Gchil7742.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7742.t1
Unique NameGchil7742.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length302
Homology
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BLAST of Gchil7742.t1 vs. uniprot
Match: A0A2V3IMG1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG1_9FLOR)

HSP 1 Score: 172 bits (435), Expect = 2.370e-48
Identity = 190/296 (64.19%), Postives = 215/296 (72.64%), Query Frame = 0 
Query:    1 MQNTLVSLCAAGLWHEADALIDHLVTLSEQQLARALQETHGTPAWTSLHYAAICNPTPPTLAKLVAHGADLHARGNSGSTALHLAAWSNTEHAAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDSSDADGVTAAELADMEEALHVXXXXXXXXDDVRSDWTLTSTLCAAASNVRGWGDRLAASLVGRHSPAADPNASLPPSAPPSP--VLRAGDALLGAG-DRPVRRGELYAAVGAGVLLSILLPMARAG 293
            MQ+TLV LCAAG W E DALID LV+ SE++LA AL+ETHG P W+SLHYAAI  PTPPTL KLV  GA+L ARG+SGST LHLAAW+ +  AA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA +  D +G T  ELA  ++A +V        DD+ SDWT+  T+     NV+ W +R    L G   P      SLPPS PPSP  V         A  ++PVRR ELYAAVGAG+L+SIL P+AR G
Sbjct:    1 MQDTLVDLCAAGRWEEVDALIDQLVSFSEEELAAALRETHGKPQWSSLHYAAIAKPTPPTLRKLVKAGAELEARGSSGSTPLHLAAWNGSVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNDPDEEGTTPDELA-HDDAKNVFE------DDLHSDWTVGKTILRVM-NVQAWRER----LFGLGPPGGG---SLPPSPPPSPNSVSLPSPRFSSADCEKPVRRRELYAAVGAGILISILFPLARGG 281
The following BLAST results are available for this feature:
BLAST of Gchil7742.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG1_9FLOR2.370e-4864.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 77..106
e-value: 1.8E-4
score: 30.8
coord: 43..73
e-value: 550.0
score: 6.9
coord: 110..139
e-value: 4.7E-6
score: 36.1
coord: 143..173
e-value: 0.0056
score: 25.9
IPR002110Ankyrin repeatPFAMPF13606Ank_3coord: 144..168
e-value: 0.0033
score: 17.8
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 48..141
e-value: 1.3E-15
score: 57.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 110..142
score: 14.18518
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 77..109
score: 12.50245
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 143..175
score: 11.38063
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..109
e-value: 1.9E-17
score: 65.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 110..205
e-value: 3.7E-22
score: 80.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 44..188
NoneNo IPR availablePANTHERPTHR24125ANKYRIN REPEAT AND DEATH DOMAIN-CONTAINING PROTEINcoord: 45..127
coord: 77..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..301
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 110..141
score: 12.805931
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 143..169
score: 11.160984
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 77..109
score: 11.134453

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:869921..870826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7742.t1Gchil7742.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 869921..870826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7742.t1 ID=Gchil7742.t1|Name=Gchil7742.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=302bp
MQNTLVSLCAAGLWHEADALIDHLVTLSEQQLARALQETHGTPAWTSLHY
AAICNPTPPTLAKLVAHGADLHARGNSGSTALHLAAWSNTEHAAQLLLSH
GANVEASSKNGRTPLMFAARRGNCNMMHALVQHGADLHARDQRGRTALHF
AAQSGRADAMHALLRAGAEDSSDADGVTAAELADMEEALHVAHHEHHEHD
DVRSDWTLTSTLCAAASNVRGWGDRLAASLVGRHSPAADPNASLPPSAPP
SPVLRAGDALLGAGDRPVRRGELYAAVGAGVLLSILLPMARAGGGGGGAG
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf