Gchil7600.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7600.t1
Unique NameGchil7600.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length303
Homology
BLAST of Gchil7600.t1 vs. uniprot
Match: A0A2V3ITN1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITN1_9FLOR)

HSP 1 Score: 337 bits (863), Expect = 2.150e-112
Identity = 178/273 (65.20%), Postives = 202/273 (73.99%), Query Frame = 0
Query:   46 RDDHSERIHYTNEFDVYQKPRANGNGMTKRARCNHCNGDWAYNETRLKHHIIDPYRGCRRVPPEIRDRIRSVDAQNSVTASAAXXXXXXXXXXXXXX----------AVHTPVLGTHISPHQPLPPPSKRKREATLTALATSSSPPPALRPSMVGLHAESTMNAHL------------CASNHDVQANGAAHDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQC 296
            R+  +ERIHYTNEF +YQK RANG+G TKRARCNHC  DWA+NETRLKHHI DPYRGCRRVPPE+R+RIR+ DAQN+ T++A+    XXXXX               A+H P+LGTHISPHQPLPP +KRKREA+LT LAT    P      + G H+E+ +  HL             A    +  N   + T VRVAVEFSMTSGGLLRATWIA+ELISEFHRDILDVGLIPRT+ENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQC
Sbjct:   34 RERQTERIHYTNEFHIYQKARANGSGFTKRARCNHCENDWAFNETRLKHHITDPYRGCRRVPPEVRERIRAADAQNAGTSAASLRAAXXXXXTSTLVQNTAVAATQAAIHAPLLGTHISPHQPLPP-TKRKREASLTNLAT----PTTTAQQLQGAHSEAEIGVHLPPSSEAHSPLVAAAGGSTLGTNSNNNGTDVRVAVEFSMTSGGLLRATWIASELISEFHRDILDVGLIPRTSENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQC 301          
BLAST of Gchil7600.t1 vs. uniprot
Match: B1M3A2_METRJ (Conserved hypothetical selenoprotein n=8 Tax=Methylobacterium TaxID=407 RepID=B1M3A2_METRJ)

HSP 1 Score: 61.6 bits (148), Expect = 1.950e-8
Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 0
Query:  207 DVQANGAAHDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRN 294
            DV A GAA     RVA+ +      LLRA W+A EL+S F  D+ +V L+P T   TF I +G  + W R      PD   L+  +R+
Sbjct:   13 DVTAEGAAGPGRPRVAITYCTQCNWLLRAAWMAQELLSTFRDDLGEVALVPATG-GTFRIELGAALLWERVRDGGFPDVKALKQRVRD 99          
BLAST of Gchil7600.t1 vs. uniprot
Match: UPI0011D1999E (SelT/SelW/SelH family protein n=3 Tax=Cycloclasticus TaxID=34067 RepID=UPI0011D1999E)

HSP 1 Score: 58.9 bits (141), Expect = 1.270e-7
Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0
Query:  215 HDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQCC 297
            +D   R+ +++      LLRA W+A EL++ F  ++  V LIP +   TF I I GK  WSR + Q  P+   ++  +R++ C
Sbjct:    3 YDDKPRIEIQYCTQCRWLLRAAWLAQELLTTFEEELGGVTLIPASG-GTFEITINGKQLWSRKLAQRFPEAKEIKQRVRDELC 84          
BLAST of Gchil7600.t1 vs. uniprot
Match: A0A4R2GPX3_9HYPH (Selenoprotein W-related protein n=1 Tax=Camelimonas lactis TaxID=659006 RepID=A0A4R2GPX3_9HYPH)

HSP 1 Score: 58.5 bits (140), Expect = 1.660e-7
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:  220 RVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRN 294
            RV++EF      LLRA W+A EL+S F +D+ +V L+PRT    F I +   + W R V    PD  +L+  +R+
Sbjct:    5 RVSIEFCTQCQWLLRAAWMAQELLSTFGQDLGEVALLPRTG-GVFRIQVNDSLIWDRAVDGGFPDARNLKQRVRD 78          
BLAST of Gchil7600.t1 vs. uniprot
Match: UPI001AE45B22 (SelT/SelW/SelH family protein n=1 Tax=Microlunatus capsulatus TaxID=99117 RepID=UPI001AE45B22)

HSP 1 Score: 57.8 bits (138), Expect = 4.910e-7
Identity = 27/83 (32.53%), Postives = 45/83 (54.22%), Query Frame = 0
Query:  213 AAHDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQ 295
            AA     RV + +      LLRATW+A+EL++ F  D+ +V L+P T    F + +G  + W R V    P+   L+ ++R++
Sbjct:   11 AATPASARVEITYCTQCRWLLRATWVASELLTTFGTDLAEVALVPGTG-GVFRVRLGEDVVWDRSVDGGFPELADLKRVVRDR 92          
BLAST of Gchil7600.t1 vs. uniprot
Match: D8K799_NITWC (Uncharacterized protein n=5 Tax=Nitrosococcus TaxID=1227 RepID=D8K799_NITWC)

HSP 1 Score: 57.0 bits (136), Expect = 5.500e-7
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0
Query:  220 RVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQ 295
            +V +++      LLRA WIA EL++ F ++I ++ L P T    FNI   GK+ WSR      P+   L+ ++RNQ
Sbjct:    4 KVEIQYCTGCRWLLRAAWIAQELLTTFEQEISELTLRPGTG-GVFNILANGKLVWSRKEAGRFPEITELKRLVRNQ 78          
BLAST of Gchil7600.t1 vs. uniprot
Match: A0A3A0A5R6_9CHLR (Selenoprotein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3A0A5R6_9CHLR)

HSP 1 Score: 56.2 bits (134), Expect = 1.060e-6
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  220 RVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQ 295
            RVA+ +      LLRA W+A EL++ F ++I +V LIP +    F +++G    WSRG     PD   L+ ++R++
Sbjct:    6 RVAIRYCTQCRWLLRAAWMAQELLTTFEQEIGEVALIPGSG-GVFEVFVGETRIWSRGEEGRFPDIKELKQLVRDR 80          
BLAST of Gchil7600.t1 vs. uniprot
Match: UPI001EE18DFD (SelT/SelW/SelH family protein n=1 Tax=Methylobacterium persicinum TaxID=374426 RepID=UPI001EE18DFD)

HSP 1 Score: 56.6 bits (135), Expect = 1.110e-6
Identity = 30/87 (34.48%), Postives = 45/87 (51.72%), Query Frame = 0
Query:  209 QANGAAHDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQ 295
            +A   A    +RVA+ + +    LLRA W+A EL+S F  D+ +V L+P T    F I  GG + W R      PD   L+  +R++
Sbjct:   12 EATVGAATPRLRVAITYCVQCNWLLRAAWMAQELLSTFKDDLAEVSLVPATG-GAFRIEAGGTLLWERVRDGGFPDVKALKQRVRDR 97          
BLAST of Gchil7600.t1 vs. uniprot
Match: A0A2W4RGJ2_9GAMM (Selenoprotein W-related protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4RGJ2_9GAMM)

HSP 1 Score: 55.8 bits (133), Expect = 1.430e-6
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 0
Query:  220 RVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQ 295
            RV +EF      LLRA W+A EL++ F  +I +V LIP T    F +  GG++ WSR      P+   L+  +R+Q
Sbjct:    6 RVEIEFCTQCRWLLRAAWLAQELLTTFETEIGEVALIPGTG-GIFEVRCGGQVLWSRKQEGRFPEAKELKQRVRDQ 80          
BLAST of Gchil7600.t1 vs. uniprot
Match: A0A2H6ALP9_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6ALP9_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 2.370e-6
Identity = 27/75 (36.00%), Postives = 42/75 (56.00%), Query Frame = 0
Query:  220 RVAVEFSMTSGGLLRATWIAAELISEFHRDILDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRN 294
            RV +E+      L+RA W+A EL++ F  +I +V LIP T    F I + GK+ WSR      P+   L+ ++R+
Sbjct:    6 RVEIEYCTKCRWLMRAAWVAQELLTTFESEIGEVALIPGTG-GVFEIRVDGKLIWSRKSQGRFPELKELKQLVRD 79          
The following BLAST results are available for this feature:
BLAST of Gchil7600.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3ITN1_9FLOR2.150e-11265.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
B1M3A2_METRJ1.950e-838.64Conserved hypothetical selenoprotein n=8 Tax=Methy... [more]
UPI0011D1999E1.270e-733.73SelT/SelW/SelH family protein n=3 Tax=Cycloclastic... [more]
A0A4R2GPX3_9HYPH1.660e-738.67Selenoprotein W-related protein n=1 Tax=Camelimona... [more]
UPI001AE45B224.910e-732.53SelT/SelW/SelH family protein n=1 Tax=Microlunatus... [more]
D8K799_NITWC5.500e-736.84Uncharacterized protein n=5 Tax=Nitrosococcus TaxI... [more]
A0A3A0A5R6_9CHLR1.060e-635.53Selenoprotein n=1 Tax=Chloroflexi bacterium TaxID=... [more]
UPI001EE18DFD1.110e-634.48SelT/SelW/SelH family protein n=1 Tax=Methylobacte... [more]
A0A2W4RGJ2_9GAMM1.430e-638.16Selenoprotein W-related protein n=1 Tax=Candidatus... [more]
A0A2H6ALP9_9BACT2.370e-636.00Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011893Selenoprotein, Rdx-typePFAMPF10262Rdxcoord: 220..294
e-value: 5.7E-9
score: 36.0
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 212..296
e-value: 2.9E-12
score: 48.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..168
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 34..41
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 219..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:2177964..2179018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7600.t1Gchil7600.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 2177964..2179018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7600.t1 ID=Gchil7600.t1|Name=Gchil7600.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=303bp
MNFSAVSPDALEPSAVASPPASPLPAPNAPPPPPPPPPPPPPPPRRDDHS
ERIHYTNEFDVYQKPRANGNGMTKRARCNHCNGDWAYNETRLKHHIIDPY
RGCRRVPPEIRDRIRSVDAQNSVTASAAAAMASSTAAAAASAAVHTPVLG
THISPHQPLPPPSKRKREATLTALATSSSPPPALRPSMVGLHAESTMNAH
LCASNHDVQANGAAHDTHVRVAVEFSMTSGGLLRATWIAAELISEFHRDI
LDVGLIPRTAENTFNIWIGGKIAWSRGVGQPLPDYDHLRPIIRNQCCHAP
NV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011893Selenoprotein_Rdx-typ
IPR036249Thioredoxin-like_sf