Gchil8701.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8701.t1
Unique NameGchil8701.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length125
Homology
[Close]
BLAST of Gchil8701.t1 vs. uniprot
Match: A0A2V3IIY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY6_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 2.320e-51
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 0 
Query:    2 DKNDDEMYRAMFDSSDKTMKIRDARTSDIVVTTRQRGQLFNIIQVFNGDGFYGKPFFEVCGALDYDLAETESGRLLARVEQIIKWPEPSSCTVHVAADINVPLVLLLIVSINHIAE 117
            DK+ +E+YR    SSD TM+IRDART DIV+TTRQRGQLF+I+QVFNGDGFYGKPF EVC ALDY + E E GRLLA VEQ+++W EPS C+VH+A  +N PL+LLLI SINH  E
Sbjct:   74 DKHGEELYRTAVSSSDNTMRIRDARTDDIVITTRQRGQLFSIVQVFNGDGFYGKPFIEVCAALDYKVTEAEGGRLLATVEQVVRWSEPSHCSVHIATGLNAPLLLLLIASINHTVE 189
[Close]
BLAST of Gchil8701.t1 vs. uniprot
Match: A0A2V3IMC6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC6_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 8.630e-25
Identity = 48/110 (43.64%), Postives = 77/110 (70.00%), Query Frame = 0 
Query:    8 MYRAMFDSSDKTMKIRDARTSDIVVTTRQRGQLFNIIQVFNGDGFYGKPFFEVCGALDYDLAETESGRLLARVEQIIKWPEPSSCTVHVAADINVPLVLLLIVSINHIAE 117
            +Y+A+ D +   ++I DA++  +++TTRQ+G LF I QVF GD    +P+ EVC ALDY+L E E+GR+LA V++++++ E + C V V   +N P++LLLI +IN + E
Sbjct:   49 LYKAVIDITLNVVQIVDAKSEQVLLTTRQKGHLFPITQVFTGDNTAVEPYVEVCAALDYELCERETGRVLAVVDRVVRYAERAHCNVCVDTGLNAPVLLLLISTINDVVE 158
The following BLAST results are available for this feature:
BLAST of Gchil8701.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIY6_9FLOR2.320e-5168.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC6_9FLOR8.630e-2543.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:1352731..1353105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8701.t1Gchil8701.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 1352731..1353105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8701.t1 ID=Gchil8701.t1|Name=Gchil8701.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=125bp
MDKNDDEMYRAMFDSSDKTMKIRDARTSDIVVTTRQRGQLFNIIQVFNGD
GFYGKPFFEVCGALDYDLAETESGRLLARVEQIIKWPEPSSCTVHVAADI
NVPLVLLLIVSINHIAESSATASP*
back to top