Gchil7049.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7049.t1
Unique NameGchil7049.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1200
Homology
BLAST of Gchil7049.t1 vs. uniprot
Match: A0A2V3J6M0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6M0_9FLOR)

HSP 1 Score: 526 bits (1356), Expect = 3.690e-171
Identity = 276/565 (48.85%), Postives = 391/565 (69.20%), Query Frame = 0
Query:  638 MCAMAKEEVLDPIKAVKVVMKSFPSAANVRPQCRRSYLKLLGVAAGGEGGKKRQRMMQMVTKLLRSCLTELSPAKTTSSNE-TTSCLSWGDVQQAALSLTEFTAEEILRSAFLDDEPLIGLEEEKKRLDKIDASTAQFIQGVLMTSDCARLNDSRAANALEMLVEKIVLHEWKTRKKSSFDPERVGKLRATSEALRRARKAQGLIQEEDLPPEDQARTTFLGATTSFPIGVIRSVFQFCVDEQQNTGTSKGVNYKPSGMAMRVITNTKIASPALPWVSMIEEVLCSKETEPSIRASCLAILRGIRDNSFELNEKKSKWFGSQCPLFGDKNSIASVESKQLFLGMAELFPSDLGRLLRHSGKGMSDNMIEELIRSCEQISEDGEGLQVAVEGLFRIICDRERHFDDHFKKKMEHMLVEMGLRRCQSSAALDMIMNTDSSNPSVIRIASEYGNFQSVSYAVQGLFSEAHGNSE--LAEAVGRAVRQLPFSQRRDVVMMMFGSKTFASEMAEKEMFDRAIEVSAHALMVGGLVPGGKELLYASLCTSRKHEQEMIQRLLSYIFSVIKR 1199
            M  MAKE VLD +KAVKVV+KSF     V  Q RRSYL+LLGV AGG+  KK  +++Q+V  +LR  LT L+P+ T SS++ +T+ LSW D+QQAA SL++F+ +EILR AF D+EPL  +EEEKKRL++ID+ +AQF++ V++ +   R   + A+  ++ LVEKIV HEWK R+KSSFDPER+GKLRAT+EALRRARK QGLI + +      AR+TFL AT SFP GV+R+VF+ CV +++N   +  +     G++M  + NTKI +PALPW +MI E + S+ ++   R+ C  +LR IRD++FE+ EK++ WFG Q PLF D+ ++   E+ +LF+GMAELFPSDL RLLR   K +S+ +++E  R+C Q+  +G  L+VAV+ LF+ +CDRER  DDH ++++E + V  GL+RC+++  + +I   D SNPSVIR++  YG  Q+V+ AVQGL S      +  L    GRAVR LPFS RRD+++ +FG ++  S    +   + +IE++AHAL VG L+P G  +LYA+L  S K EQ MI  LL+YI S I +
Sbjct:    1 MYVMAKEGVLDAVKAVKVVLKSFSVVTTVSAQARRSYLRLLGVIAGGQRNKKSLKVVQVVIAMLRQTLTHLNPSSTQSSSKGSTNYLSWEDIQQAASSLSQFSVDEILRVAFADEEPLANMEEEKKRLERIDSDSAQFVREVIIAAGHTRAGGNSASRHIQELVEKIVEHEWKIRRKSSFDPERIGKLRATTEALRRARKTQGLIDDSEDDAHGHARSTFLRATRSFPTGVLRTVFELCVLDRENAQKNDSIAMSICGISMSALANTKILTPALPWAAMINETI-SQTSDTFARSICFLVLRSIRDDNFEIKEKQNMWFGPQSPLFDDETNLPLGEAAELFIGMAELFPSDLERLLRTRYKIISNELLKEFTRACAQLDSEGNALKVAVDALFKPVCDRERSCDDHARQELEQIYVTAGLKRCEANVTMSLISRADHSNPSVIRLSCLYGTHQTVNIAVQGLLSRTVNTQDARLNGTAGRAVRLLPFSHRRDILLKLFGDRSVGSN---ERALEGSIEIAAHALTVGALLPAGNGVLYATLSGSEKKEQRMILSLLTYISSAINK 561          
BLAST of Gchil7049.t1 vs. uniprot
Match: A0A2V3J6N9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6N9_9FLOR)

HSP 1 Score: 387 bits (993), Expect = 9.610e-118
Identity = 218/545 (40.00%), Postives = 326/545 (59.82%), Query Frame = 0
Query:    4 TSLSGAKSRADLQNSISDSKQFEKALADCFVDGSRAAAETASIFLCKEATTAIRAKDLGNAVKTLPNAVSTENAEPLAYASAFLATGFDDDRCKEPLRAFSFTRREVKMEALRAVTDLMAQKLAVGKETFSTLLHRVGSILLESTSDVSEMDLYVIVKGVTSLSDFVTEESKKEILSFALDLCDGRSPYIQLDGVRPLSPRFQGLYITDIVRIADDVYSTSRILSRCLISCLEFGDATAFETLWDLHSEWVLDALELSGFDLAVFSLSIVTGQLALRGNLRACARAMGIVXXXXXXXXXXXXXXXXXXXXXXXSVFQAVGSIGIAVGAEQLAKAAAYVIRLAKDMASGDDSLRTELLSNTDEALREAARRKWPASALVLGVLRKLIISWKSSKSTEDWIRGDFEVLVKESAGLFDSDENGVGGVNSLAQDSKARDTSQDVESDKRFVDLP-AFVVLGTLFVLMRHENSRIRFVSLQLLRRVRKESLFVFYFPSVMMLLQEERNGLIVAGFLREILTSPGLMSSMEASNVAFSTLMRLSRSHINSE 547
            TSL  AK+R +L+ S SDS  FE+ L DCFVDGSRAAAETAS FL  +AT+   A+ + N +K+LP AV++ NA PLA  +AF+A GFD   C  PLR+F F+  EVK  A+ AV  +++ KL++      +LL +      + ++++SE++L  +V+ +T ++    EE++ ++LS  LDL  G SP ++      LS RF+  Y  +I   A D+ S + ++  CL   +EFGDA+A   +W  H +WV++  E +  D+ + +L  + GQ A +GN+  C   +  +                        +  ++GSIG+A GAE+LAK  A +IRLAKD +SG+     E L    +A+ E+ +RKWP S+LV  VLRKL++ WK    TE W++ DF VL++    L+  ++   G V+SL++   A +      +  R    P A  ++GTL  LM H++ R+R  SL+LL++VRK SL VF+ PS+M+L+++E NG I A +LRE+LT PG MS  E SNV  STL+RLS +HINSE
Sbjct:    6 TSLDSAKARTELEKSFSDSGLFERTLVDCFVDGSRAAAETASHFLRNQATSQSAAEYISNGIKSLPTAVASTNAPPLAAVAAFIALGFDGQVCNAPLRSFCFSNHEVKRAAIEAVIRILSLKLSLSGGDCDSLLQKAAKFFGDVSAELSEVELSFMVREITGITSHAYEENQGQLLSLLLDLGAGNSPCLEQGSSHRLSTRFESFYAVEIANSAFDLESITAVVLHCLCRGIEFGDASAIRAVWKSHKDWVIEVFESTHCDMFLAALCTIAGQQAWQGNIDFCQDVLDALRQALNCVMSTSSKVSEVIVLFVSGICVSIGSIGMAAGAEELAKNCASIIRLAKDSSSGNACPAEECLDGMSQAVCESVKRKWPVSSLVFAVLRKLLLVWKYPSFTEAWLKEDFVVLLESRTKLYVKEDLQYGVVDSLSKVENAENLMPVGRTVLRASAEPVALPIVGTLITLMSHKHPRVRLSSLELLQKVRKSSLLVFFLPSIMVLMEKESNGFIAAKYLREVLTCPGFMSRTETSNVVLSTLLRLSGAHINSE 550          
BLAST of Gchil7049.t1 vs. uniprot
Match: R7Q4M8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4M8_CHOCR)

HSP 1 Score: 348 bits (892), Expect = 6.620e-99
Identity = 281/1016 (27.66%), Postives = 482/1016 (47.44%), Query Frame = 0
Query:  210 ITDIVRIADDVYSTSRILSRCLISCLEFGDATAFETLWDLHSEWVLDALELSGFDLAVFSLSIVTGQLALRGNLRACARAMGIVXXXXXXXXXXXXXXXXXXXXXXXSVFQAVGSIGIAVGAEQLAKAAAYVIRLAKDMASGDDSLRTELLSNTDEALREAARRKWPASALV-LGVLRKLIISWKSSKSTEDWIRGDFEVLVKES-------AGLFDSDENGVGGVNSLAQDSKARDTSQDVE------SDKRFVDLPAFVVLGTLFVLMRHENSRIRFVSLQLLRRVRKESLFVFYFPSVMMLLQEERNGLIVAGFLREILTSPGLMSSMEASNVAFSTLMRLS---RSHINSEVYGTVLVAFAWASEYAPSIGIRLLARELETLKSSFDSVRAQIRTAAAAAVHKLAEVRPSRCVDLIPFISLCITPKSMEVAPQATSLCFDVMCAMAKEEVLDPIKAVKVVMKSFPSAANVRPQCRRSYLKLLGVAAGGEGGKKRQRMMQMVTKLLRSCLTELSPAKTTSSNETTSCLSWGDVQQAALSLTEFTAEEILRSAFLDDEPLIGLEEEKKRLDKIDASTAQFIQGVLMTSDCARLNDSRAANALEMLVEKIVLHEWKTRKKSSFDPERVGKLRATSEALRRAR-KAQGLIQEEDLP-----PEDQARTTFLGATTSFPIGVIRSVFQFCVDEQQNTGTSKGVN---YKPSGMAMRVITNTKIASPALPWVSMIEEVLCSKETEPSIRASCLAILRGIRDNSFELNEKKSKWFG-SQCP--LFGDKNSIASVE---SKQLFLGMAELFPSDLGRLLRHSGKGMSDNMIEELIRSCEQISEDG--EGLQVAVEGLFRIICDRERHFDDHFKKKMEHMLVEMGLRRCQSSAALDMIMNTDSSNPSVIRIAS---EYGNFQSVSYAV--QGLFSEAHGNSELAEAVGRAVRQLPFSQRRDVVMMMFGSKTFASEMAEKEMFDRAIEVSAHALMVGGLVPGGKELLYASLCTSRKHEQEMI 1186
            + +++ +A++V + ++I++R L+  LE G A     LW  H   V+DA+   G  +  F L  V G  A  G +  C   + ++                       SV  +         A  +A+ AA V ++ +  +    +   + L    + + E A      +A++ LGVLRK++ +W  ++  + +    F  L+  S       A  F   +  +G  NSL +DS       ++        +K  +   A +++GTL     H ++++R+ + + + ++      +F+ P+V+  +Q+E +G+IV  FLR+IL    L++  + S V   T+++L+   +    +  Y T L+A A AS+ AP I   +L  E+E LKSSF+++    + AA AAV ++  +RP+R    +PFI  C T ++M+ AP A + CFD +  MA+ EVLD  KAVKV++K+FP+   V    RRSYL+LLG  +     KK   +      +L+ CL +  P+     N     L+W  +  AA +L E+T +EILR A    EPL    +E KRL+ I A   QFI  VL T+  A  + S     +  L+E +  HEW  R++SSFDP+R+ KLRA SEALRR+R KAQ    +  +P      ED+    F+ A ++ P G IR     C        T +       +   +A+ V+      SPALPW+ ++E++L S  + P+ RA+ L  L  ++D+SF  N  + +WFG S+C   +   + +I + E   +++  LGM     ++LG++L H   G S +    ++      + DG  E     V    + IC      D+  +K    + V+  L+R         ++    S P  IR++    +Y   ++ + AV   G+        E    +G  ++++ F+QR  V   + G + +   + +        E+ A  L    ++P G   L A+     + E+ ++
Sbjct:    1 MAELLAMAEEVRAMAKIVARALVQALESGAAATVLELWGAHRAKVVDAVPFVGAQVVAFVLVSVAGMNACTGRVSECHGLLAMMRALFMEGDAAVGCVHPLVAALVASVCVSXXXXXXXXXAADVARDAAAVCQVFQTASKSTSASSNDKLEQGLQLVCEEAMHWRRGNAMLSLGVLRKMLRTWGDAEGVKRYTDDFFSDLLSRSVFRDKAEAPSFVLADREIG--NSLNRDSLEDALRHEMPPPCNSPEEKSSLVALASILIGTL----SHSHAQVRYAACRAISQIGSSPSRLFFLPAVVTQMQKESSGVIVTMFLRDILLPRCLLAQKQTSKVVMKTMIQLAHPGKGMNATATYHTGLLAIAAASKSAPGIASSVLLAEVENLKSSFEALHPTTKCAACAAVLEITTIRPTRGASFVPFIMRCTTKETMQAAPLAAAFCFDSIRVMAENEVLDATKAVKVILKTFPNTFEVAIVARRSYLRLLGCVSSRSETKKGAVIAGKAIDILKGCLVDGVPS---GDNSEGVALNWRQIDVAASALAEYTTDEILRMAHAGVEPLDDANDESKRLESISAECQQFIINVLSTTGSAMRHHSHGMPGMRKLLEGMAKHEWDNRQRSSFDPKRIAKLRAASEALRRSRRKAQTAQSQVGVPNLEAAEEDRPTAQFIRAVSTLPTGAIRGFCARCAFTSSEAATFENTADSLRETRAVAIDVLQTAGALSPALPWLGLVEDILESSSSVPAERAAALRALAQMQDSSFATNHARMRWFGGSECTRVMSAIQETIKADERREAREALLGMTMYQSAELGKVLEHVVGGCSASATLAIVIDA-LAATDGPTESFVSQVRVTLQTICTAGVKLDEATQK----IFVDGCLKRLDLEIMRASLIELVPS-PVAIRLSCLTHDYKLLRACANAVVCDGIDMSNKDGMESVSMLGAELQRMEFAQRMAVAQDLAGKRAYGRPVGK--------ELVASCLGTAAILPDGDGCLVAASALCGEKERGLV 993          
The following BLAST results are available for this feature:
BLAST of Gchil7049.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6M0_9FLOR3.690e-17148.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6N9_9FLOR9.610e-11840.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4M8_CHOCR6.620e-9927.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 458..681

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:287473..291072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7049.t1Gchil7049.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 287473..291072 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7049.t1 ID=Gchil7049.t1|Name=Gchil7049.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1200bp
MSYTSLSGAKSRADLQNSISDSKQFEKALADCFVDGSRAAAETASIFLCK
EATTAIRAKDLGNAVKTLPNAVSTENAEPLAYASAFLATGFDDDRCKEPL
RAFSFTRREVKMEALRAVTDLMAQKLAVGKETFSTLLHRVGSILLESTSD
VSEMDLYVIVKGVTSLSDFVTEESKKEILSFALDLCDGRSPYIQLDGVRP
LSPRFQGLYITDIVRIADDVYSTSRILSRCLISCLEFGDATAFETLWDLH
SEWVLDALELSGFDLAVFSLSIVTGQLALRGNLRACARAMGIVLQLVKQI
TRTASRVTTFVSLFISSVFQAVGSIGIAVGAEQLAKAAAYVIRLAKDMAS
GDDSLRTELLSNTDEALREAARRKWPASALVLGVLRKLIISWKSSKSTED
WIRGDFEVLVKESAGLFDSDENGVGGVNSLAQDSKARDTSQDVESDKRFV
DLPAFVVLGTLFVLMRHENSRIRFVSLQLLRRVRKESLFVFYFPSVMMLL
QEERNGLIVAGFLREILTSPGLMSSMEASNVAFSTLMRLSRSHINSEVYG
TVLVAFAWASEYAPSIGIRLLARELETLKSSFDSVRAQIRTAAAAAVHKL
AEVRPSRCVDLIPFISLCITPKSMEVAPQATSLCFDVMCAMAKEEVLDPI
KAVKVVMKSFPSAANVRPQCRRSYLKLLGVAAGGEGGKKRQRMMQMVTKL
LRSCLTELSPAKTTSSNETTSCLSWGDVQQAALSLTEFTAEEILRSAFLD
DEPLIGLEEEKKRLDKIDASTAQFIQGVLMTSDCARLNDSRAANALEMLV
EKIVLHEWKTRKKSSFDPERVGKLRATSEALRRARKAQGLIQEEDLPPED
QARTTFLGATTSFPIGVIRSVFQFCVDEQQNTGTSKGVNYKPSGMAMRVI
TNTKIASPALPWVSMIEEVLCSKETEPSIRASCLAILRGIRDNSFELNEK
KSKWFGSQCPLFGDKNSIASVESKQLFLGMAELFPSDLGRLLRHSGKGMS
DNMIEELIRSCEQISEDGEGLQVAVEGLFRIICDRERHFDDHFKKKMEHM
LVEMGLRRCQSSAALDMIMNTDSSNPSVIRIASEYGNFQSVSYAVQGLFS
EAHGNSELAEAVGRAVRQLPFSQRRDVVMMMFGSKTFASEMAEKEMFDRA
IEVSAHALMVGGLVPGGKELLYASLCTSRKHEQEMIQRLLSYIFSVIKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold