Gchil7330.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7330.t1
Unique NameGchil7330.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length365
Homology
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A2V3J5T0_9FLOR (Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T0_9FLOR)

HSP 1 Score: 138 bits (347), Expect = 7.650e-35
Identity = 119/355 (33.52%), Postives = 156/355 (43.94%), Query Frame = 0
Query:    1 MTLPVCAACTHAEPSVYCEADMAFLCALCDHSIHSANKLAQRHKRVSINGVHHDDAMVTTMRHHATPLECSESSTLPSLSHDGVLNSLLCGAQHSVATKXXXXXXXXXXXXXXXXXXXXTLXTGAGTVSTATTDTITACTAHTAGSSSSPPLFGMEHLFDALVPQGMNQQXXXXXXRSHGATHLSWIAGAFVKKEADTLLNNSGFALPASRRPSRAVDGVXXXXXXXXXXXXXXXXXXXXMVPHLRGVVAPLDALVAPVGATLKAEPSASMWHEASAKXXXXXXXXPWVDNDTAMQQHGDERWTATRWQQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFVGRNA 355
            M+  +CA+C   + SVYC+AD A+LC +CDHSIHSANKL++RH R+ I    H+++         T L+ SESSTLPS   D +++ L  G   +                                                         F ++ L D++VPQ  +              HL+ +AGA+VKKEA+TLL +SG +L A         G+                           VV  + AL      T  AEP      EAS+            D+++ M           R + R  AL+RFR KRANRSF KRVRYACRKQLADSRPRVKGRFVGR A
Sbjct:    1 MSTTLCASCRTIDASVYCQADSAYLCTICDHSIHSANKLSRRHSRIPI----HNNSFSPIAPSTDTLLDHSESSTLPSAETDNLISILPPGVSSNA--------------------------------------------------------FSVDDLLDSIVPQPNDD-------------HLTSMAGAYVKKEAETLLQSSGLSLDAMVPQLDVWSGLHQVPQQPGRRSRPPTSSFD-----FSAVVPNMPALQPQP--TSSAEPVVPTQSEASSTD----------DSESIM---------LKRKRHRLAALERFRNKRANRSFRKRVRYACRKQLADSRPRVKGRFVGRKA 256          
BLAST of Gchil7330.t1 vs. uniprot
Match: R7QSJ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ2_CHOCR)

HSP 1 Score: 93.2 bits (230), Expect = 1.150e-17
Identity = 110/381 (28.87%), Postives = 141/381 (37.01%), Query Frame = 0
Query:    1 MTLPVCAACTHAEPSVYCEADMAFLCALCDHSIHSANKLAQRHKRVSINGVHHDDAMVTTMRHHATPLECSESSTLPSLSHDGVLNSLLCGAQHSVATKXXXXXXXXXXXXXXXXXXXXTLXTGAGTVSTATTDTITACTAHTAGSSSSPPLFGMEHLFD-------ALVPQGMNQQXXXXXXRSHGATH---------LSWIAGAFVKKEADTLLNNSGFALPASRRPSRAVDGVXXXXXXXXXXXXXXXXXXXXMVPHLRGVVAPLDALVAPVGATLKAEPSASMWHEASAKXXXXXXXXPWVDNDTAMQQHGDERWTATRWQQ-----RAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFVGRNATAVTG 360
            MT   CAAC  A  S+YC +D A LC  CD  +H AN+LA+RH RV +N     D M      H+ P     + +    S              S AT                        +G G V                    +  L+   H F        +L P   +QQ       +  A H         L  IAGAFVK+E  TL  +S    P     +  +D +                       H  G  +      A +      + S       S+         P  D    ++  G    +A R ++     R  AL+RFR KRANRSF K+VRYACRKQLADSRPRVKGRFVGR  T  TG
Sbjct:    1 MTPRWCAACRAAPASIYCPSDTAILCTACDILVHEANQLARRHTRVPLNLF---DNMGVPQVEHSPPTHFHGAQSTDKSS--------------SAATAFDESDES----------------SGGGVV------------------PDTDDLYPEHHTFADTQVADISLSPPTKHQQPSSWAHEAQSAPHPVADTNTECLKTIAGAFVKQEIQTLFESSQRQSPPKATHANGLDFLWMRDSLPPALLCDGTSTTLTGTRH--GFDSKQVLSAAQIALQNSLDQSLLDDVLGSSLSTDEDISIPGADILDGLKIEGAALTSAERSREQKRLDRQAALRRFRHKRANRSFRKKVRYACRKQLADSRPRVKGRFVGRAKTTSTG 328          
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A2V3IC69_9FLOR (Zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC69_9FLOR)

HSP 1 Score: 78.6 bits (192), Expect = 2.650e-13
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 MTLPVCAACTHAEPSVYCEADMAFLCALCDHSIHSANKLAQRHKRVSINGVHHDDAMVTTMRHHATPLECSESSTLPSLSHDGVLNSL 88
            M+  +CA+C   + SVYC+AD A+LC +CDHSIHSANKL++RH R+ I    H+++         T L+ SESSTLPS   D +++ L
Sbjct:    1 MSTTLCASCRTIDASVYCQADSAYLCTICDHSIHSANKLSRRHSRIPI----HNNSFSPIAPSTDTLLDHSESSTLPSAETDNLISIL 84          
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A2V3IE76_9FLOR (Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE76_9FLOR)

HSP 1 Score: 68.2 bits (165), Expect = 2.300e-9
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0
Query:  313 EALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFV 351
            EAL+RFR KRANRSF KRVRY CRKQLADSRPRVKGRFV
Sbjct:  202 EALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFV 240          
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A199W420_ANACO (Zinc finger protein CONSTANS-LIKE 4 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199W420_ANACO)

HSP 1 Score: 59.7 bits (143), Expect = 1.740e-7
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  309 QQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFVGRNATAVT 359
            ++R E ++R+R KR  R+FHK++ YACRK LADSRPRV+GRF  RN  A T
Sbjct:   28 EERKERIERYRSKRHQRNFHKKITYACRKTLADSRPRVRGRFA-RNGDAET 77          
BLAST of Gchil7330.t1 vs. uniprot
Match: R7QFM0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM0_CHOCR)

HSP 1 Score: 62.4 bits (150), Expect = 3.630e-7
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
Query:  315 LQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFV 351
            L RFR KRANRSF K+VRY CRKQLADSRPRVKGRFV
Sbjct:  281 LARFRSKRANRSFTKKVRYECRKQLADSRPRVKGRFV 317          
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A6V7QXJ0_ANACO (CCT domain-containing protein n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QXJ0_ANACO)

HSP 1 Score: 59.7 bits (143), Expect = 1.300e-6
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  309 QQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFVGRNATAVT 359
            ++R E ++R+R KR  R+FHK++ YACRK LADSRPRV+GRF  RN  A T
Sbjct:  130 EERKERIERYRSKRHQRNFHKKITYACRKTLADSRPRVRGRFA-RNGDAET 179          
BLAST of Gchil7330.t1 vs. uniprot
Match: UPI001CC50686 (two-component response regulator-like APRR1 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC50686)

HSP 1 Score: 56.6 bits (135), Expect = 2.150e-6
Identity = 24/42 (57.14%), Postives = 37/42 (88.10%), Query Frame = 0
Query:  309 QQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRF 350
            ++R E ++R+R KR+ R+F+K+++YACRK LADSRPR++GRF
Sbjct:   39 EERKERIERYRSKRSQRNFNKKIKYACRKTLADSRPRIRGRF 80          
BLAST of Gchil7330.t1 vs. uniprot
Match: UPI001922DABC (zinc finger protein CONSTANS-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001922DABC)

HSP 1 Score: 58.5 bits (140), Expect = 2.240e-6
Identity = 25/43 (58.14%), Postives = 39/43 (90.70%), Query Frame = 0
Query:  309 QQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFV 351
            Q++ E +QR+R KR +R+F+K+++YACRK+LADSRPR++GRF+
Sbjct:  133 QEKRERIQRYRTKRNHRNFNKKIKYACRKRLADSRPRIRGRFI 175          
BLAST of Gchil7330.t1 vs. uniprot
Match: A0A6P5HLT1_ANACO (transcription factor GHD7-like n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5HLT1_ANACO)

HSP 1 Score: 59.7 bits (143), Expect = 2.480e-6
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  309 QQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRFVGRNATAVT 359
            ++R E ++R+R KR  R+FHK++ YACRK LADSRPRV+GRF  RN  A T
Sbjct:  216 EERKERIERYRSKRHQRNFHKKITYACRKTLADSRPRVRGRFA-RNGDAET 265          
The following BLAST results are available for this feature:
BLAST of Gchil7330.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5T0_9FLOR7.650e-3533.52Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracil... [more]
R7QSJ2_CHOCR1.150e-1728.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IC69_9FLOR2.650e-1346.59Zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Gracil... [more]
A0A2V3IE76_9FLOR2.300e-989.74Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracil... [more]
A0A199W420_ANACO1.740e-758.82Zinc finger protein CONSTANS-LIKE 4 n=1 Tax=Ananas... [more]
R7QFM0_CHOCR3.630e-786.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6V7QXJ0_ANACO1.300e-658.82CCT domain-containing protein n=2 Tax=Ananas comos... [more]
UPI001CC506862.150e-657.14two-component response regulator-like APRR1 n=1 Ta... [more]
UPI001922DABC2.240e-658.14zinc finger protein CONSTANS-like n=1 Tax=Hibiscus... [more]
A0A6P5HLT1_ANACO2.480e-658.82transcription factor GHD7-like n=1 Tax=Ananas como... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 1..48
e-value: 3.7E-12
score: 56.4
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 4..48
e-value: 5.4E-6
score: 26.5
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 1..48
score: 10.096428
IPR010402CCT domainPFAMPF06203CCTcoord: 311..352
e-value: 4.7E-18
score: 65.0
IPR010402CCT domainPROSITEPS51017CCTcoord: 311..353
score: 15.15986
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 4..355
NoneNo IPR availableCDDcd19821Bbox1_BBX-likecoord: 5..48
e-value: 1.64662E-13
score: 62.3151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:368773..369867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7330.t1Gchil7330.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 368773..369867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7330.t1 ID=Gchil7330.t1|Name=Gchil7330.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=365bp
MTLPVCAACTHAEPSVYCEADMAFLCALCDHSIHSANKLAQRHKRVSING
VHHDDAMVTTMRHHATPLECSESSTLPSLSHDGVLNSLLCGAQHSVATKH
TARTEDTARTTTSASTTTGTLTTGAGTVSTATTDTITACTAHTAGSSSSP
PLFGMEHLFDALVPQGMNQQQQQQQQRSHGATHLSWIAGAFVKKEADTLL
NNSGFALPASRRPSRAVDGVDGMDGVDGMDGVDGMDGMDGMVPHLRGVVA
PLDALVAPVGATLKAEPSASMWHEASAKHEPAQRHDPWVDNDTAMQQHGD
ERWTATRWQQRAEALQRFRKKRANRSFHKRVRYACRKQLADSRPRVKGRF
VGRNATAVTGGDGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR010402CCT_domain
IPR045281CONSTANS-like