Gchil7317.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7317.t1
Unique NameGchil7317.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length310
Homology
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BLAST of Gchil7317.t1 vs. uniprot
Match: A0A2V3J704_9FLOR (Tyrosine aminotransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J704_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 2.300e-25
Identity = 96/291 (32.99%), Postives = 152/291 (52.23%), Query Frame = 0 
Query:   21 STFKGRQIPKHIVASFPKSRLLSELSGSTRCRGDSFPPPNKNKRSKSRPQKTEDLLSSFSISSAIEDFQEKFGKSPPKSNGKARPQSSKSKKSNTSFH-QRTLEXXXXXXXXXXXXXXXTPGLLREELELFGLLDEEDGVVPPPNAKEILSSSSDINLEKQNDDELRSLTGISQLGLSKDTLRSDGY----RRSQMDPRKADPENMKQRLDKVKQRRKRLAAERGEESMKTLLNFVNTTSVSSSSRKLRSED-IPRLERQNLKKAVLFTLKRSRVIDYNEERASAHGCEIT 305
            S+F G+Q+ +H        R+  +     RC  +S   P ++ +S +  Q  + L S   ++ +I    +K G+ P +S+  A  +  KS  S  S+  +++L                    L++EL L+ + D++D          ILS  SD+  E+ N++  R      QL  S  T++ D Y    RRSQ DPR+ +  +MK RLD VK+RRK+LAAE GEE+MKTL++     + + S   L   D I R+ERQ +KKA +FTL RSR+I++ +ER + +GC +T
Sbjct:   20 SSFCGQQLSRHRAIVPRNPRIGDDSLCHVRCL-ESSDIPLEDLKSLTNYQ--QQLASDVDVTKSIGMLSQKMGRFPTESSIAASTKRRKSSGSKESYQDEQSLR-------------------LKQELALYNITDDDDDTNLSSEENAILSLLSDLESEEHNEENDRP-----QLDASNLTIKDDAYLYNARRSQSDPREVNAVDMKNRLDMVKRRRKKLAAESGEEAMKTLISIAPNDADTLSQGNLYGHDYISRVERQKMKKAAMFTLSRSRIINFEQERVNPNGCALT 283
The following BLAST results are available for this feature:
BLAST of Gchil7317.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J704_9FLOR2.300e-2532.99Tyrosine aminotransferase n=1 Tax=Gracilariopsis c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:102083..103088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7317.t1Gchil7317.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 102083..103088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7317.t1 ID=Gchil7317.t1|Name=Gchil7317.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=310bp
MLTFIHSYGAFSLADLRTSASTFKGRQIPKHIVASFPKSRLLSELSGSTR
CRGDSFPPPNKNKRSKSRPQKTEDLLSSFSISSAIEDFQEKFGKSPPKSN
GKARPQSSKSKKSNTSFHQRTLETPLEQQNLDTSLEEQTPGLLREELELF
GLLDEEDGVVPPPNAKEILSSSSDINLEKQNDDELRSLTGISQLGLSKDT
LRSDGYRRSQMDPRKADPENMKQRLDKVKQRRKRLAAERGEESMKTLLNF
VNTTSVSSSSRKLRSEDIPRLERQNLKKAVLFTLKRSRVIDYNEERASAH
GCEITRSQE*
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