Gchil7425.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7425.t1
Unique NameGchil7425.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length101
Homology
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A2V3J786_9FLOR (Signal recognition particle 9 kDa protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J786_9FLOR)

HSP 1 Score: 146 bits (368), Expect = 8.990e-44
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSKTNVDVEGTA 86
            MV+ITQW+EFAVSSERLCL+SP KTRFSFKYRA DGVFVVKVTDDRTCLQYKS QKSDLRKME LNMRLL LMTS+ TNVD E +A
Sbjct:    1 MVYITQWEEFAVSSERLCLSSPEKTRFSFKYRANDGVFVVKVTDDRTCLQYKSTQKSDLRKMEMLNMRLLGLMTSADTNVDAETSA 86          
BLAST of Gchil7425.t1 vs. uniprot
Match: R7QCS9_CHOCR (Signal recognition particle 9 kDa protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCS9_CHOCR)

HSP 1 Score: 132 bits (333), Expect = 1.890e-38
Identity = 67/98 (68.37%), Postives = 80/98 (81.63%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSKTNVDVEGTATATPSEQNAIDQ 98
            MV+I QWDEF+VSSERL L+SPLKTRFSFKYRA +G FV+KVTDD+TCLQYKSN KSD+RKME LNMRL+DLMT+ + +VD E  A     + NA+ Q
Sbjct:    1 MVYIAQWDEFSVSSERLFLSSPLKTRFSFKYRAAEGAFVLKVTDDKTCLQYKSNLKSDIRKMEALNMRLMDLMTTREPDVDAEEDA----KDGNAVSQ 94          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A1Y1I374_KLENI (Signal recognition particle SRP9/SRP14 subunit n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I374_KLENI)

HSP 1 Score: 83.6 bits (205), Expect = 7.200e-19
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSK 77
            MV+I  WDEFA  +E L  A PL+TR+  KYR ++G+ V+KVTDD+ CL++K++Q  D +KME LN     LMT  +
Sbjct:    1 MVYIESWDEFAEKAEMLFRAEPLRTRYCVKYRHREGLLVLKVTDDKVCLKFKTDQAQDAKKMEKLNTLFFTLMTKGE 77          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A2P6TBS7_CHLSO (Signal recognition particle 9 kDa n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TBS7_CHLSO)

HSP 1 Score: 81.3 bits (199), Expect = 6.010e-18
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    2 VFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSK 77
            ++I  W+ F      L  A+PLKTRF  KYR  DG  V+KVTDD TCLQYK++Q+SDLRK+E LN++++ LM + +
Sbjct:    1 MYIENWESFYQQVVALYKAAPLKTRFVTKYRHGDGKLVLKVTDDVTCLQYKTDQQSDLRKLEKLNLQMMALMATGE 76          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A1Y1W4F0_9FUNG (Signal recognition particle, SRP9/SRP14 subunit n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1W4F0_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 9.980e-18
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSKTNVDVE 83
            MV+I  WD F  + E L +ASPLKTR+  KYR  D   V+KVTD  TC++YK+   SD++KME LN  LL  M ++K N++ +
Sbjct:    1 MVYIDDWDTFKKAVEDLYMASPLKTRYLVKYRNVDTKLVLKVTDGPTCIKYKTEYASDIKKMEKLNRSLLKKMLNTKKNLETK 83          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A1Y2AV32_9FUNG (Signal recognition particle, SRP9/SRP14 subunit n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2AV32_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 1.380e-17
Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSKTNVDVE 83
            MV+I  WD F  + E L +ASPLKTR+  KYR  D   V+KVTD  TC++YK+   SD++K+E LN  LL  M ++K N++ +
Sbjct:    1 MVYIDDWDTFKKAVEELYMASPLKTRYLVKYRNVDTKLVLKVTDGPTCIKYKTEYASDIKKLEKLNRSLLKKMLNTKKNLEAK 83          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A2P6N7P7_9EUKA (Signal recognition particle 9 kDa protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N7P7_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 1.720e-17
Identity = 37/77 (48.05%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSK 77
            MV++T WDEF  +SE+L    P +TR+S KYR  DGV V+KVTD+R  L+Y+++Q  DL+K++ +N   L LM+  K
Sbjct:    1 MVYLTNWDEFFAASEKLYRERPDETRYSTKYRNIDGVLVIKVTDNRVALKYRTDQAKDLKKIDRMNDLFLSLMSQPK 77          
BLAST of Gchil7425.t1 vs. uniprot
Match: A0A8C4WVT4_EPTBU (Signal recognition particle 9 kDa protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WVT4_EPTBU)

HSP 1 Score: 79.3 bits (194), Expect = 2.020e-17
Identity = 37/78 (47.44%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSKT 78
            M ++  W+EF  + E+LCL SP K R   KYR  DG   +KVTDD  CLQYK++Q  D++KME    +L+ LM S +T
Sbjct:    1 MTYLRSWEEFVRAGEKLCLCSPKKVRVVLKYRHCDGFLGMKVTDDAVCLQYKTDQAQDVKKMEKFQGQLMRLMLSKET 78          
BLAST of Gchil7425.t1 vs. uniprot
Match: UPI00035A20EE (signal recognition particle 9 kDa protein n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A20EE)

HSP 1 Score: 77.4 bits (189), Expect = 9.880e-17
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSK 77
            M + T W+EF+ S+ERL L  P+K RF   YR  DG  +VK+TDD+ CLQY+S    D++K+E L   L+  M S +
Sbjct:    1 MTYFTSWEEFSKSAERLYLNDPMKCRFVTSYRHTDGKLMVKITDDKVCLQYRSEHAQDVKKLEKLTSHLMRHMASKE 77          
BLAST of Gchil7425.t1 vs. uniprot
Match: UPI001B88C7CA (signal recognition particle 9 kDa protein-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C7CA)

HSP 1 Score: 77.4 bits (189), Expect = 9.880e-17
Identity = 34/77 (44.16%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    1 MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQYKSNQKSDLRKMETLNMRLLDLMTSSK 77
            M ++T W+EFA ++E+L L  P + RF+ KYR  DG  V+K+TDDR CLQY++    D++K+E L  +L+  M S +
Sbjct:    1 MTYLTTWEEFAKAAEKLYLIDPTRCRFTIKYRHCDGKLVLKMTDDRVCLQYRTEHAQDVKKLEKLTSQLMRHMASKE 77          
The following BLAST results are available for this feature:
BLAST of Gchil7425.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J786_9FLOR8.990e-4484.88Signal recognition particle 9 kDa protein n=1 Tax=... [more]
R7QCS9_CHOCR1.890e-3868.37Signal recognition particle 9 kDa protein n=1 Tax=... [more]
A0A1Y1I374_KLENI7.200e-1949.35Signal recognition particle SRP9/SRP14 subunit n=1... [more]
A0A2P6TBS7_CHLSO6.010e-1851.32Signal recognition particle 9 kDa n=1 Tax=Chlorell... [more]
A0A1Y1W4F0_9FUNG9.980e-1848.19Signal recognition particle, SRP9/SRP14 subunit n=... [more]
A0A1Y2AV32_9FUNG1.380e-1746.99Signal recognition particle, SRP9/SRP14 subunit n=... [more]
A0A2P6N7P7_9EUKA1.720e-1748.05Signal recognition particle 9 kDa protein n=1 Tax=... [more]
A0A8C4WVT4_EPTBU2.020e-1747.44Signal recognition particle 9 kDa protein n=1 Tax=... [more]
UPI00035A20EE9.880e-1745.45signal recognition particle 9 kDa protein n=1 Tax=... [more]
UPI001B88C7CA9.880e-1744.16signal recognition particle 9 kDa protein-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039432SRP9 domainPFAMPF05486SRP9-21coord: 5..70
e-value: 2.6E-7
score: 30.9
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10Signal recognition particle alu RNA binding heterodimer, srp9/1coord: 2..84
e-value: 3.7E-27
score: 95.9
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 5..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100
NoneNo IPR availablePANTHERPTHR12834:SF12SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 1..93
IPR039914Signal recognition particle SRP9PANTHERPTHR12834SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1135081..1135558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7425.t1Gchil7425.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1135081..1135558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7425.t1 ID=Gchil7425.t1|Name=Gchil7425.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=101bp
MVFITQWDEFAVSSERLCLASPLKTRFSFKYRAQDGVFVVKVTDDRTCLQ
YKSNQKSDLRKMETLNMRLLDLMTSSKTNVDVEGTATATPSEQNAIDQKR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039432SRP9_dom
IPR009018Signal_recog_particle_SRP9/14
IPR039914SRP9