Gchil3360.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3360.t1
Unique NameGchil3360.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length423
Homology
BLAST of Gchil3360.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 181 bits (458), Expect = 2.030e-47
Identity = 127/388 (32.73%), Postives = 196/388 (50.52%), Query Frame = 0
Query:   41 VLVMAKRNYKVYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPLRSL-IRSETVPDVSDANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVDAIRPRLKQVELEDGSTVPIVCQPLKRASRKHVP---LPAAQEPTPANRNCTKLRVASSVTIPPESQVMVSVSSRQHGLRVVQPLPSLYEKFQLTVANGIVQVTPNSPFRVLVANLGKAPQTLAKNQVIGSVTLHPLAMLPTKVTAAEVLGITPSTEDGLP--VSGAETSGEAQQLALDKTVKTDAFTTSLVPTPDTRAQPTSYDKIDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKAREEE 422
            V V+   NY+V    GL T+ M   + VLDTGAGPN+I ESVLP       + +     + DAN   LK  GV+ L ++LG +VV+    V   L+ P ILGCD+ DR V AI P+ +++ L D   +P++        +K +P     + ++   ++   TK+R+A + T+ P ++ +VSV S   G+  + P   +    + +++NGI  +    PF V VAN G     L KN VIG    HP  ++        ++G   +    LP  V   E   EA   + +  V+ +A              P S+         +++DL  +    ++++  +L  ++ MWDGSLGEI  T+HRI L+P ++PV   PYRAGPKARE E
Sbjct:   24 VCVLKSANYRVSIAAGLTTRVMTPIVAVLDTGAGPNLIRESVLPDGWEKYRVHTSWNRRIVDANGKALKFRGVVQLALQLGELVVRTRLAVVSHLSVPCILGCDFIDRHVKAIVPKERRILLNDAKPIPLL-----PPGQKTIPPGEKDSGEKKPSSDTPSTKVRLARAATLAPGAETVVSVQSDARGICFLLPKRDIRSAPRTSMSNGIQDICSRVPFLVKVANFGGDEIFLPKNAVIGYAFPHPTCII-------SLVGEDDTNVPDLPDLVEEEEHPLEANDASEETKVQDEA--------------PKSWR--------DEVDLPTLQGEWKEKVMTLLERYSHMWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREME 377          
BLAST of Gchil3360.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 164 bits (416), Expect = 9.000e-42
Identity = 126/386 (32.64%), Postives = 182/386 (47.15%), Query Frame = 0
Query:   41 VLVMAKRNYKVYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPL-RSLIRSETVPDVSDANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVDAIRPRLKQVELEDGSTVPIVCQPLKRASRKHVPLPAAQEPTPANRNCTKLRVASSVTIPPESQVMVSVSSRQHGLRVVQPLPSLYEKFQ-LTVANGIVQVTPNSPFRVLVANLGKAPQTLAKNQVIGSVTLHPLAM--LPTKVTAAEVLGITPSTEDGLPVSGAE---TSGEAQQLALDKTVKTDAFTTSLVPTPDTRAQPTSYDKIDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKAR 419
            V  +A RNYKV A +G+    +     +LDTGAGPN+I E++LP    R  I       +  A    L   G I L V+LG + V+  FIV   LAA  ILGC + DR V AI P+ K+V L +GS +PI+         +    P    P+      TK+RV+  + +PP S+ +V V     GLR +Q    L +    + +ANG+ ++ PN PF V V N     + L K  V+G    HP A+  L  +    E       T D  P +      T G+ ++   +             P PD          ++     E + L H+    R ++  ML +  +MW G LG++ +T HRIDL+P  +PV   PYRAGP+AR
Sbjct:   20 VCSLATRNYKVSATVGVSATVLRPVSAILDTGAGPNLIKETILPEDWERYRIPGPPAFHIVGAGGRRLLQKGNITLTVQLGTIKVQARFIVVDGLAAECILGCQFIDRQVQAIHPKEKRVTLANGSVIPIIHDSGPPVCGRPSTPPKELPPS------TKVRVSKMIVLPPRSECVVPVQCAAPGLRFLQA--RLRDNATGVHMANGVAEIWPNQPFTVRVVNTSMKTRRLPKGMVLGHALPHPTAIGGLDRRHRCCE------RTSDSEPFACCRRNFTVGDQEKEGKNLPPMEYGLERDPPPLPD-------RPDVEGDTWQEAVQLGHLQGEERAKILDMLAKHRSMWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRAR 384          
BLAST of Gchil3360.t1 vs. uniprot
Match: A0A2V3IQ80_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ80_9FLOR)

HSP 1 Score: 141 bits (355), Expect = 1.480e-35
Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 0
Query:    7 KILTRKDTADADSKHLGV---LRRPWIR-IRNNRIPDRVLVMAKRNYKVYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPLRSLIRSETVPDVSDANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVDAIRPRLKQVELEDGSTVPI 169
            K+L R + +    K + +   L+RP  R +   R  D VL+MA RNYKVYAD+GL    + R L VLDTGAGPN    S L     + ++   +PD+ DAN  P+K+ G I LVV+ G  V +L+FIVC +LA+PV+LGCDY DRFV+ IRP+ ++VEL++G TVPI
Sbjct:   95 KVLLRPERSSNVGKGMQLECALKRPCRRYVCPERRTDYVLIMAHRNYKVYADIGLSKSLLSRRLAVLDTGAGPNFTRLSELDSDEPAGMQKACLPDIRDANKRPIKSLGTIKLVVQHGNHVFRLSFIVCTTLASPVVLGCDYFDRFVETIRPKNREVELDEGFTVPI 261          
BLAST of Gchil3360.t1 vs. uniprot
Match: UPI001E1DEA69 (uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69)

HSP 1 Score: 145 bits (367), Expect = 4.550e-35
Identity = 117/390 (30.00%), Postives = 181/390 (46.41%), Query Frame = 0
Query:   34 NNRIPDRVLVMAKRNYKVYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPL-RSLIRSETVPDVSDANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVDAIRPRLKQVELEDGSTVPIVCQPLKRASRKHVPLPAAQEPTPANRNCTKLRVASSVTIPPESQVMVSVSSRQHGLRVVQPLPSLYEKFQLTVANGIVQVTPNSPFRVLVANLGKAPQTLAKNQVIGSVTLHPLAMLPTKVTAAEVLGITPSTEDGLPVSGAETSGEAQQLALDKTVKTDAFTTSLVPTPDTRAQPTSYDKIDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKAREEE 422
            +  + + V +    NYK+   +G     +     VLDTGAG N++ + VLP    R L+    +P +++A+   +   GVI L V++G +V ++ F V   L  P ILGC + +  V  I P+ ++V+L +G ++ I        S  H   P  +E  P+N    K+R+A    IP   +  V+V++   GL +   L        +++A+G+  V  N PFRV + N      TL+K  V+GS TL P  ++ T     E L IT + +D  P S  E +                      P P     PTS+         +D+ L H+ +  R  +  ML     MWDG LG +  T HRI++   A+PV   PYRAG +AR  E
Sbjct:   47 SEEVVESVFLFKSHNYKLCVSIGATAAVLYPLQAVLDTGAGINLVRDDVLPENWERMLLPGVALPRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRNIHPKERRVDLNEGGSIAIT----SGVSACHAVTPT-REIIPSN----KVRIAQRTVIPARCEAHVAVTTAITGLCL---LTHSSRSQVVSLASGVADVRSNVPFRVRLLNPSDRSITLSKGMVVGSATLRPQRII-TVDPGVETL-ITQADKDCDPTSSMEQTE---------------------PPP-----PTSWK--------DDVRLDHLELEERQAVLRMLEPHHKMWDGHLGTVAATSHRIEVTAGAKPVHCQPYRAGSRARSAE 388          
BLAST of Gchil3360.t1 vs. uniprot
Match: UPI001E1DE006 (uncharacterized protein LOC123544159 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE006)

HSP 1 Score: 122 bits (305), Expect = 1.440e-27
Identity = 100/333 (30.03%), Postives = 156/333 (46.85%), Query Frame = 0
Query:   90 LIRSETVPDVSDANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVDAIRPRLKQVELEDGSTVPIVCQPLKRASRKHVPLPAAQEPTPANRNCTKLRVASSVTIPPESQVMVSVSSRQHGLRVVQPLPSLYEKFQLTVANGIVQVTPNSPFRVLVANLGKAPQTLAKNQVIGSVTLHPLAMLPTKVTAAEVLGITPSTEDGLPVSGAETSGEAQQLALDKTVKTDAFTTSLVPTPDTRAQPTSYDKIDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKAREEE 422
            L+    +P +++A+   +   GVI L V++G +V ++ F V   L  P ILGC + +  V +I P+ ++V+L +G ++ I        S  H   P  +E  P+N    K+R+A    IP   +  V+V++   GL +   L        +++A+G+  V  N PFRV + N      TL+K  V+GS TL P  ++ T     E L IT + ED       +T+   +Q                 P P     PTS+         +D+ L H+ +  R  +  ML     MWDG LG +  T HRI++   A+PV   PYRAG +AR  E
Sbjct:    2 LLPGVALPRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRSIHPKERRVDLNEGGSIAIT----SGVSACHAVTPT-RERIPSN----KVRIAQRTVIPARCEAHVAVTTAIAGLCL---LTHSSRSQVVSLASGVADVRSNVPFRVRLLNPSDRSITLSKGMVVGSATLRPQRII-TVDPGVETL-ITQADED------CDTTSSMEQTE---------------PPP-----PTSWK--------DDVRLDHLELEERQAVLRMLEPHHKMWDGHLGTVAATSHRIEVTAGAKPVHCQPYRAGSRARSAE 286          
BLAST of Gchil3360.t1 vs. uniprot
Match: R7QJR5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR5_CHOCR)

HSP 1 Score: 84.7 bits (208), Expect = 1.670e-15
Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 0
Query:  339 PDTRAQPTSYDKIDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKARE 420
            P  R +P   D       +E+LDLSHVP   R+R R M ++++ +WDG+LGEI TT HRI+L+P+ RP+A+ PYRAGPK  E
Sbjct:   26 PQRRIEPPPPD-------VEELDLSHVPDRLRERFRRMSKKYSRVWDGTLGEIYTTVHRIELIPETRPIAKAPYRAGPKVCE 100          
BLAST of Gchil3360.t1 vs. uniprot
Match: A0A2V3IJC9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC9_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 1.070e-13
Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    6 VKILTRKDTADADSKHL---GVLRRPWIR-IRNNRIPDRVLVMAKRNYKVYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPLRSLIRSETVPDVSDANNNPLKT 109
            +KIL R + +    K +     L+RPW   +   R  D V++MA+RNYKVYAD+G     + R L VLDTGAGPN I    L    RS I+   +PD+ DAN  P+K+
Sbjct:   23 LKILLRSERSSNVGKRVQLDSALKRPWRGYVDMPRKTDYVMIMARRNYKVYADIGSSKSLLSRRLAVLDTGAGPNFIRLYELQSDERSRIQEACLPDIRDANKRPIKS 130          
BLAST of Gchil3360.t1 vs. uniprot
Match: R7QTY1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTY1_CHOCR)

HSP 1 Score: 71.6 bits (174), Expect = 7.460e-10
Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 0
Query:  383 MWDGSLGEINTTEHRIDLLPDARPVAQPPYRAGPKAREEE 422
            MWDG+LGEINTT HRI+L+P+ RP+AQ PYRAGPKARE E
Sbjct:    1 MWDGTLGEINTTVHRIELIPETRPIAQDPYRAGPKAREVE 40          
The following BLAST results are available for this feature:
BLAST of Gchil3360.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
UPI001E1D3E382.030e-4732.73uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1DB02D9.000e-4232.64uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
A0A2V3IQ80_9FLOR1.480e-3547.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI001E1DEA694.550e-3530.00uncharacterized protein LOC123544193 n=1 Tax=Merce... [more]
UPI001E1DE0061.440e-2730.03uncharacterized protein LOC123544159 n=1 Tax=Merce... [more]
R7QJR5_CHOCR1.670e-1550.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IJC9_9FLOR1.070e-1342.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTY1_CHOCR7.460e-1077.50Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 63..145
e-value: 5.65073E-6
score: 42.7088
IPR036157dUTPase-like superfamilySUPERFAMILY51283dUTPase-likecoord: 190..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:421196..422464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3360.t1Gchil3360.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000168_pilon 421196..422464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3360.t1 ID=Gchil3360.t1|Name=Gchil3360.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=423bp
MPRSPVKILTRKDTADADSKHLGVLRRPWIRIRNNRIPDRVLVMAKRNYK
VYADLGLHTQFMVRYLTVLDTGAGPNVIVESVLPPPLRSLIRSETVPDVS
DANNNPLKTAGVIDLVVRLGRMVVKLTFIVCRSLAAPVILGCDYCDRFVD
AIRPRLKQVELEDGSTVPIVCQPLKRASRKHVPLPAAQEPTPANRNCTKL
RVASSVTIPPESQVMVSVSSRQHGLRVVQPLPSLYEKFQLTVANGIVQVT
PNSPFRVLVANLGKAPQTLAKNQVIGSVTLHPLAMLPTKVTAAEVLGITP
STEDGLPVSGAETSGEAQQLALDKTVKTDAFTTSLVPTPDTRAQPTSYDK
IDPIKALEDLDLSHVPVSHRDRLRGMLREFTTMWDGSLGEINTTEHRIDL
LPDARPVAQPPYRAGPKAREEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036157dUTPase-like_sf