Gchil5798.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil5798.t1
Unique Name	Gchil5798.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	140

Homology

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BLAST of Gchil5798.t1 vs. uniprot
Match: A0A2V3IFG4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFG4_9FLOR)

HSP 1 Score: 100 bits (250), Expect = 1.060e-22
Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 0

Query:   25 DPLPVRKGLILEGQSLKLADGET-KSSLLSQMQATGSTRNEKKDPNALD---LEEDELAANIGDLLSRQMGIKLNAKQVHKVREVIAGTFDERAEREEQVDDSEGSSVFDSNDTDTA 137
            DPL  R   IL GQS+K++D    K SL +    +   R     PN ++   +EEDELAANIGDLLS+ MG+KL++KQ+H VREVIAGTFDERAEREEQVD +EG  + D+ + +TA
Sbjct:  143 DPLLARDDQILRGQSIKVSDNTNLKHSLAAGTHGSVGIRG--LGPNNIESSGMEEDELAANIGDLLSKTMGVKLSSKQIHDVREVIAGTFDERAEREEQVDAAEG--ILDAENNETA 255

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BLAST of Gchil5798.t1 vs. uniprot
Match: R7QG87_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG87_CHOCR)

HSP 1 Score: 69.3 bits (168), Expect = 4.150e-11
Identity = 61/215 (28.37%), Postives = 88/215 (40.93%), Query Frame = 0

Query:    1 MSRGQEVEEEEKHQTRDGDDVEDADPLPVRKGLILEGQSLKLADGET-----------------------------------KSSLLSQMQATGSTRNEKKDPNAL-------------------DLE-----------------------------------------EDELAANIGDLLSRQMGIKLNAKQVHKVREVIAGTFDERAEREEQV 120
            M+RG+ VE+EE+     G D+E +DPLP +KGLIL+GQ++K    E                                    ++S LS  +  GS+   K +P  +                   DLE                                         EDELAANI D L+ ++G+ L+ K++H +RE+IAGT DERAERE++V
Sbjct:  122 MNRGKLVEQEERGHLDPGTDLEQSDPLPAQKGLILKGQAVKARASELSEDMDAAEVSDELENSEWQPPTRHISNPRRTPTPGRASTLSDERKMGSSLVTKSNPELIQNVAVHGQAVRASDFSSKDDLEDRQLSRDSFPKTPPSPQDENKKKGVLPKQKSPQSQDTQMEEEDELAANIADFLTTKLGVSLDFKEMHDIRELIAGTLDERAEREDEV 336

The following BLAST results are available for this feature:

BLAST of Gchil5798.t1 vs. uniprot

BLAST of Gchil5798.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IFG4_9FLOR	1.060e-22	53.85	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QG87_CHOCR	4.150e-11	28.37	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004449_pilon	contig	tig00004449_pilon:220679..221204 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil5798.t1	Gchil5798.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004449_pilon 220679..221204 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil5798.t1 ID=Gchil5798.t1|Name=Gchil5798.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=140bp
MSRGQEVEEEEKHQTRDGDDVEDADPLPVRKGLILEGQSLKLADGETKSS
LLSQMQATGSTRNEKKDPNALDLEEDELAANIGDLLSRQMGIKLNAKQVH
KVREVIAGTFDERAEREEQVDDSEGSSVFDSNDTDTADS*