Gchil8577.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil8577.t1
Unique NameGchil8577.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length250
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:431285..432034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8577Gchil8577Gracilaria chilensis NLEC103_M9 malegenetig00000088_pilon 431285..432034 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8577.t1.stop1Gchil8577.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000088_pilon 431285..431287 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8577.t1.CDS1Gchil8577.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000088_pilon 431285..432034 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8577.t1.exon1Gchil8577.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000088_pilon 431285..432034 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8577.t1.start1Gchil8577.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000088_pilon 432032..432034 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil8577.t1Gchil8577.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000088_pilon 431285..432034 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil8577.t1 ID=Gchil8577.t1|Name=Gchil8577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=250bp
MPSLSTSFHLHSELEHLFQNPAASFGRGVFKRIVAERLSLPPPRDPPSPH
LANTWMLWVDKDTLAVFSKTNPDGFHETLRSKLRLSLNANTTEPLPTPVL
HATKPHYAKLLRRADSSGMLRWSVVEHEDPENFELADMLEMTLFWVTKSL
KEDRLTSWPRVQNALLPDPPHKPLPDPSIFNRITTGSKNLSGFYLDIQNI
FHNITLPSDLSLLFPMPKISLFALPSGLHSKLRERVSISSTNTNILLRP*
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spliced messenger RNA

>Gchil8577.t1 ID=Gchil8577.t1|Name=Gchil8577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=750bp|location=Sequence derived from alignment at tig00000088_pilon:431285..432034- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTTCCCTCAGCACCTCATTCCATCTCCACTCAGAGCTCGAACACCT
CTTCCAAAACCCAGCAGCTTCCTTCGGCCGTGGTGTTTTTAAGCGCATCG
TCGCCGAACGCCTATCACTCCCGCCCCCGCGAGATCCTCCTTCTCCTCAT
CTGGCAAACACATGGATGTTGTGGGTCGACAAAGACACTCTCGCGGTGTT
TTCGAAGACCAACCCAGACGGATTCCACGAAACGCTACGTAGCAAGCTCC
GCTTGTCGCTAAACGCGAACACGACAGAGCCGCTCCCCACGCCGGTATTG
CACGCAACCAAGCCCCACTACGCGAAGCTATTGAGAAGGGCTGACTCGTC
TGGCATGCTCCGTTGGTCCGTCGTCGAACATGAAGACCCGGAGAACTTTG
AGCTCGCCGACATGCTCGAAATGACCCTGTTCTGGGTGACGAAGTCCTTA
AAGGAAGACCGTCTTACCTCGTGGCCCCGCGTACAGAACGCCCTTCTGCC
GGATCCACCGCACAAACCTCTGCCGGACCCAAGCATCTTCAACCGCATCA
CAACAGGGTCTAAGAATCTTTCGGGTTTCTATTTAGACATCCAAAACATA
TTCCACAACATTACACTTCCCTCCGATCTATCCCTATTATTTCCCATGCC
GAAGATCAGTCTCTTCGCGCTCCCTTCAGGGCTTCATTCAAAACTCCGCG
AGCGTGTATCAATTTCAAGCACCAACACCAATATCCTGCTGCGGCCCTGA
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protein sequence of Gchil8577.t1

>Gchil8577.t1 ID=Gchil8577.t1|Name=Gchil8577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=250bp
MPSLSTSFHLHSELEHLFQNPAASFGRGVFKRIVAERLSLPPPRDPPSPH
LANTWMLWVDKDTLAVFSKTNPDGFHETLRSKLRLSLNANTTEPLPTPVL
HATKPHYAKLLRRADSSGMLRWSVVEHEDPENFELADMLEMTLFWVTKSL
KEDRLTSWPRVQNALLPDPPHKPLPDPSIFNRITTGSKNLSGFYLDIQNI
FHNITLPSDLSLLFPMPKISLFALPSGLHSKLRERVSISSTNTNILLRP*
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mRNA from alignment at tig00000088_pilon:431285..432034-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil8577.t1 ID=Gchil8577.t1|Name=Gchil8577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=750bp|location=Sequence derived from alignment at tig00000088_pilon:431285..432034- (Gracilaria chilensis NLEC103_M9 male)
ATGCCTTCCCTCAGCACCTCATTCCATCTCCACTCAGAGCTCGAACACCT
CTTCCAAAACCCAGCAGCTTCCTTCGGCCGTGGTGTTTTTAAGCGCATCG
TCGCCGAACGCCTATCACTCCCGCCCCCGCGAGATCCTCCTTCTCCTCAT
CTGGCAAACACATGGATGTTGTGGGTCGACAAAGACACTCTCGCGGTGTT
TTCGAAGACCAACCCAGACGGATTCCACGAAACGCTACGTAGCAAGCTCC
GCTTGTCGCTAAACGCGAACACGACAGAGCCGCTCCCCACGCCGGTATTG
CACGCAACCAAGCCCCACTACGCGAAGCTATTGAGAAGGGCTGACTCGTC
TGGCATGCTCCGTTGGTCCGTCGTCGAACATGAAGACCCGGAGAACTTTG
AGCTCGCCGACATGCTCGAAATGACCCTGTTCTGGGTGACGAAGTCCTTA
AAGGAAGACCGTCTTACCTCGTGGCCCCGCGTACAGAACGCCCTTCTGCC
GGATCCACCGCACAAACCTCTGCCGGACCCAAGCATCTTCAACCGCATCA
CAACAGGGTCTAAGAATCTTTCGGGTTTCTATTTAGACATCCAAAACATA
TTCCACAACATTACACTTCCCTCCGATCTATCCCTATTATTTCCCATGCC
GAAGATCAGTCTCTTCGCGCTCCCTTCAGGGCTTCATTCAAAACTCCGCG
AGCGTGTATCAATTTCAAGCACCAACACCAATATCCTGCTGCGGCCCTGA
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Coding sequence (CDS) from alignment at tig00000088_pilon:431285..432034-

>Gchil8577.t1 ID=Gchil8577.t1|Name=Gchil8577.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=750bp|location=Sequence derived from alignment at tig00000088_pilon:431285..432034- (Gracilaria chilensis NLEC103_M9 male)
ATGCCTTCCCTCAGCACCTCATTCCATCTCCACTCAGAGCTCGAACACCT
CTTCCAAAACCCAGCAGCTTCCTTCGGCCGTGGTGTTTTTAAGCGCATCG
TCGCCGAACGCCTATCACTCCCGCCCCCGCGAGATCCTCCTTCTCCTCAT
CTGGCAAACACATGGATGTTGTGGGTCGACAAAGACACTCTCGCGGTGTT
TTCGAAGACCAACCCAGACGGATTCCACGAAACGCTACGTAGCAAGCTCC
GCTTGTCGCTAAACGCGAACACGACAGAGCCGCTCCCCACGCCGGTATTG
CACGCAACCAAGCCCCACTACGCGAAGCTATTGAGAAGGGCTGACTCGTC
TGGCATGCTCCGTTGGTCCGTCGTCGAACATGAAGACCCGGAGAACTTTG
AGCTCGCCGACATGCTCGAAATGACCCTGTTCTGGGTGACGAAGTCCTTA
AAGGAAGACCGTCTTACCTCGTGGCCCCGCGTACAGAACGCCCTTCTGCC
GGATCCACCGCACAAACCTCTGCCGGACCCAAGCATCTTCAACCGCATCA
CAACAGGGTCTAAGAATCTTTCGGGTTTCTATTTAGACATCCAAAACATA
TTCCACAACATTACACTTCCCTCCGATCTATCCCTATTATTTCCCATGCC
GAAGATCAGTCTCTTCGCGCTCCCTTCAGGGCTTCATTCAAAACTCCGCG
AGCGTGTATCAATTTCAAGCACCAACACCAATATCCTGCTGCGGCCCTGA
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