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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 45157.CMS389CT |
Preferred name | FAM210B |
PFAMs | DUF1279 |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K20815 |
GOs | GO:0002682,GO:0002684,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010467,GO:0014070,GO:0016020,GO:0017196,GO:0018193,GO:0018206,GO:0019538,GO:0019867,GO:0031090,GO:0031224,GO:0031365,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0032355,GO:0032870,GO:0033993,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045646,GO:0045648,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051239,GO:0051240,GO:0051604,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071392,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0098588,GO:0098805,GO:1901564,GO:1901700,GO:1901701,GO:1903706,GO:1903708,GO:2000026 |
Evalue | 4.95e-30 |
EggNOG OGs | KOG4526@1|root,KOG4526@2759|Eukaryota |
Description | N-terminal peptidyl-methionine acetylation |
COG category | S |
BRITE | ko00000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10000.t1 ID=Gchil10000.t1|Name=Gchil10000.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=179bp MAFVSSYTLAGQRTTKAFNAAKCGYLGLARSRLLPPRRLQAVQFQTESPS FTPYTTTCMASSNSTKPDAKELAKLYGGSYLATSVGLSIISYLVLYAMVA VGVDVRTLMNTLGDFLATTPLGRPSVIDNISDTASTAALAYIAHKAMSPL RFPLTVAATPVVAKLFSKNGSGSEETSS* back to topspliced messenger RNA >Gchil10000.t1 ID=Gchil10000.t1|Name=Gchil10000.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=537bp|location=Sequence derived from alignment at tig00004442_pilon:217719..218255- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGTTCGTTAGCAGTTACACACTCGCCGGTCAAAGAACAACGAAAGC TTTCAATGCGGCGAAATGTGGTTACTTGGGGCTGGCACGAAGTCGACTGC TTCCTCCAAGGCGACTTCAGGCGGTTCAATTCCAGACAGAGTCTCCGAGC TTTACGCCTTACACCACTACATGCATGGCTAGCAGCAATTCCACCAAACC CGATGCAAAGGAACTGGCCAAGCTGTACGGTGGTTCTTATTTGGCCACCT CCGTAGGCTTATCCATAATATCGTATCTCGTCTTATACGCCATGGTGGCA GTTGGTGTAGATGTTAGAACGTTAATGAATACTTTAGGGGATTTCCTAGC CACTACTCCGCTCGGAAGACCTTCTGTCATTGACAACATATCGGACACAG CGAGCACGGCTGCGCTTGCATACATTGCCCACAAGGCCATGAGTCCGCTT CGGTTCCCGCTTACGGTCGCAGCAACACCAGTGGTAGCCAAGCTTTTCTC TAAGAACGGATCGGGATCAGAAGAAACATCTTCGTAA back to topprotein sequence of Gchil10000.t1 >Gchil10000.t1 ID=Gchil10000.t1|Name=Gchil10000.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=179bp
MAFVSSYTLAGQRTTKAFNAAKCGYLGLARSRLLPPRRLQAVQFQTESPS FTPYTTTCMASSNSTKPDAKELAKLYGGSYLATSVGLSIISYLVLYAMVA VGVDVRTLMNTLGDFLATTPLGRPSVIDNISDTASTAALAYIAHKAMSPL RFPLTVAATPVVAKLFSKNGSGSEETSS* back to topmRNA from alignment at tig00004442_pilon:217719..218255- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10000.t1 ID=Gchil10000.t1|Name=Gchil10000.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=537bp|location=Sequence derived from alignment at tig00004442_pilon:217719..218255- (Gracilaria chilensis NLEC103_M9 male) ATGGCGTTCGTTAGCAGTTACACACTCGCCGGTCAAAGAACAACGAAAGC
TTTCAATGCGGCGAAATGTGGTTACTTGGGGCTGGCACGAAGTCGACTGC
TTCCTCCAAGGCGACTTCAGGCGGTTCAATTCCAGACAGAGTCTCCGAGC
TTTACGCCTTACACCACTACATGCATGGCTAGCAGCAATTCCACCAAACC
CGATGCAAAGGAACTGGCCAAGCTGTACGGTGGTTCTTATTTGGCCACCT
CCGTAGGCTTATCCATAATATCGTATCTCGTCTTATACGCCATGGTGGCA
GTTGGTGTAGATGTTAGAACGTTAATGAATACTTTAGGGGATTTCCTAGC
CACTACTCCGCTCGGAAGACCTTCTGTCATTGACAACATATCGGACACAG
CGAGCACGGCTGCGCTTGCATACATTGCCCACAAGGCCATGAGTCCGCTT
CGGTTCCCGCTTACGGTCGCAGCAACACCAGTGGTAGCCAAGCTTTTCTC
TAAGAACGGATCGGGATCAGAAGAAACATCTTCGTAA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:217719..218255- >Gchil10000.t1 ID=Gchil10000.t1|Name=Gchil10000.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=537bp|location=Sequence derived from alignment at tig00004442_pilon:217719..218255- (Gracilaria chilensis NLEC103_M9 male) ATGGCGTTCGTTAGCAGTTACACACTCGCCGGTCAAAGAACAACGAAAGC TTTCAATGCGGCGAAATGTGGTTACTTGGGGCTGGCACGAAGTCGACTGC TTCCTCCAAGGCGACTTCAGGCGGTTCAATTCCAGACAGAGTCTCCGAGC TTTACGCCTTACACCACTACATGCATGGCTAGCAGCAATTCCACCAAACC CGATGCAAAGGAACTGGCCAAGCTGTACGGTGGTTCTTATTTGGCCACCT CCGTAGGCTTATCCATAATATCGTATCTCGTCTTATACGCCATGGTGGCA GTTGGTGTAGATGTTAGAACGTTAATGAATACTTTAGGGGATTTCCTAGC CACTACTCCGCTCGGAAGACCTTCTGTCATTGACAACATATCGGACACAG CGAGCACGGCTGCGCTTGCATACATTGCCCACAAGGCCATGAGTCCGCTT CGGTTCCCGCTTACGGTCGCAGCAACACCAGTGGTAGCCAAGCTTTTCTC TAAGAACGGATCGGGATCAGAAGAAACATCTTCGTAA back to top
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