Gchil7765.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7765.t1
Unique NameGchil7765.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:1303870..1304814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7765Gchil7765Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 1303870..1304814 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7765.t1.start1Gchil7765.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 1303870..1303872 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7765.t1.CDS1Gchil7765.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 1303870..1304814 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7765.t1.exon1Gchil7765.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 1303870..1304814 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7765.t1.stop1Gchil7765.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 1304812..1304814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7765.t1Gchil7765.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 1303870..1304814 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7765.t1 ID=Gchil7765.t1|Name=Gchil7765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=315bp
MNGYRLPPKDGRDGRDGRDGRNGKPGKPGKDGKPGKRGGAGGDGGDGGAG
SDGAPGGAGGDGGAGSGNASGGDGGDGGVGGQSAPGGDGGDGGSGFIGGE
GGDGGMGGSSFSSDGGTGGEGGEGGDGVVGGDAGDGGAGGHSAVGNGGDG
GDGGSGGEGIVGGTGGDGGGGGIGLGGVGGSGGEGGYGGGGALPGNGGNG
GNGGLGLFGGTGGNGGNAGQQLTIDEAVQVASDAFQPNEKNKMVKTTTNT
VQKRKVVNMKKKIVKSISKTVKRTNKKIVKKKRIVTKKVRQTQKVHTKKK
KKVTKKVTQVRNGV*
back to top

spliced messenger RNA

>Gchil7765.t1 ID=Gchil7765.t1|Name=Gchil7765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00025321_pilon:1303870..1304814+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATGGATACCGCTTACCGCCAAAGGACggaagggatgggagggatgg
aagggatggAAGAAATGGTAAGCCTGGAAAGCCTGGAAAGGACGGGAAGC
CCGGAAAGAGAGGCGGGGCTGGTGGCGATGGAGGTGATGGCGGGGCAGGT
AGTGATGGGGCACCTGGTGGAGCCGGCGGTGACGGAGGCGCTGGTAGTGG
AAATGCTTCTGGTGGGGATGGAGGCGATGGGGGTGTTGGAGGCCAGAGCG
CCCCGGGAGGGGACGGTGGAGATGGAGGCAGTGGTTTCATAGGCGGTGAG
GGAGGAGACGGTGGTATGGGCGGTTCTTCGTTCAGTTCTGATGGAGGGAC
CGGTGGGGAAGGAGGGGAAGGTGGAGATGGTGTGGTAGGAGGCGATGCTG
GAGACGGTGGTGCTGGAGGACATTCTGCGGTGGGCAACGGCGGTGATGGT
GGGGATGGTGGTTCTGGAGGCGAGGGGATTGTTGGAGGCACTGGTGGGGA
TGGGGGTGGGGGTGGGATTGGTCTCGGCGGTGTGGGCGGTTCTGGGGGTG
AGGGCGGTTATGGAGGAGGTGGGGCTTTGCCTGGAAACGGTGGAAACGGA
GGGAACGGAGGACTCGGATTATTTGGCGGCACCGGTGGAAATGGAGGTAA
TGCAGGACAACAGCTTACCATCGACGAGGCCGTGCAAGTTGCCAGTGATG
CGTTTCAGCCAAACGAAAAGAATAAGATGGTGAAGACTACGACAAATACA
GTTCAAAAACGAAAGGTTGTGAACATGAAAAAGAAGATCGTGAAGAGCAT
TTCTAAAACAGTGAAGAGGACGAATAAGAAGATTGTGAAGAAAAAAAGGA
TCGTGACCAAGAAAGTGAGACAGACGCAAAAGGTGCATACTAAGAAGAAA
AAGAAGGTGACCAAGAAGGTGACACAGGTGAGAAACGGCGTCTAG
back to top

protein sequence of Gchil7765.t1

>Gchil7765.t1 ID=Gchil7765.t1|Name=Gchil7765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MNGYRLPPKDGRDGRDGRDGRNGKPGKPGKDGKPGKRGGAGGDGGDGGAG
SDGAPGGAGGDGGAGSGNASGGDGGDGGVGGQSAPGGDGGDGGSGFIGGE
GGDGGMGGSSFSSDGGTGGEGGEGGDGVVGGDAGDGGAGGHSAVGNGGDG
GDGGSGGEGIVGGTGGDGGGGGIGLGGVGGSGGEGGYGGGGALPGNGGNG
GNGGLGLFGGTGGNGGNAGQQLTIDEAVQVASDAFQPNEKNKMVKTTTNT
VQKRKVVNMKKKIVKSISKTVKRTNKKIVKKKRIVTKKVRQTQKVHTKKK
KKVTKKVTQVRNGV*
back to top

mRNA from alignment at tig00025321_pilon:1303870..1304814+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7765.t1 ID=Gchil7765.t1|Name=Gchil7765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00025321_pilon:1303870..1304814+ (Gracilaria chilensis NLEC103_M9 male)
ATGAATGGATACCGCTTACCGCCAAAGGACggaagggatgggagggatgg
aagggatggAAGAAATGGTAAGCCTGGAAAGCCTGGAAAGGACGGGAAGC
CCGGAAAGAGAGGCGGGGCTGGTGGCGATGGAGGTGATGGCGGGGCAGGT
AGTGATGGGGCACCTGGTGGAGCCGGCGGTGACGGAGGCGCTGGTAGTGG
AAATGCTTCTGGTGGGGATGGAGGCGATGGGGGTGTTGGAGGCCAGAGCG
CCCCGGGAGGGGACGGTGGAGATGGAGGCAGTGGTTTCATAGGCGGTGAG
GGAGGAGACGGTGGTATGGGCGGTTCTTCGTTCAGTTCTGATGGAGGGAC
CGGTGGGGAAGGAGGGGAAGGTGGAGATGGTGTGGTAGGAGGCGATGCTG
GAGACGGTGGTGCTGGAGGACATTCTGCGGTGGGCAACGGCGGTGATGGT
GGGGATGGTGGTTCTGGAGGCGAGGGGATTGTTGGAGGCACTGGTGGGGA
TGGGGGTGGGGGTGGGATTGGTCTCGGCGGTGTGGGCGGTTCTGGGGGTG
AGGGCGGTTATGGAGGAGGTGGGGCTTTGCCTGGAAACGGTGGAAACGGA
GGGAACGGAGGACTCGGATTATTTGGCGGCACCGGTGGAAATGGAGGTAA
TGCAGGACAACAGCTTACCATCGACGAGGCCGTGCAAGTTGCCAGTGATG
CGTTTCAGCCAAACGAAAAGAATAAGATGGTGAAGACTACGACAAATACA
GTTCAAAAACGAAAGGTTGTGAACATGAAAAAGAAGATCGTGAAGAGCAT
TTCTAAAACAGTGAAGAGGACGAATAAGAAGATTGTGAAGAAAAAAAGGA
TCGTGACCAAGAAAGTGAGACAGACGCAAAAGGTGCATACTAAGAAGAAA
AAGAAGGTGACCAAGAAGGTGACACAGGTGAGAAACGGCGTCTAG
back to top

Coding sequence (CDS) from alignment at tig00025321_pilon:1303870..1304814+

>Gchil7765.t1 ID=Gchil7765.t1|Name=Gchil7765.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=945bp|location=Sequence derived from alignment at tig00025321_pilon:1303870..1304814+ (Gracilaria chilensis NLEC103_M9 male)
ATGAATGGATACCGCTTACCGCCAAAGGACggaagggatgggagggatgg
aagggatggAAGAAATGGTAAGCCTGGAAAGCCTGGAAAGGACGGGAAGC
CCGGAAAGAGAGGCGGGGCTGGTGGCGATGGAGGTGATGGCGGGGCAGGT
AGTGATGGGGCACCTGGTGGAGCCGGCGGTGACGGAGGCGCTGGTAGTGG
AAATGCTTCTGGTGGGGATGGAGGCGATGGGGGTGTTGGAGGCCAGAGCG
CCCCGGGAGGGGACGGTGGAGATGGAGGCAGTGGTTTCATAGGCGGTGAG
GGAGGAGACGGTGGTATGGGCGGTTCTTCGTTCAGTTCTGATGGAGGGAC
CGGTGGGGAAGGAGGGGAAGGTGGAGATGGTGTGGTAGGAGGCGATGCTG
GAGACGGTGGTGCTGGAGGACATTCTGCGGTGGGCAACGGCGGTGATGGT
GGGGATGGTGGTTCTGGAGGCGAGGGGATTGTTGGAGGCACTGGTGGGGA
TGGGGGTGGGGGTGGGATTGGTCTCGGCGGTGTGGGCGGTTCTGGGGGTG
AGGGCGGTTATGGAGGAGGTGGGGCTTTGCCTGGAAACGGTGGAAACGGA
GGGAACGGAGGACTCGGATTATTTGGCGGCACCGGTGGAAATGGAGGTAA
TGCAGGACAACAGCTTACCATCGACGAGGCCGTGCAAGTTGCCAGTGATG
CGTTTCAGCCAAACGAAAAGAATAAGATGGTGAAGACTACGACAAATACA
GTTCAAAAACGAAAGGTTGTGAACATGAAAAAGAAGATCGTGAAGAGCAT
TTCTAAAACAGTGAAGAGGACGAATAAGAAGATTGTGAAGAAAAAAAGGA
TCGTGACCAAGAAAGTGAGACAGACGCAAAAGGTGCATACTAAGAAGAAA
AAGAAGGTGACCAAGAAGGTGACACAGGTGAGAAACGGCGTCTAG
back to top