Gchil8622.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8622.t1
Unique Name	Gchil8622.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	335

Homology

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BLAST of Gchil8622.t1 vs. uniprot
Match: A0A2V3J3A9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A9_9FLOR)

HSP 1 Score: 231 bits (589), Expect = 2.790e-71
Identity = 138/221 (62.44%), Postives = 159/221 (71.95%), Query Frame = 0

Query:   37 MGSPISATTPLVNTSLSTAPDIKPMLAPTIATTKSSRSHYTRAPVVKPSPAEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALAMEQLHLNDADRIRRGQLSVFERRVVRTVTNRGAAVRSRMRQRKQVAQLKQELRLRDTRCRQLENVIKTLCAKYALPMPLAF-----------PLQPPLSPSVQQPHRPSPY-LVPHVPRRNQTESETESIHTTE 245
            MGSPIS    L+        + K  +AP +   +S+RS Y+RAP+ KP+PAEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALA EQLH +D  RIRRGQLSVFERRVVRTVTNRGAAVRSRMRQR+QVAQLK ELRLRD R RQLE V++ LCAKYA+P+PLA            PL+     +  QP   SP  L    P++   ESETES+H+ E
Sbjct:    1 MGSPISNGPSLLPV------EHKTPIAPPVTKPRSTRSSYSRAPIAKPTPAEEELVRKIHRKVGGPSKLSTYDDPAKVRHVVIEALATEQLHADDTARIRRGQLSVFERRVVRTVTNRGAAVRSRMRQRRQVAQLKHELRLRDVRVRQLEGVVRVLCAKYAVPLPLAILSEQQQIHHLQPLEAHAHQAQAQPILASPLSLSQTTPQKAHHESETESVHSGE 215

The following BLAST results are available for this feature:

BLAST of Gchil8622.t1 vs. uniprot

BLAST of Gchil8622.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3A9_9FLOR	2.790e-71	62.44	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..293
None	No IPR available	CDD	cd14686	bZIP	coord: 153..192 e-value: 1.56515E-5 score: 39.8361
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 145..195

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:636279..637283 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8622.t1	Gchil8622.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 636279..637283 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8622.t1 ID=Gchil8622.t1|Name=Gchil8622.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=335bp
MTASAHAPTALPFCAISPSQSLEDIHFNLAQEITRAMGSPISATTPLVNT
SLSTAPDIKPMLAPTIATTKSSRSHYTRAPVVKPSPAEEELVRKIHRKVG
GPSKLSTYDDPAKVRHVVIEALAMEQLHLNDADRIRRGQLSVFERRVVRT
VTNRGAAVRSRMRQRKQVAQLKQELRLRDTRCRQLENVIKTLCAKYALPM
PLAFPLQPPLSPSVQQPHRPSPYLVPHVPRRNQTESETESIHTTEHQAQA
QAQAQLQPQPQPQPQPQPQPQPQPQPQPQPQLQPHPQPPEPQPSALGSHN
AQTQPQPEQQPSFAVESELFGSFMDHMIPHSTWV*