Gchil7082.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7082.t1
Unique NameGchil7082.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length254
Homology
BLAST of Gchil7082.t1 vs. uniprot
Match: A0A2V3IPG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPG6_9FLOR)

HSP 1 Score: 268 bits (684), Expect = 1.660e-86
Identity = 148/247 (59.92%), Postives = 187/247 (75.71%), Query Frame = 0
Query:    1 MSASPPPT-PSPSDEQPDN---RYARFSEFSITTGDAKLQNDLAKELNWQATRTITNQNIESTIQMRIDAVSDLLSELYTNSERDIFRRNEELAIRTSLPNISKWNQQLIQGHKASKLRRSEISKELAIVHALLKRTARTRSKSKRKSPKTPSSLASHLTSTLPSRATLLADVRRLSAPNAVLFTVVICTLALESFESVVSQENGPSTLANYAAFVSAFVVSCTYFHTLRSAHCRARADLRKRSVAF 243
            M A+PPP+ PS + + P++   RYARFSEF+   GDA +Q+DL +E+ WQATRT+T QN+ESTIQ++IDAVSDLLS+LYT SERDI +RNEELAIRTSLP ISKWNQQLI+GHKASKLR+SEISKELA+V ALLKR  R +    R+S +   S + H+    PS + LL  +  + APNA+LFT+V+C LALESF+++ SQENGPSTLA+YAAF S F++SC Y   LR+A+  A   LR  S  F
Sbjct:   40 MRATPPPSDPSQAGQPPEDHDFRYARFSEFNSNHGDAVVQDDLVREVLWQATRTVTTQNMESTIQVQIDAVSDLLSDLYTKSERDIVKRNEELAIRTSLPTISKWNQQLIKGHKASKLRQSEISKELAVVDALLKRATRRKKNQYRRSTQLSMSSSQHV----PSLSFLLKQLFNIRAPNALLFTLVVCVLALESFDNIASQENGPSTLASYAAFTSLFLISCAYLRALRAAYTHANTRLRISSSTF 282          
BLAST of Gchil7082.t1 vs. uniprot
Match: R7QSC1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSC1_CHOCR)

HSP 1 Score: 146 bits (369), Expect = 2.100e-39
Identity = 95/218 (43.58%), Postives = 129/218 (59.17%), Query Frame = 0
Query:   11 PSDEQPDNRYARFSEFSITTGDAKLQNDLAKELNWQATRTITNQNIESTIQMRIDAVSDLLSELYTNSERDIFRRNEELAIRTSLPNISKWNQQLIQGHKASKLRRSEISKELAIVHALLKRTARTRSKSKRKSPKTPSSLASHLTSTLPSRATLLADVRRLSAPNAVLFTVVICTLALESFESVVSQENGPSTLANYAAFVSAFVVSCTYFHTLRSA 228
            PSD   D    RF EF+   GD  +Q+ L +E+ W+ TRT T   +E+TIQ  + AVSD L+++Y+ S+RD+  R EELA R SL NISKWNQQLIQG K SK  RSEISKELA+V  +L+R  R R K    S    +++A          A     V++ S P  +LFTV++C  AL  FE V  QE+GP+ LA  AA  S  +++   + ++  A
Sbjct:   47 PSDS--DGGLGRFREFTSRDGDHGVQDALEREVLWEVTRTATTHTLETTIQDELKAVSDSLADMYSRSDRDLPSRQEELARRASLANISKWNQQLIQGAKMSKSNRSEISKELAVVQVMLRRNRRGREKXXXXS----ATVAQRRRDGDVGYALDEEAVKQASKPIRLLFTVMVCVSALTGFEHVAVQESGPTQLAKGAAAFSLVLLTGACWRSIGEA 258          
The following BLAST results are available for this feature:
BLAST of Gchil7082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IPG6_9FLOR1.660e-8659.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSC1_CHOCR2.100e-3943.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 248..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 224..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 204..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000131_piloncontigtig00000131_pilon:543897..544658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7082.t1Gchil7082.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000131_pilon 543897..544658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7082.t1 ID=Gchil7082.t1|Name=Gchil7082.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=254bp
MSASPPPTPSPSDEQPDNRYARFSEFSITTGDAKLQNDLAKELNWQATRT
ITNQNIESTIQMRIDAVSDLLSELYTNSERDIFRRNEELAIRTSLPNISK
WNQQLIQGHKASKLRRSEISKELAIVHALLKRTARTRSKSKRKSPKTPSS
LASHLTSTLPSRATLLADVRRLSAPNAVLFTVVICTLALESFESVVSQEN
GPSTLANYAAFVSAFVVSCTYFHTLRSAHCRARADLRKRSVAFMNKGAQK
KQR*
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