Gchil5915.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5915.t1
Unique NameGchil5915.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length158
Homology
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A2V3IPJ1_9FLOR (Transcription elongation factor 1 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPJ1_9FLOR)

HSP 1 Score: 153 bits (387), Expect = 3.180e-45
Identity = 70/87 (80.46%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAKLEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANRAAGAE 87
            MGKRKRATKPPPKKK  KLEKVFNCPFCGHE SVEC++ +SEN G +ECRLCGVRYSTT+GRLEE IDVYYKWIDACDAAN+   A+
Sbjct:    1 MGKRKRATKPPPKKKMPKLEKVFNCPFCGHENSVECEVLRSENLGKLECRLCGVRYSTTVGRLEEAIDVYYKWIDACDAANQGGAAD 87          
BLAST of Gchil5915.t1 vs. uniprot
Match: UPI001EB07A6B (transcription elongation factor 1 homolog n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB07A6B)

HSP 1 Score: 101 bits (252), Expect = 2.290e-25
Identity = 48/83 (57.83%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A+KPPPKKKA + L+ +FNCPFC HE+S E K+ +  NTG + C +C   Y TTI  L E IDVY  WIDAC+AAN+
Sbjct:    1 MGRRKKASKPPPKKKAIQPLDTLFNCPFCNHEKSCEVKLDRQRNTGVITCGVCLEDYQTTINYLSEAIDVYSDWIDACEAANQ 83          
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A7J7JW43_BUGNE (Transcription elongation factor 1 homolog n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JW43_BUGNE)

HSP 1 Score: 97.4 bits (241), Expect = 1.060e-23
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAAN 81
            MG+RK+A KPPPK+KA + L+  F CPFC HE+S E K+ K+ NTG + CR+C   + T+I  L E +DVY  WIDAC+ AN
Sbjct:    1 MGRRKKANKPPPKRKAIEALDTQFTCPFCNHEKSCEVKLEKARNTGVISCRVCSESFQTSINYLSEAVDVYADWIDACEQAN 82          
BLAST of Gchil5915.t1 vs. uniprot
Match: UPI000D727A70 (transcription elongation factor 1 homolog n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D727A70)

HSP 1 Score: 97.4 bits (241), Expect = 1.060e-23
Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A KPPPK+K  + LE +FNCPFC HE+S E K+ ++ NTG + C +C   + T+I  L E +DVY  WIDAC+AAN+
Sbjct:    1 MGRRKKANKPPPKRKIIEPLETMFNCPFCNHEKSCEVKLDRTRNTGMITCNVCLEDFQTSINYLSEPVDVYSDWIDACEAANQ 83          
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A0L8HT48_OCTBM (Transcription elongation factor 1 homolog n=2 Tax=Octopus TaxID=6643 RepID=A0A0L8HT48_OCTBM)

HSP 1 Score: 96.3 bits (238), Expect = 3.000e-23
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A KPPPK+KA + L+ +FNCPFC HE+S E K+ ++ NTG + C +C   + T+I  L E +DVY  WIDAC++AN+
Sbjct:    1 MGRRKKARKPPPKRKAIEPLDLIFNCPFCNHEKSCEVKMDRNRNTGIISCSVCLEDFQTSINYLSEPVDVYSDWIDACESANQ 83          
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A2C9JHB9_BIOGL (Transcription elongation factor 1 homolog n=3 Tax=Euthyneura TaxID=216307 RepID=A0A2C9JHB9_BIOGL)

HSP 1 Score: 95.5 bits (236), Expect = 6.010e-23
Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKA-AKLEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A KPPPK+KA   L+ +FNCPFC HE+S E K+ +  NTG + C +C   + T I  L E +DVY  WIDAC++AN+
Sbjct:    1 MGRRKKANKPPPKRKAIVPLDTLFNCPFCNHEKSCEVKLDRERNTGIITCNVCLEDFQTNINYLSEAVDVYSDWIDACESANQ 83          
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A8B8CDJ5_CRAVI (Transcription elongation factor 1 homolog n=3 Tax=Crassostrea TaxID=6564 RepID=A0A8B8CDJ5_CRAVI)

HSP 1 Score: 94.7 bits (234), Expect = 1.210e-22
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAAN 81
            MG+RK+A KPPPK+K  + L+ +FNCPFC HE+S E K+ +  NTG + C +C   Y T+I  L E IDVY  WIDAC+ AN
Sbjct:    1 MGRRKKANKPPPKRKIIQALDTMFNCPFCNHEKSCEVKMDRERNTGFITCTVCLEDYQTSINYLSEPIDVYSDWIDACETAN 82          
BLAST of Gchil5915.t1 vs. uniprot
Match: M2Y2D5_GALSU (Transcription elongation factor 1 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2D5_GALSU)

HSP 1 Score: 94.0 bits (232), Expect = 2.350e-22
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAKLEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAAN 81
            MGKRK   KP  K K   L+KVFNCPFCGHE++V+C ISKS+  GSV CR+C   Y+  +  L+E +DVY +WID    AN
Sbjct:    1 MGKRKSRKKPIQKPKKPTLDKVFNCPFCGHEKTVDCTISKSKGIGSVSCRVCQASYTAEVTHLDEAVDVYAEWIDKTVQAN 81          
BLAST of Gchil5915.t1 vs. uniprot
Match: UPI001B88B775 (transcription elongation factor 1 homolog n=2 Tax=Mollusca TaxID=6447 RepID=UPI001B88B775)

HSP 1 Score: 94.0 bits (232), Expect = 2.420e-22
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAAK-LEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A+KPPPK+K  + L+ +FNCPFC HE+S E K+ +  NTG + C +C   + T I  L E +DVY  WIDAC++AN+
Sbjct:    1 MGRRKKASKPPPKRKVIEPLDILFNCPFCNHEKSCEVKLDRQRNTGIITCNVCLEDFQTNINYLSEAVDVYSDWIDACESANQ 83          
BLAST of Gchil5915.t1 vs. uniprot
Match: A0A1S3J1P5_LINUN (Transcription elongation factor 1 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J1P5_LINUN)

HSP 1 Score: 93.2 bits (230), Expect = 4.850e-22
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    1 MGKRKRATKPPPKKKAA-KLEKVFNCPFCGHEESVECKISKSENTGSVECRLCGVRYSTTIGRLEEEIDVYYKWIDACDAANR 82
            MG+RK+A KPPPK+K   KL+ +FNCPFC HE+S E  + ++ N G + C +C   + TTI  L E +DVY  WIDAC+ AN+
Sbjct:    1 MGRRKKANKPPPKRKILEKLDTMFNCPFCNHEKSCEVNLDRARNVGVITCNVCLEDFQTTINYLSEAVDVYSDWIDACEQANQ 83          
The following BLAST results are available for this feature:
BLAST of Gchil5915.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPJ1_9FLOR3.180e-4580.46Transcription elongation factor 1 homolog n=1 Tax=... [more]
UPI001EB07A6B2.290e-2557.83transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A7J7JW43_BUGNE1.060e-2353.66Transcription elongation factor 1 homolog n=1 Tax=... [more]
UPI000D727A701.060e-2353.01transcription elongation factor 1 homolog n=1 Tax=... [more]
A0A0L8HT48_OCTBM3.000e-2351.81Transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A2C9JHB9_BIOGL6.010e-2351.81Transcription elongation factor 1 homolog n=3 Tax=... [more]
A0A8B8CDJ5_CRAVI1.210e-2253.66Transcription elongation factor 1 homolog n=3 Tax=... [more]
M2Y2D5_GALSU2.350e-2254.32Transcription elongation factor 1 homolog n=1 Tax=... [more]
UPI001B88B7752.420e-2250.60transcription elongation factor 1 homolog n=2 Tax=... [more]
A0A1S3J1P5_LINUN4.850e-2250.60Transcription elongation factor 1 homolog n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038567Transcription elongation factor 1 superfamilyGENE3D2.20.25.190coord: 16..82
e-value: 1.4E-27
score: 97.7
IPR007808Transcription elongation factor 1PFAMPF05129Elf1coord: 2..78
e-value: 7.6E-30
score: 102.8
IPR007808Transcription elongation factor 1PANTHERPTHR20934UNCHARACTERIZEDcoord: 1..107
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:161163..161636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5915.t1Gchil5915.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025225_pilon 161163..161636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5915.t1 ID=Gchil5915.t1|Name=Gchil5915.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=158bp
MGKRKRATKPPPKKKAAKLEKVFNCPFCGHEESVECKISKSENTGSVECR
LCGVRYSTTIGRLEEEIDVYYKWIDACDAANRAAGAEGAGVEAVEAVEGA
GVGADEGAVKGRAVAVGSDDEGDDVEGVMESVGRRASGGREGVKVVVDDD
DVDDEAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038567T_Elf1_sf
IPR007808Elf1