Gchil10340.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10340.t1
Unique NameGchil10340.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length560
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000031_piloncontigtig00000031_pilon:371444..373123 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10340Gchil10340Gracilaria chilensis NLEC103_M9 malegenetig00000031_pilon 371444..373123 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10340.t1.stop1Gchil10340.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000031_pilon 371444..371446 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10340.t1.CDS1Gchil10340.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000031_pilon 371444..373123 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10340.t1.exon1Gchil10340.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000031_pilon 371444..373123 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10340.t1.start1Gchil10340.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000031_pilon 373121..373123 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10340.t1Gchil10340.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000031_pilon 371444..373123 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10340.t1 ID=Gchil10340.t1|Name=Gchil10340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=560bp
MIVSNLEAPRLQSVTVRNFASFQKKRELYEKQVEENNREPGVDITPLSYE
ASIENYLLQIFLTAEWIKAADIKDITEEQLKSCIQTRASFNPDGNDLTRI
EYVIRKVQMDMNLKEAEDRVWNLHHRYITALESEGMKELPAEKPHISIQH
ILKRIKPSRLRNIMKNIVRWRKEERFERKDFGVFMRELAAQAKKLDVELE
RDGVPKSEDEKDSDSSHSSTIQADRKQGKGGKRKSHEKSRKRRRERTGEQ
GDSDKQGRKKKPNRDLPPCLNPECAEFLFIADCNNSTEEEKEKFRKEYYA
EKKKRREEATSGRHGKKKGKVNRVASERIDSHSSLFSALFCNGAVETVVL
ADQGSDVNLLPKSIFQGITEAAPVVKAEELVPSRVYSGISTGSPKQAEIE
CTERVSLDVQLRIRHGSKLLLRSLEWEIANADLDYVIIGRPVLQSIGCDN
KAIIAAACDKNNGEINIPDALETDAKNRRAQEKGTIASIMKSGMYHSTAA
EGDDGLEDTKVYIDLGEDDPQVLEDTLKTRVQEAKQNGMSAQGVQELADL
LHEFKSVFD*
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spliced messenger RNA

>Gchil10340.t1 ID=Gchil10340.t1|Name=Gchil10340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1680bp|location=Sequence derived from alignment at tig00000031_pilon:371444..373123- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATCGTGTCTAACCTTGAGGCTCCTCGCCTGCAAAGTGTAACAGTGCG
GAACTTTGCAAGCTTCCAGAAGAAAAGGGAGCTCTATGAAAAGCAGGTGG
AAGAAAACAATAGAGAGCCCGGTGTGGATATCACTCCATTATCGTACGAA
GCATCTATTGAAAACTATCTGTTACAGATTTTTCTCACTGCCGAATGGAT
CAAAGCCGCCGACATAAAAGACATCACGGAAGAGCAGCTCAAGAGTTGTA
TCCAGACCAGAGCGAGCTTTAACCCTGATGGAAACGATTTGACCCGCATC
GAATATGTTATTCGAAAAGTCCAGATGGACATGAACCTCAAGGAAGCAGA
AGACCGCGTGTGGAACTTACATCACCGGTATATAACTGCCCTTGAGTCGG
AAGGCATGAAAGAACTTCCAGCAGAAAAGCCACATATATCTATTCAACAT
ATACTTAAGCGTATTAAACCGTCTCGCCTCCGGAATATAATGAAAAACAT
AGTCCGCTGGCGCAAGGAAGAAAGATTTGAGAGAAAAGACTTCGGGGTAT
TCATGCGCGAACTTGCCGCTCAAGCCAAAAAGCTTGACGTGGAACTAGAA
CGCGATGGTGTACCAAAATCAGAGGACGAAAAGGATTCTGACTCTTCTCA
TTCCAGCACGATCCAAGCAGATCGCAAGCAGGGAAAAGGAGGAAAAAGGA
AAAGCCACGAAAAGTCGCGAAAGCGACGCCGCGAAAGAACCGGTGAACAA
GGGGATAGTGATAAGCAAGGAAGAAAAAAGAAACCAAATAGAGACTTGCC
TCCTTGTCTTAACCCCGAATGTGCTGAGTTCCTTTTTATCGCGGACTGCA
ACAATTCTACTGAGGAGGAGAAAGAAAAATTCCGCAAGGAGTATTATGCA
GAGAAGAAAAAACGACGGGAAGAGGCAACGTCCGGCAGACACGGGAAGAA
AAAAGGGAAAGTGAACCGTGTCGCGTCAGAAAGAATTGATTCCCATTCTT
CTCTCTTTAGCGCCCTGTTCTGTAACGGAGCTGTCGAAACAGTAGTTTTG
GCCGACCAGGGGTCAGATGTCAATTTACTGCCGAAAAGCATATTTCAGGG
CATTACAGAGGCCGCACCAGTGGTTAAGGCTGAAGAGCTGGTTCCCTCTC
GTGTCTACAGTGGGATATCCACAGGCTCTCCTAAGCAGGCAGAAATTGAA
TGCACGGAAAGAGTTTCTCTTGACGTGCAGCTACGCATACGACACGGATC
GAAACTTTTGTTGAGGTCTCTCGAATGGGAAATAGCAAATGCTGACCTTG
ACTACGTCATCATTGGACGCCCGGTGCTCCAATCGATCGGGTGTGACAAT
AAGGCTATCATAGCCGCAGCTTGTGACAAAAACAATGGAGAGATCAACAT
CCCGGACGCATTAGAGACCGATGCCAAAAACCGTCGTGCGCAAGAAAAAG
GCACGATTGCATCGATCATGAAAAGTGGTATGTATCACAGTACTGCCGCT
GAAGGAGACGACGGTCTCGAGGATACCAAGGTATATATCGACCTAGGAGA
GGACGATCCGCAGGTGCTGGAGGACACACTCAAAACGAGAGTCCAAGAAG
CCAAACAGAACGGAATGTCGGCACAAGGAGTGCAGGAGCTCGCCGATCTC
CTGCATGAATTCAAGTCGGTTTTCGATTGA
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protein sequence of Gchil10340.t1

>Gchil10340.t1 ID=Gchil10340.t1|Name=Gchil10340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=560bp
MIVSNLEAPRLQSVTVRNFASFQKKRELYEKQVEENNREPGVDITPLSYE
ASIENYLLQIFLTAEWIKAADIKDITEEQLKSCIQTRASFNPDGNDLTRI
EYVIRKVQMDMNLKEAEDRVWNLHHRYITALESEGMKELPAEKPHISIQH
ILKRIKPSRLRNIMKNIVRWRKEERFERKDFGVFMRELAAQAKKLDVELE
RDGVPKSEDEKDSDSSHSSTIQADRKQGKGGKRKSHEKSRKRRRERTGEQ
GDSDKQGRKKKPNRDLPPCLNPECAEFLFIADCNNSTEEEKEKFRKEYYA
EKKKRREEATSGRHGKKKGKVNRVASERIDSHSSLFSALFCNGAVETVVL
ADQGSDVNLLPKSIFQGITEAAPVVKAEELVPSRVYSGISTGSPKQAEIE
CTERVSLDVQLRIRHGSKLLLRSLEWEIANADLDYVIIGRPVLQSIGCDN
KAIIAAACDKNNGEINIPDALETDAKNRRAQEKGTIASIMKSGMYHSTAA
EGDDGLEDTKVYIDLGEDDPQVLEDTLKTRVQEAKQNGMSAQGVQELADL
LHEFKSVFD*
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mRNA from alignment at tig00000031_pilon:371444..373123-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10340.t1 ID=Gchil10340.t1|Name=Gchil10340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1680bp|location=Sequence derived from alignment at tig00000031_pilon:371444..373123- (Gracilaria chilensis NLEC103_M9 male)
ATGATCGTGTCTAACCTTGAGGCTCCTCGCCTGCAAAGTGTAACAGTGCG
GAACTTTGCAAGCTTCCAGAAGAAAAGGGAGCTCTATGAAAAGCAGGTGG
AAGAAAACAATAGAGAGCCCGGTGTGGATATCACTCCATTATCGTACGAA
GCATCTATTGAAAACTATCTGTTACAGATTTTTCTCACTGCCGAATGGAT
CAAAGCCGCCGACATAAAAGACATCACGGAAGAGCAGCTCAAGAGTTGTA
TCCAGACCAGAGCGAGCTTTAACCCTGATGGAAACGATTTGACCCGCATC
GAATATGTTATTCGAAAAGTCCAGATGGACATGAACCTCAAGGAAGCAGA
AGACCGCGTGTGGAACTTACATCACCGGTATATAACTGCCCTTGAGTCGG
AAGGCATGAAAGAACTTCCAGCAGAAAAGCCACATATATCTATTCAACAT
ATACTTAAGCGTATTAAACCGTCTCGCCTCCGGAATATAATGAAAAACAT
AGTCCGCTGGCGCAAGGAAGAAAGATTTGAGAGAAAAGACTTCGGGGTAT
TCATGCGCGAACTTGCCGCTCAAGCCAAAAAGCTTGACGTGGAACTAGAA
CGCGATGGTGTACCAAAATCAGAGGACGAAAAGGATTCTGACTCTTCTCA
TTCCAGCACGATCCAAGCAGATCGCAAGCAGGGAAAAGGAGGAAAAAGGA
AAAGCCACGAAAAGTCGCGAAAGCGACGCCGCGAAAGAACCGGTGAACAA
GGGGATAGTGATAAGCAAGGAAGAAAAAAGAAACCAAATAGAGACTTGCC
TCCTTGTCTTAACCCCGAATGTGCTGAGTTCCTTTTTATCGCGGACTGCA
ACAATTCTACTGAGGAGGAGAAAGAAAAATTCCGCAAGGAGTATTATGCA
GAGAAGAAAAAACGACGGGAAGAGGCAACGTCCGGCAGACACGGGAAGAA
AAAAGGGAAAGTGAACCGTGTCGCGTCAGAAAGAATTGATTCCCATTCTT
CTCTCTTTAGCGCCCTGTTCTGTAACGGAGCTGTCGAAACAGTAGTTTTG
GCCGACCAGGGGTCAGATGTCAATTTACTGCCGAAAAGCATATTTCAGGG
CATTACAGAGGCCGCACCAGTGGTTAAGGCTGAAGAGCTGGTTCCCTCTC
GTGTCTACAGTGGGATATCCACAGGCTCTCCTAAGCAGGCAGAAATTGAA
TGCACGGAAAGAGTTTCTCTTGACGTGCAGCTACGCATACGACACGGATC
GAAACTTTTGTTGAGGTCTCTCGAATGGGAAATAGCAAATGCTGACCTTG
ACTACGTCATCATTGGACGCCCGGTGCTCCAATCGATCGGGTGTGACAAT
AAGGCTATCATAGCCGCAGCTTGTGACAAAAACAATGGAGAGATCAACAT
CCCGGACGCATTAGAGACCGATGCCAAAAACCGTCGTGCGCAAGAAAAAG
GCACGATTGCATCGATCATGAAAAGTGGTATGTATCACAGTACTGCCGCT
GAAGGAGACGACGGTCTCGAGGATACCAAGGTATATATCGACCTAGGAGA
GGACGATCCGCAGGTGCTGGAGGACACACTCAAAACGAGAGTCCAAGAAG
CCAAACAGAACGGAATGTCGGCACAAGGAGTGCAGGAGCTCGCCGATCTC
CTGCATGAATTCAAGTCGGTTTTCGATTGA
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Coding sequence (CDS) from alignment at tig00000031_pilon:371444..373123-

>Gchil10340.t1 ID=Gchil10340.t1|Name=Gchil10340.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1680bp|location=Sequence derived from alignment at tig00000031_pilon:371444..373123- (Gracilaria chilensis NLEC103_M9 male)
ATGATCGTGTCTAACCTTGAGGCTCCTCGCCTGCAAAGTGTAACAGTGCG
GAACTTTGCAAGCTTCCAGAAGAAAAGGGAGCTCTATGAAAAGCAGGTGG
AAGAAAACAATAGAGAGCCCGGTGTGGATATCACTCCATTATCGTACGAA
GCATCTATTGAAAACTATCTGTTACAGATTTTTCTCACTGCCGAATGGAT
CAAAGCCGCCGACATAAAAGACATCACGGAAGAGCAGCTCAAGAGTTGTA
TCCAGACCAGAGCGAGCTTTAACCCTGATGGAAACGATTTGACCCGCATC
GAATATGTTATTCGAAAAGTCCAGATGGACATGAACCTCAAGGAAGCAGA
AGACCGCGTGTGGAACTTACATCACCGGTATATAACTGCCCTTGAGTCGG
AAGGCATGAAAGAACTTCCAGCAGAAAAGCCACATATATCTATTCAACAT
ATACTTAAGCGTATTAAACCGTCTCGCCTCCGGAATATAATGAAAAACAT
AGTCCGCTGGCGCAAGGAAGAAAGATTTGAGAGAAAAGACTTCGGGGTAT
TCATGCGCGAACTTGCCGCTCAAGCCAAAAAGCTTGACGTGGAACTAGAA
CGCGATGGTGTACCAAAATCAGAGGACGAAAAGGATTCTGACTCTTCTCA
TTCCAGCACGATCCAAGCAGATCGCAAGCAGGGAAAAGGAGGAAAAAGGA
AAAGCCACGAAAAGTCGCGAAAGCGACGCCGCGAAAGAACCGGTGAACAA
GGGGATAGTGATAAGCAAGGAAGAAAAAAGAAACCAAATAGAGACTTGCC
TCCTTGTCTTAACCCCGAATGTGCTGAGTTCCTTTTTATCGCGGACTGCA
ACAATTCTACTGAGGAGGAGAAAGAAAAATTCCGCAAGGAGTATTATGCA
GAGAAGAAAAAACGACGGGAAGAGGCAACGTCCGGCAGACACGGGAAGAA
AAAAGGGAAAGTGAACCGTGTCGCGTCAGAAAGAATTGATTCCCATTCTT
CTCTCTTTAGCGCCCTGTTCTGTAACGGAGCTGTCGAAACAGTAGTTTTG
GCCGACCAGGGGTCAGATGTCAATTTACTGCCGAAAAGCATATTTCAGGG
CATTACAGAGGCCGCACCAGTGGTTAAGGCTGAAGAGCTGGTTCCCTCTC
GTGTCTACAGTGGGATATCCACAGGCTCTCCTAAGCAGGCAGAAATTGAA
TGCACGGAAAGAGTTTCTCTTGACGTGCAGCTACGCATACGACACGGATC
GAAACTTTTGTTGAGGTCTCTCGAATGGGAAATAGCAAATGCTGACCTTG
ACTACGTCATCATTGGACGCCCGGTGCTCCAATCGATCGGGTGTGACAAT
AAGGCTATCATAGCCGCAGCTTGTGACAAAAACAATGGAGAGATCAACAT
CCCGGACGCATTAGAGACCGATGCCAAAAACCGTCGTGCGCAAGAAAAAG
GCACGATTGCATCGATCATGAAAAGTGGTATGTATCACAGTACTGCCGCT
GAAGGAGACGACGGTCTCGAGGATACCAAGGTATATATCGACCTAGGAGA
GGACGATCCGCAGGTGCTGGAGGACACACTCAAAACGAGAGTCCAAGAAG
CCAAACAGAACGGAATGTCGGCACAAGGAGTGCAGGAGCTCGCCGATCTC
CTGCATGAATTCAAGTCGGTTTTCGATTGA
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