Gchil7038.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7038.t1
Unique NameGchil7038.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length131
Homology
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A2V3J710_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J710_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 6.310e-55
Identity = 87/128 (67.97%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    1 MTTPRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISDSLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQPVQTDPNFSQVLYQQL 128
            MTTPR KLPVY+KLNQ+AP THG  ++VQVV+K T  D  D  GRR   Q VLVAD+TGAM LNAH+  CDKL   +VVELH+VRVKL N+ MRLTMDKWASV+++F+ IPQ VQTDPNFS V+YQQL
Sbjct:    1 MTTPRHKLPVYLKLNQMAPNTHGHNIVVQVVNKKTTVDKTDANGRRVRQQQVLVADDTGAMYLNAHNVICDKLTEGKVVELHDVRVKLFNNCMRLTMDKWASVNETFKAIPQKVQTDPNFSHVVYQQL 128          
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A087HKS3_ARAAL (Ob-fold nucleic acid binding domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HKS3_ARAAL)

HSP 1 Score: 76.3 bits (186), Expect = 3.510e-15
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0
Query:    2 TTPRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISDSLDKAGRRRCHQ--HVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQPVQTDPNFSQVLYQ 126
            TT   + PV+VK++QL PGT G  LIV+VV  N +  ++ K G  R  +    L+ D+TG +L  A +D  D +     + L N ++ +  D MR+ +DKW  +  +   +   V  D N S V Y+
Sbjct:    4 TTITKRKPVFVKVDQLKPGTKGHTLIVKVVVSNPVKPAIHKNGPTRSPRIAECLIGDDTGCILFTARNDQVDIMKTGATIILRNAKIDMFKDTMRMAVDKWGLIEVT-NPVSFEVNQDNNLSLVEYE 129          
BLAST of Gchil7038.t1 vs. uniprot
Match: UPI0010A449F9 (uncharacterized protein At4g28440-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A449F9)

HSP 1 Score: 76.3 bits (186), Expect = 4.460e-15
Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 0
Query:    2 TTPRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTI-----SDSLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP----VQTDPNFSQVLYQ 126
            +TP  + PV+VK++QL PGT+G  L+V+VVS NT+       +  +  R       LV DETGA+L  A ++  D +  +  V L N ++ +    MRL +DKW  +      + +P    V+ D N S V Y+
Sbjct:   11 STPVKRKPVFVKVDQLKPGTNGHNLVVKVVSANTVLQKGRPSTSSRNPRPTLIAECLVGDETGAILFTARNEQVDLMKPESTVILRNAKIDMFKGSMRLAVDKWGRIE-----VTEPANFVVKEDNNLSLVEYE 139          
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A6N2BFP4_SOLCI (Uncharacterized protein n=2 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=A0A6N2BFP4_SOLCI)

HSP 1 Score: 74.7 bits (182), Expect = 1.570e-14
Identity = 46/130 (35.38%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    4 PRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISD---SLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP----VQTDPNFSQVLYQ 126
            PR + PV+VK+  L PGT+G  LIV+V+  NT+     S+    R       L+ DETG +L  A +D  D +  D  V L N ++ +    MRL +DKW  V      + +P    V+ D N S V Y+
Sbjct:   12 PRLRKPVFVKVENLTPGTNGHTLIVKVLESNTVLQKGRSVSPHLRNTRIAECLIGDETGTILFTARNDQVDLMKADATVILRNAKIDMFKSTMRLAVDKWGRVE-----VTEPAAFEVKQDNNLSLVEYE 136          
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A0A0L242_CUCSA (Uncharacterized protein n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0L242_CUCSA)

HSP 1 Score: 73.6 bits (179), Expect = 5.930e-14
Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 0
Query:    4 PRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISD---SLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP--VQTDPNFSQVLYQ 126
            P  + PV+VK+ QL PGT+G  LIV+VVS NT+     S+ +  R+      LV DETG +L  A +D  D++     + L N ++ +    MRL +DKW  +  +    P+   V+ D N S V Y+
Sbjct:   23 PGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVDKWGRIELAD---PEDFVVKEDNNLSLVEYE 147          
BLAST of Gchil7038.t1 vs. uniprot
Match: UPI0010A46D62 (uncharacterized protein At4g28440-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A46D62)

HSP 1 Score: 73.2 bits (178), Expect = 7.140e-14
Identity = 45/130 (34.62%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    4 PRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISDSLDKAGRRRCHQHV---LVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP----VQTDPNFSQVLYQ 126
            P  + PV+VK++QL PGT G  LIV+V+  NT+      A +   H  V   LV DETG +L  A ++  D +     V L N ++ +    MRL +DKW  +      + +P    V+ D N S V Y+
Sbjct:   17 PALRKPVFVKVDQLKPGTSGHTLIVKVLDSNTVLQKGRSASQHLRHTRVSECLVGDETGCILFTARNEQVDTMRPGATVILRNAKIDMFKGSMRLAVDKWGRIE-----VTEPAEFLVKEDNNLSLVEYE 141          
BLAST of Gchil7038.t1 vs. uniprot
Match: W9R7A6_9ROSA (Uncharacterized protein n=1 Tax=Morus notabilis TaxID=981085 RepID=W9R7A6_9ROSA)

HSP 1 Score: 72.8 bits (177), Expect = 1.050e-13
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    4 PRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISD---SLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQPVQ----TDPNFSQVLYQ 126
            P  + PV++K++QL PGT G  L+V+V+S NT+     S+    R+      L++DETG ++  A +D  D +  D  + L N +V +    MRL +DKW  V      + +P Q     D N S V Y+
Sbjct:   18 PGLRKPVFIKVDQLKPGTSGHTLVVKVLSSNTVLQKGRSVSHHLRQTRIAECLISDETGTIVFTARNDQVDLMKPDTTIILRNAKVDMFKGSMRLAVDKWGRVE-----VTEPAQFVVKEDNNLSLVEYE 142          
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A2R6QLF8_ACTCC (Nucleic acid-binding, OB-fold protein n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6QLF8_ACTCC)

HSP 1 Score: 72.8 bits (177), Expect = 1.230e-13
Identity = 46/129 (35.66%), Postives = 66/129 (51.16%), Query Frame = 0
Query:    9 PVYVKLNQLAPGTHGQKLIVQVVSKNTI-------SDSLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP----VQTDPNFSQVLYQ 126
            PV+VK++QL PGT+G  L V+VVS  T+       +  L + G  +     LV DETG +L  A +D  D +  D  V L N ++ +    MRL +DKW  V      + +P    V+ D N S V Y+
Sbjct:   26 PVFVKVDQLKPGTNGHTLTVKVVSSTTVVQRKGNSNSHLGRGGGGQSLAECLVGDETGTILFTARNDQVDLMKPDTTVILRNAKIDMFKGAMRLAVDKWGRVE-----VTEPAEFVVKEDNNLSLVEYE 149          
BLAST of Gchil7038.t1 vs. uniprot
Match: A0A5J4ZBS5_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZBS5_9ASTE)

HSP 1 Score: 72.8 bits (177), Expect = 1.340e-13
Identity = 46/137 (33.58%), Postives = 69/137 (50.36%), Query Frame = 0
Query:    4 PRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTI----------SDSLDKAGRRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQP----VQTDPNFSQVLYQ 126
            P  + PV++K++QL PGT G  L V+V+  NT+          S  L + GR R  +  L+ DETG +L  A +D  D +  D  V L N ++ +    MRL +DKW  +      + +P    V+ D N S V Y+
Sbjct:   23 PGMRKPVFIKVDQLKPGTSGHTLTVKVLISNTVLQNKGRNAATSQILHRGGRTRIAE-CLIGDETGTILFTARNDQIDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRIE-----VTEPANFVVKEDNNLSLVEYE 153          
BLAST of Gchil7038.t1 vs. uniprot
Match: UPI000539D5CA (uncharacterized protein At4g28440-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI000539D5CA)

HSP 1 Score: 72.0 bits (175), Expect = 1.740e-13
Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    2 TTPRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISDSLDKAG-----RRRCHQHVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKWASVHQSFRVIPQPVQTDPNFSQVLYQ 126
            T P+ K PV+VK++QL PGT G  L V+VV  N +  +  K+      R       L+ D+TG +L  A +D  D +     V L N ++ +  D MR+ +DKW  +  +  V P  V  + N S V Y+
Sbjct:    6 TVPKRK-PVFVKVDQLKPGTSGHNLTVKVVESNPVKAATRKSSFTQQVRSSRIAECLIGDDTGCILFTARNDQVDLMKTGATVILRNAKIDMFKDTMRMAVDKWGRIEVTDHV-PFAVNLNNNLSLVEYE 133          
The following BLAST results are available for this feature:
BLAST of Gchil7038.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J710_9FLOR6.310e-5567.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A087HKS3_ARAAL3.510e-1533.86Ob-fold nucleic acid binding domain-containing pro... [more]
UPI0010A449F94.460e-1534.33uncharacterized protein At4g28440-like n=1 Tax=Pro... [more]
A0A6N2BFP4_SOLCI1.570e-1435.38Uncharacterized protein n=2 Tax=Solanum subgen. Ly... [more]
A0A0A0L242_CUCSA5.930e-1435.94Uncharacterized protein n=7 Tax=Cucurbitaceae TaxI... [more]
UPI0010A46D627.140e-1434.62uncharacterized protein At4g28440-like n=1 Tax=Pro... [more]
W9R7A6_9ROSA1.050e-1333.85Uncharacterized protein n=1 Tax=Morus notabilis Ta... [more]
A0A2R6QLF8_ACTCC1.230e-1335.66Nucleic acid-binding, OB-fold protein n=3 Tax=Acti... [more]
A0A5J4ZBS5_9ASTE1.340e-1333.58Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]
UPI000539D5CA1.740e-1333.85uncharacterized protein At4g28440-like n=3 Tax=Cam... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 10..123
e-value: 1.6E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR31472:SF5OS05G0244600 PROTEINcoord: 7..126
NoneNo IPR availablePANTHERPTHR31472OS05G0244600 PROTEINcoord: 7..126
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 9..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:244390..244926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7038.t1Gchil7038.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 244390..244926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7038.t1 ID=Gchil7038.t1|Name=Gchil7038.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=131bp
MTTPRSKLPVYVKLNQLAPGTHGQKLIVQVVSKNTISDSLDKAGRRRCHQ
HVLVADETGAMLLNAHDDFCDKLLVDQVVELHNVRVKLVNDHMRLTMDKW
ASVHQSFRVIPQPVQTDPNFSQVLYQQLPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold