Gchil5905.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5905.t1
Unique Name	Gchil5905.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	560

Homology

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BLAST of Gchil5905.t1 vs. uniprot
Match: A0A2V3IYI0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYI0_9FLOR)

HSP 1 Score: 413 bits (1061), Expect = 2.900e-134
Identity = 283/624 (45.35%), Postives = 372/624 (59.62%), Query Frame = 0

Query:    1 MPLENENIQAQSSKSAKQRNTGGSEQDYKTPRTAFFSTTNQLNFSRTASPESPPLEISPVQELFVDDIEIPSSKNLFLSTPNSKDITKELTVVRKRQIGTEQKKSHA--STSFVDRYCSSPEEEVESVSEEESETFKFLKDDEVSTSSEKSLKFPSGLKNLFADAGTDSPK-RSTLKNRNPCGLAVDTDLFSPRLSSDALDESGRKSR--LSRNELS-EPKAMKTSSDSSTQSS----------------------------------------------------------LRRPIGSRRRTLINLSRLSQSEELSPRSTSRSKEEYNISNVKAEEKPKTSPGGSNSTETSCEQVKVISPLMTKGVIMRAQTHKTNVNGIRKAETGKIMSREELLGDRKTVFLRESPIPKSLNPAAFSEEDDVMTRRPSTLFQYSSSESDRGVPNSSIQK--EENDDGTFLT----DKASLGYIYQEVQSSSSSKFSENGSSSGLVNRLGSSFKKAKNVVARRSATDIPELNNTDMLIVGTIDEVVCKVCYVCRKKMGCRVFVKNTGKKIKVEAD-DREIGYYVRASLFVRTLGGEEPSCAINIRQSRADGMKTNFASLWDFYQRLEKGLSEL 553
            MP + E++++ SS  +       S+ DYKTP T+ F    + + S +   ES PLEISPVQ+L  DDI+IPS+ +        + + K+  VV +R+    ++ +    S S  +     P EE E+  E  SE F    +D+ S    KS++   GL+ LF          R++ K+R P     + ++FSPRLS+D LD   R SR  L R  L  EPKA KT+  ++T  S                                                          +RRP+GSRR+TLI+LS + +S           K  +    V+ E+  + SP  S S+ T    +KV+SP   KGVIMRA THKTNVNGIRKAETGKIMSR+ELL ++K++ L+E+PIPKSLNPAAFSEEDDVM+RRPSTLF +SSSESD GV +    K   + DDG+FL     DKAS  Y Y EV S SSSKFSENGSSSG+VNRLGSSFKKAKN VAR+S T++P++  TD+L+ GT+DE V ++CYVCRKK+ C+VFVKNTG+KIKVE D DR+ G Y+RA+L ++ +GG+  +CA+NIRQSR DGMKT FA LW+FYQ LEKGL EL
Sbjct:    1 MPPKREDMESSSSNLSSVVRLDESDGDYKTPSTSLFGGQGE-DGSDSEGRESGPLEISPVQQLLFDDIDIPSAIDSLKKRSKGEKVEKDAEVVYEREKRRPRRTNDRFESDSISNALGIIPIEE-ETAVEPHSEDFVQFSEDDESEEEAKSVRVIPGLQGLFXXXXXXXXXXRTSRKSRTPKAPDSELEMFSPRLSNDELDRHERTSRGPLPRLPLIYEPKAKKTAKRTTTDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLIRRPLGSRRKTLIDLS-VKESVIEDSNGDEEKKSRHRAPRVQEEKVSEKSPE-SRSSATIESDIKVVSP-PRKGVIMRANTHKTNVNGIRKAETGKIMSRDELLTEQKSMLLKENPIPKSLNPAAFSEEDDVMSRRPSTLFNFSSSESD-GVTSGQRGKLGSQTDDGSFLEGGLLDKASASYTYHEVHSGSSSKFSENGSSSGIVNRLGSSFKKAKNAVARKSVTELPDVGGTDLLLAGTVDEAVLRICYVCRKKLKCKVFVKNTGRKIKVECDEDRKAGRYLRATLVLKAVGGDNSACAVNIRQSRHDGMKTTFARLWEFYQELEKGLQEL 618

The following BLAST results are available for this feature:

BLAST of Gchil5905.t1 vs. uniprot

BLAST of Gchil5905.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IYI0_9FLOR	2.900e-134	45.35	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 240..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..390

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025225_pilon	contig	tig00025225_pilon:118264..119943 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5905.t1	Gchil5905.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025225_pilon 118264..119943 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5905.t1 ID=Gchil5905.t1|Name=Gchil5905.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=560bp
MPLENENIQAQSSKSAKQRNTGGSEQDYKTPRTAFFSTTNQLNFSRTASP
ESPPLEISPVQELFVDDIEIPSSKNLFLSTPNSKDITKELTVVRKRQIGT
EQKKSHASTSFVDRYCSSPEEEVESVSEEESETFKFLKDDEVSTSSEKSL
KFPSGLKNLFADAGTDSPKRSTLKNRNPCGLAVDTDLFSPRLSSDALDES
GRKSRLSRNELSEPKAMKTSSDSSTQSSLRRPIGSRRRTLINLSRLSQSE
ELSPRSTSRSKEEYNISNVKAEEKPKTSPGGSNSTETSCEQVKVISPLMT
KGVIMRAQTHKTNVNGIRKAETGKIMSREELLGDRKTVFLRESPIPKSLN
PAAFSEEDDVMTRRPSTLFQYSSSESDRGVPNSSIQKEENDDGTFLTDKA
SLGYIYQEVQSSSSSKFSENGSSSGLVNRLGSSFKKAKNVVARRSATDIP
ELNNTDMLIVGTIDEVVCKVCYVCRKKMGCRVFVKNTGKKIKVEADDREI
GYYVRASLFVRTLGGEEPSCAINIRQSRADGMKTNFASLWDFYQRLEKGL
SELETGNNR*