Gchil7705.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7705.t1
Unique NameGchil7705.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length510
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:429984..431513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7705Gchil7705Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 429984..431513 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7705.t1.start1Gchil7705.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 429984..429986 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7705.t1.CDS1Gchil7705.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 429984..431513 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7705.t1.exon1Gchil7705.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 429984..431513 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7705.t1.stop1Gchil7705.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 431511..431513 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7705.t1Gchil7705.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 429984..431513 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7705.t1 ID=Gchil7705.t1|Name=Gchil7705.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=510bp
MAARHDKSASDTGSPETNTPSPRIPRTLSASDSNHSTPTRTMSNPNRHYT
SATPALGGSTGFRSAAHPGDVTNLAYEDRRIGARFRGQADPPQWPTYDAL
VGANPRTRHGSARLRYAPWFHPLAVRDEDLIQSYTDNSEMLSGDLPGVVT
LSWDWRNRIAIPVHHILRRRGESSAEAQAALVRIAYLRHHRAPFEVPIPP
EVEFDVHLYRTRGEMSYCDRLNGLETLAWRGTPIAGQEALCWARPILWAE
FRYQPRQSRSNFLQNFIRDERRWQARTGYFVPYQNTEIECIAPAHRRGRY
VSLPDWWSSLEACWGSFIELPPVFTYVGSSFLNDPQSGWWSVVVSEWAVR
TAAFIFAEAYDQYRLWYVPPRVRDAIRRLDMRIPLGGEANEEEMLGLLDF
VEGVQWDEVPLDNSQRIQPRRGSGPGLGRNTALAEDFVYFDPWEYHEISR
EEAEANRHAPREVPADHPRGYVDSSDYYRDYADGDPMVDNEPEDPGYAPM
EDDGSGEAG*
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spliced messenger RNA

>Gchil7705.t1 ID=Gchil7705.t1|Name=Gchil7705.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1530bp|location=Sequence derived from alignment at tig00025321_pilon:429984..431513+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
atggcagctcgtcatgataagagcgcgtccgacaccgggtctccggaaac
caacacaccttcaccaaggatcccacgcacgctctccgcatccgattcca
accacagcactccaacacgcaccatgtccaaccccaaccgtcattacaca
tccgcgactcccgcccttggcggttccaccggcttccggtccgcggccca
ccctggggatgttaccaacctcgcgtacgaagaccgccgtattggcgccc
gctttcgcggacaggcggacccaccgcagtggccgacctacgacgccctt
gtgggtgcgaatccgagaactcggcatggctccgcgagattgcggtatgc
gccttggtttcacccattggctgtccgcgacgaggatttgatccaatcct
acaccgataattcggagatgctctcgggcgacctgcccggcgtggtgacc
ctgtcctgggattggcgtaatcgtatcgccatcccggtacaccacatact
ccgccgacgtggtgaatcctctgcggaggctcaagccgcgcttgtgcgga
tcgcttatctcaggcaccatcgggcgcctttcgaggtcccgataccgcca
gaggtcgaattcgacgtccacctttaccgcactcgcggggaaatgtcgta
ctgtgaccgtcttaacggattggaaaccctcgcttggaggggcacaccga
tcgctgggcaagaagccctttgctgggcacgaccgattctttgggcagag
ttccgctaccaaccgcggcagtcgcgctcgaacttccttcagaacttcat
ccgcgatgagcggcgttggcaggcccggaccgggtacttcgtaccgtacc
agaacacggagattgagtgcatcgcgcctgctcaccgacgtggtcggtac
gtcagtctcccagactggtggtcctccttggaggcgtgctggggttcctt
cattgagctgcccccagtattcacctatgtagggtcgtcgttcttgaacg
atccccagtcggggtggtggtccgtcgtggtaagcgaatgggccgtccgc
actgcggcttttatcttcgctgaggcgtacgaccaataccgattgtggta
cgtgccaccgcgtgtgcgggatgcgatccgtcgtttggacatgcgcatcc
ccctcgggggcgaggcgaacgaagaagagatgctgggcctcctcgacttt
gtggagggggtccagtgggatgaggtcccgttggataactcccaacgcat
tcaaccgcgtcgcgggtctggccccggactcgggaggaataccgcgctag
cggaggatttcgtctacttcgacccctgggagtaccacgagatcagccga
gaggaagcggaagccaaccggcatgcgccgcgtgaagtcccggccgacca
cccgcgagggtatgtcgactcgagcgactattaccgcgactatgcggatg
gtgacccgatggtcgacaacgaaccggaggatcccggttacgctccgatg
gaggatgacgggtccggcgaggccggttag
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protein sequence of Gchil7705.t1

>Gchil7705.t1 ID=Gchil7705.t1|Name=Gchil7705.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=510bp
MAARHDKSASDTGSPETNTPSPRIPRTLSASDSNHSTPTRTMSNPNRHYT
SATPALGGSTGFRSAAHPGDVTNLAYEDRRIGARFRGQADPPQWPTYDAL
VGANPRTRHGSARLRYAPWFHPLAVRDEDLIQSYTDNSEMLSGDLPGVVT
LSWDWRNRIAIPVHHILRRRGESSAEAQAALVRIAYLRHHRAPFEVPIPP
EVEFDVHLYRTRGEMSYCDRLNGLETLAWRGTPIAGQEALCWARPILWAE
FRYQPRQSRSNFLQNFIRDERRWQARTGYFVPYQNTEIECIAPAHRRGRY
VSLPDWWSSLEACWGSFIELPPVFTYVGSSFLNDPQSGWWSVVVSEWAVR
TAAFIFAEAYDQYRLWYVPPRVRDAIRRLDMRIPLGGEANEEEMLGLLDF
VEGVQWDEVPLDNSQRIQPRRGSGPGLGRNTALAEDFVYFDPWEYHEISR
EEAEANRHAPREVPADHPRGYVDSSDYYRDYADGDPMVDNEPEDPGYAPM
EDDGSGEAG*
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mRNA from alignment at tig00025321_pilon:429984..431513+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7705.t1 ID=Gchil7705.t1|Name=Gchil7705.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1530bp|location=Sequence derived from alignment at tig00025321_pilon:429984..431513+ (Gracilaria chilensis NLEC103_M9 male)
atggcagctcgtcatgataagagcgcgtccgacaccgggtctccggaaac
caacacaccttcaccaaggatcccacgcacgctctccgcatccgattcca
accacagcactccaacacgcaccatgtccaaccccaaccgtcattacaca
tccgcgactcccgcccttggcggttccaccggcttccggtccgcggccca
ccctggggatgttaccaacctcgcgtacgaagaccgccgtattggcgccc
gctttcgcggacaggcggacccaccgcagtggccgacctacgacgccctt
gtgggtgcgaatccgagaactcggcatggctccgcgagattgcggtatgc
gccttggtttcacccattggctgtccgcgacgaggatttgatccaatcct
acaccgataattcggagatgctctcgggcgacctgcccggcgtggtgacc
ctgtcctgggattggcgtaatcgtatcgccatcccggtacaccacatact
ccgccgacgtggtgaatcctctgcggaggctcaagccgcgcttgtgcgga
tcgcttatctcaggcaccatcgggcgcctttcgaggtcccgataccgcca
gaggtcgaattcgacgtccacctttaccgcactcgcggggaaatgtcgta
ctgtgaccgtcttaacggattggaaaccctcgcttggaggggcacaccga
tcgctgggcaagaagccctttgctgggcacgaccgattctttgggcagag
ttccgctaccaaccgcggcagtcgcgctcgaacttccttcagaacttcat
ccgcgatgagcggcgttggcaggcccggaccgggtacttcgtaccgtacc
agaacacggagattgagtgcatcgcgcctgctcaccgacgtggtcggtac
gtcagtctcccagactggtggtcctccttggaggcgtgctggggttcctt
cattgagctgcccccagtattcacctatgtagggtcgtcgttcttgaacg
atccccagtcggggtggtggtccgtcgtggtaagcgaatgggccgtccgc
actgcggcttttatcttcgctgaggcgtacgaccaataccgattgtggta
cgtgccaccgcgtgtgcgggatgcgatccgtcgtttggacatgcgcatcc
ccctcgggggcgaggcgaacgaagaagagatgctgggcctcctcgacttt
gtggagggggtccagtgggatgaggtcccgttggataactcccaacgcat
tcaaccgcgtcgcgggtctggccccggactcgggaggaataccgcgctag
cggaggatttcgtctacttcgacccctgggagtaccacgagatcagccga
gaggaagcggaagccaaccggcatgcgccgcgtgaagtcccggccgacca
cccgcgagggtatgtcgactcgagcgactattaccgcgactatgcggatg
gtgacccgatggtcgacaacgaaccggaggatcccggttacgctccgatg
gaggatgacgggtccggcgaggccggttag
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Coding sequence (CDS) from alignment at tig00025321_pilon:429984..431513+

>Gchil7705.t1 ID=Gchil7705.t1|Name=Gchil7705.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1530bp|location=Sequence derived from alignment at tig00025321_pilon:429984..431513+ (Gracilaria chilensis NLEC103_M9 male)
atggcagctcgtcatgataagagcgcgtccgacaccgggtctccggaaac
caacacaccttcaccaaggatcccacgcacgctctccgcatccgattcca
accacagcactccaacacgcaccatgtccaaccccaaccgtcattacaca
tccgcgactcccgcccttggcggttccaccggcttccggtccgcggccca
ccctggggatgttaccaacctcgcgtacgaagaccgccgtattggcgccc
gctttcgcggacaggcggacccaccgcagtggccgacctacgacgccctt
gtgggtgcgaatccgagaactcggcatggctccgcgagattgcggtatgc
gccttggtttcacccattggctgtccgcgacgaggatttgatccaatcct
acaccgataattcggagatgctctcgggcgacctgcccggcgtggtgacc
ctgtcctgggattggcgtaatcgtatcgccatcccggtacaccacatact
ccgccgacgtggtgaatcctctgcggaggctcaagccgcgcttgtgcgga
tcgcttatctcaggcaccatcgggcgcctttcgaggtcccgataccgcca
gaggtcgaattcgacgtccacctttaccgcactcgcggggaaatgtcgta
ctgtgaccgtcttaacggattggaaaccctcgcttggaggggcacaccga
tcgctgggcaagaagccctttgctgggcacgaccgattctttgggcagag
ttccgctaccaaccgcggcagtcgcgctcgaacttccttcagaacttcat
ccgcgatgagcggcgttggcaggcccggaccgggtacttcgtaccgtacc
agaacacggagattgagtgcatcgcgcctgctcaccgacgtggtcggtac
gtcagtctcccagactggtggtcctccttggaggcgtgctggggttcctt
cattgagctgcccccagtattcacctatgtagggtcgtcgttcttgaacg
atccccagtcggggtggtggtccgtcgtggtaagcgaatgggccgtccgc
actgcggcttttatcttcgctgaggcgtacgaccaataccgattgtggta
cgtgccaccgcgtgtgcgggatgcgatccgtcgtttggacatgcgcatcc
ccctcgggggcgaggcgaacgaagaagagatgctgggcctcctcgacttt
gtggagggggtccagtgggatgaggtcccgttggataactcccaacgcat
tcaaccgcgtcgcgggtctggccccggactcgggaggaataccgcgctag
cggaggatttcgtctacttcgacccctgggagtaccacgagatcagccga
gaggaagcggaagccaaccggcatgcgccgcgtgaagtcccggccgacca
cccgcgagggtatgtcgactcgagcgactattaccgcgactatgcggatg
gtgacccgatggtcgacaacgaaccggaggatcccggttacgctccgatg
gaggatgacgggtccggcgaggccggttag
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