Gchil3030.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3030.t1
Unique NameGchil3030.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length456
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000106_piloncontigtig00000106_pilon:1201052..1202419 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog523791.Kkor_0377
Preferred namekynU
PFAMsAminotran_5
Max annot lvl135619|Oceanospirillales
KEGG rclassRC00284,RC00415
KEGG koko:K01556
KEGG ReactionR00987,R02668,R03936
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Evalue4.58e-128
EggNOG OGsCOG3844@1|root,COG3844@2|Bacteria,1MUKN@1224|Proteobacteria,1RPY3@1236|Gammaproteobacteria,1XMD8@135619|Oceanospirillales
EC3.7.1.3
DescriptionCatalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3030Gchil3030Gracilaria chilensis NLEC103_M9 malegenetig00000106_pilon 1201052..1202419 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3030.t1.stop1Gchil3030.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000106_pilon 1201052..1201054 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3030.t1.CDS1Gchil3030.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000106_pilon 1201052..1202419 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3030.t1.exon1Gchil3030.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000106_pilon 1201052..1202419 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3030.t1.start1Gchil3030.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000106_pilon 1202417..1202419 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3030.t1Gchil3030.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000106_pilon 1201052..1202419 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3030.t1 ID=Gchil3030.t1|Name=Gchil3030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=456bp
MASKSSATSILNSPSFISPPKQHAEQPTSVSAFDELTAKRLDEHDPLRSF
RAHFSLPNRLYLCGQSLGACPHAAVDAVHKQLQRWQTLGVGAHFKGDQPW
AAFEKLPARLLVPLVGARFEHEVAVMGSLTVNLHAMLTAFYRARPGRYKV
LMEKHAFPSDVYAVRSHLSARGVDASDCILFAEPRHGQHLLRDDDLIELI
DANSHSLALILLPGVQYYSGQVFPMQLIAQRANHHGIPFGLDLAHAVGNI
ELSLHEWQVDFGVWCSYKYLNSGPGAVAGLFVHDRHADAHLPRHAGWWGH
CEQTRFQMPRTFEPQRGAKGFQVSNSAVLAVAPLSASLDIFHRAGGMSVL
RRKSVLLTEFLQMGLMTCVAEHVRIISPSQSARRGCQISVQLVACAVGAE
VVNALLEERGVVCDFRRPDVLRMALVPLYNSFTDVVLFVSELKEVLQSVQ
TQTSK*
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spliced messenger RNA

>Gchil3030.t1 ID=Gchil3030.t1|Name=Gchil3030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1368bp|location=Sequence derived from alignment at tig00000106_pilon:1201052..1202419- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTCCAAATCGTCGGCCACCTCCATCCTCAACAGCCCGTCCTTTAT
TTCACCCCCCAAACAGCACGCAGAACAGCCCACGTCGGTCTCCGCTTTCG
ATGAGCTCACCGCGAAACGCCTTGATGAACACGACCCGCTTCGCAGCTTT
CGTGCCCACTTCTCGCTCCCCAACCGCCTCTACCTGTGCGGACAGTCGCT
GGGCGCCTGCCCGCACGCCGCCGTCGACGCAGTGCACAAGCAGCTGCAGC
GCTGGCAGACGCTGGGCGTTGGCGCTCATTTCAAGGGCGACCAACCCTGG
GCTGCCTTCGAAAAACTGCCCGCACGACTGCTTGTCCCGCTTGTTGGCGC
CCGTTTTGAACATGAGGTGGCGGTCATGGGCTCGCTTACCGTCAATCTGC
ACGCCATGCTCACTGCCTTTTACCGCGCGCGCCCAGGCAGATACAAGGTT
TTGATGGAGAAGCATGCCTTCCCTTCGGATGTATACGCCGTGCGCTCGCA
CCTCAGCGCCAGAGGCGTTGATGCGTCTGACTGCATTCTGTTTGCTGAAC
CTCGTCACGGCCAACACTTGCTTCGAGATGATGATTTGATTGAGCTCATC
GATGCAAACTCACACAGCCTGGCGCTCATTCTGTTGCCTGGTGTGCAGTA
CTACAGCGGGCAGGTTTTCCCCATGCAGTTGATTGCGCAACGAGCAAATC
ATCACGGCATCCCATTCGGGCTGGACCTTGCGCACGCCGTAGGAAACATT
GAGCTCAGCCTGCATGAGTGGCAGGTGGATTTCGGCGTGTGGTGTTCGTA
CAAGTATTTGAACTCTGGACCAGGCGCTGTTGCCGGGCTGTTTGTGCACG
ATCGACACGCAGACGCGCATCTACCTCGACATGCGGGCTGGTGGGGGCAT
TGTGAACAAACGCGCTTTCAAATGCCTCGCACATTTGAGCCGCAACGCGG
CGCAAAAGGGTTCCAAGTTTCCAACAGCGCCGTGTTAGCCGTCGCGCCAC
TCAGCGCTTCTCTTGACATATTTCATCGCGCAGGCGGCATGAGCGTGTTG
AGAAGAAAGAGCGTTTTGCTGACAGAGTTTTTGCAGATGGGATTGATGAC
TTGCGTGGCCGAGCACGTGCGCATCATTTCTCCCTCTCAAAGTGCCAGAA
GAGGGTGTCAGATTTCTGTGCAACTGGTGGCATGCGCGGTGGGCGCGGAG
GTTGTGAATGCACTGCTTGAGGAAAGAGGGGTTGTGTGCGATTTTCGACG
CCCGGATGTGCTGAGGATGGCGCTGGTGCCGTTGTACAACAGCTTCACGG
ATGTGGTTTTGTTTGTTTCGGAGCTCAAGGAGGTGCTGCAAAGCGTGCAA
ACGCAAACGTCAAAGTAG
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protein sequence of Gchil3030.t1

>Gchil3030.t1 ID=Gchil3030.t1|Name=Gchil3030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=456bp
MASKSSATSILNSPSFISPPKQHAEQPTSVSAFDELTAKRLDEHDPLRSF
RAHFSLPNRLYLCGQSLGACPHAAVDAVHKQLQRWQTLGVGAHFKGDQPW
AAFEKLPARLLVPLVGARFEHEVAVMGSLTVNLHAMLTAFYRARPGRYKV
LMEKHAFPSDVYAVRSHLSARGVDASDCILFAEPRHGQHLLRDDDLIELI
DANSHSLALILLPGVQYYSGQVFPMQLIAQRANHHGIPFGLDLAHAVGNI
ELSLHEWQVDFGVWCSYKYLNSGPGAVAGLFVHDRHADAHLPRHAGWWGH
CEQTRFQMPRTFEPQRGAKGFQVSNSAVLAVAPLSASLDIFHRAGGMSVL
RRKSVLLTEFLQMGLMTCVAEHVRIISPSQSARRGCQISVQLVACAVGAE
VVNALLEERGVVCDFRRPDVLRMALVPLYNSFTDVVLFVSELKEVLQSVQ
TQTSK*
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mRNA from alignment at tig00000106_pilon:1201052..1202419-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3030.t1 ID=Gchil3030.t1|Name=Gchil3030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1368bp|location=Sequence derived from alignment at tig00000106_pilon:1201052..1202419- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGTCCAAATCGTCGGCCACCTCCATCCTCAACAGCCCGTCCTTTAT
TTCACCCCCCAAACAGCACGCAGAACAGCCCACGTCGGTCTCCGCTTTCG
ATGAGCTCACCGCGAAACGCCTTGATGAACACGACCCGCTTCGCAGCTTT
CGTGCCCACTTCTCGCTCCCCAACCGCCTCTACCTGTGCGGACAGTCGCT
GGGCGCCTGCCCGCACGCCGCCGTCGACGCAGTGCACAAGCAGCTGCAGC
GCTGGCAGACGCTGGGCGTTGGCGCTCATTTCAAGGGCGACCAACCCTGG
GCTGCCTTCGAAAAACTGCCCGCACGACTGCTTGTCCCGCTTGTTGGCGC
CCGTTTTGAACATGAGGTGGCGGTCATGGGCTCGCTTACCGTCAATCTGC
ACGCCATGCTCACTGCCTTTTACCGCGCGCGCCCAGGCAGATACAAGGTT
TTGATGGAGAAGCATGCCTTCCCTTCGGATGTATACGCCGTGCGCTCGCA
CCTCAGCGCCAGAGGCGTTGATGCGTCTGACTGCATTCTGTTTGCTGAAC
CTCGTCACGGCCAACACTTGCTTCGAGATGATGATTTGATTGAGCTCATC
GATGCAAACTCACACAGCCTGGCGCTCATTCTGTTGCCTGGTGTGCAGTA
CTACAGCGGGCAGGTTTTCCCCATGCAGTTGATTGCGCAACGAGCAAATC
ATCACGGCATCCCATTCGGGCTGGACCTTGCGCACGCCGTAGGAAACATT
GAGCTCAGCCTGCATGAGTGGCAGGTGGATTTCGGCGTGTGGTGTTCGTA
CAAGTATTTGAACTCTGGACCAGGCGCTGTTGCCGGGCTGTTTGTGCACG
ATCGACACGCAGACGCGCATCTACCTCGACATGCGGGCTGGTGGGGGCAT
TGTGAACAAACGCGCTTTCAAATGCCTCGCACATTTGAGCCGCAACGCGG
CGCAAAAGGGTTCCAAGTTTCCAACAGCGCCGTGTTAGCCGTCGCGCCAC
TCAGCGCTTCTCTTGACATATTTCATCGCGCAGGCGGCATGAGCGTGTTG
AGAAGAAAGAGCGTTTTGCTGACAGAGTTTTTGCAGATGGGATTGATGAC
TTGCGTGGCCGAGCACGTGCGCATCATTTCTCCCTCTCAAAGTGCCAGAA
GAGGGTGTCAGATTTCTGTGCAACTGGTGGCATGCGCGGTGGGCGCGGAG
GTTGTGAATGCACTGCTTGAGGAAAGAGGGGTTGTGTGCGATTTTCGACG
CCCGGATGTGCTGAGGATGGCGCTGGTGCCGTTGTACAACAGCTTCACGG
ATGTGGTTTTGTTTGTTTCGGAGCTCAAGGAGGTGCTGCAAAGCGTGCAA
ACGCAAACGTCAAAGTAG
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Coding sequence (CDS) from alignment at tig00000106_pilon:1201052..1202419-

>Gchil3030.t1 ID=Gchil3030.t1|Name=Gchil3030.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1368bp|location=Sequence derived from alignment at tig00000106_pilon:1201052..1202419- (Gracilaria chilensis NLEC103_M9 male)
ATGGCGTCCAAATCGTCGGCCACCTCCATCCTCAACAGCCCGTCCTTTAT
TTCACCCCCCAAACAGCACGCAGAACAGCCCACGTCGGTCTCCGCTTTCG
ATGAGCTCACCGCGAAACGCCTTGATGAACACGACCCGCTTCGCAGCTTT
CGTGCCCACTTCTCGCTCCCCAACCGCCTCTACCTGTGCGGACAGTCGCT
GGGCGCCTGCCCGCACGCCGCCGTCGACGCAGTGCACAAGCAGCTGCAGC
GCTGGCAGACGCTGGGCGTTGGCGCTCATTTCAAGGGCGACCAACCCTGG
GCTGCCTTCGAAAAACTGCCCGCACGACTGCTTGTCCCGCTTGTTGGCGC
CCGTTTTGAACATGAGGTGGCGGTCATGGGCTCGCTTACCGTCAATCTGC
ACGCCATGCTCACTGCCTTTTACCGCGCGCGCCCAGGCAGATACAAGGTT
TTGATGGAGAAGCATGCCTTCCCTTCGGATGTATACGCCGTGCGCTCGCA
CCTCAGCGCCAGAGGCGTTGATGCGTCTGACTGCATTCTGTTTGCTGAAC
CTCGTCACGGCCAACACTTGCTTCGAGATGATGATTTGATTGAGCTCATC
GATGCAAACTCACACAGCCTGGCGCTCATTCTGTTGCCTGGTGTGCAGTA
CTACAGCGGGCAGGTTTTCCCCATGCAGTTGATTGCGCAACGAGCAAATC
ATCACGGCATCCCATTCGGGCTGGACCTTGCGCACGCCGTAGGAAACATT
GAGCTCAGCCTGCATGAGTGGCAGGTGGATTTCGGCGTGTGGTGTTCGTA
CAAGTATTTGAACTCTGGACCAGGCGCTGTTGCCGGGCTGTTTGTGCACG
ATCGACACGCAGACGCGCATCTACCTCGACATGCGGGCTGGTGGGGGCAT
TGTGAACAAACGCGCTTTCAAATGCCTCGCACATTTGAGCCGCAACGCGG
CGCAAAAGGGTTCCAAGTTTCCAACAGCGCCGTGTTAGCCGTCGCGCCAC
TCAGCGCTTCTCTTGACATATTTCATCGCGCAGGCGGCATGAGCGTGTTG
AGAAGAAAGAGCGTTTTGCTGACAGAGTTTTTGCAGATGGGATTGATGAC
TTGCGTGGCCGAGCACGTGCGCATCATTTCTCCCTCTCAAAGTGCCAGAA
GAGGGTGTCAGATTTCTGTGCAACTGGTGGCATGCGCGGTGGGCGCGGAG
GTTGTGAATGCACTGCTTGAGGAAAGAGGGGTTGTGTGCGATTTTCGACG
CCCGGATGTGCTGAGGATGGCGCTGGTGCCGTTGTACAACAGCTTCACGG
ATGTGGTTTTGTTTGTTTCGGAGCTCAAGGAGGTGCTGCAAAGCGTGCAA
ACGCAAACGTCAAAGTAG
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