Gchil7256.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7256.t1
Unique NameGchil7256.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length543
Homology
BLAST of Gchil7256.t1 vs. uniprot
Match: R7Q204_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q204_CHOCR)

HSP 1 Score: 322 bits (824), Expect = 1.630e-102
Identity = 198/354 (55.93%), Postives = 241/354 (68.08%), Query Frame = 0
Query:  190 MYLNDIFEQVPNADLD----------NIPDPTGSAAFLPPDPGWTPAPLE-EPDXXXXXXXXXXXXXXXXXTP-AGKKRKQELHRRHSKRYRDNLGELFASLEQLLPKVVPGCKLKTKSQIIANSVNAIKHLRTEVSTLEIQYVLSSPTNRTKWVEDTVSTALCFQNVVEPFMSLLLTMQKWKHSELWSRHEMNVPSDRSESGVAMSNPTESIQDLHLSSPKKFSLKLIDATSLQ-ASSSILRASYKQFSEAARDQVISVADDTIVGRVSSSLAPEVIDLRDLGSGGTFLRARVAEECGLVICLAVPILVRGHVYAVVLFFDDQPRANITQDRNVAQDLASSLGNCYGASSIHA 530
            MYLN +F+Q+                + P P   +  +PPD    P   E E D XXXXXXXXXXXXXX   P  GKKRKQELHRRHSKRYRDNLGELF +LEQLLPKVVPGCKLKTKSQIIANSV A+K LRTEVS LE+Q+VLSSP NRTKWVEDTV  A CFQ V EPFM LL+ +Q+WKHSELW R+E+N+  D ++SG  + NPT ++ DL   S KKF LKL    S+   ++S +  +Y+ FS+ +        DD+IVGR +S L+PE IDLRD  +   F R   A +CG   C A+P LVRGHV+A +LF+DDQ R +   D N+AQD+AS LGNCYGAS+  +
Sbjct:    1 MYLNHLFQQIDGDQTQPPPLQTPVTASHPLPAHLSPTVPPDSHPKPTNDEAEYDEXXXXXXXXXXXXXXKPQPIVGKKRKQELHRRHSKRYRDNLGELFQNLEQLLPKVVPGCKLKTKSQIIANSVQAVKRLRTEVSALEMQFVLSSPANRTKWVEDTVQAATCFQAVTEPFMRLLVGIQRWKHSELWCRYEVNLLPDGTDSGAPVINPTNTVHDLGPLSSKKFFLKLDRTVSVHDITASTVPEAYRMFSKISHMATFVNGDDSIVGRTASKLSPEWIDLRDPEACHGFKRGEAARQCGFTTCFALPFLVRGHVFASILFYDDQQRFDAGPDINIAQDIASCLGNCYGASAAQS 354          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A2V3J409_9FLOR (Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J409_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 9.490e-88
Identity = 146/221 (66.06%), Postives = 167/221 (75.57%), Query Frame = 0
Query:    3 SVANKRITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQPPHVAHC-DASEP----------SHPQSNHPVILRPTHQKRSAMYLNDIFEQVPNADLDNI-PDPT 211
            SVANKRI REL +LARG+AAPGIAAWARD+ SRLD+L AEI GA DTPY  GVFRLEL+IPREYPFKPPRVRFLTKIYHPN+D++GRICLDSLNMPP GAWKPSLN+ATVLT+IQALMSTPNADDGLM DIT EYRT PAVF+RKA++WT +YA P +   C DA+ P          SHP  +         Q+ +A  L  + EQ  + D D I P PT
Sbjct:    4 SVANKRIKRELDLLARGSAAPGIAAWARDEASRLDLLDAEICGAADTPYHSGVFRLELHIPREYPFKPPRVRFLTKIYHPNIDTEGRICLDSLNMPPNGAWKPSLNIATVLTTIQALMSTPNADDGLMADITDEYRTTPAVFRRKAEEWTNMYANPRNSHKCSDAANPPQGGQLDQNESHPSDS---------QQHAAKQLPSLHEQNADHDEDAIEPQPT 215          
BLAST of Gchil7256.t1 vs. uniprot
Match: R7Q2H8_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2H8_CHOCR)

HSP 1 Score: 244 bits (623), Expect = 2.820e-74
Identity = 113/153 (73.86%), Postives = 133/153 (86.93%), Query Frame = 0
Query:    4 VANKRITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYA 156
            +AN+R+ REL++L+RG AAPGIAAW RD+G+RLDVL AEI GA DTPYE G+FRLE+ IP EYP KPPRVRF+TKIYHPN+DS GRICLDSLNMPPKGAWKPSLNV+T+LT+IQALMS PN DDGLMV+IT E+R  P VF+ KA++ TR YA
Sbjct:    5 MANRRMKRELELLSRGGAAPGIAAWPRDEGNRLDVLDAEIRGASDTPYEGGIFRLEVVIPAEYPLKPPRVRFMTKIYHPNIDSQGRICLDSLNMPPKGAWKPSLNVSTLLTTIQALMSEPNGDDGLMVEITEEFRRRPEVFRNKARECTRKYA 157          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A7S4FAF6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAF6_CHRCT)

HSP 1 Score: 192 bits (487), Expect = 1.860e-54
Identity = 96/157 (61.15%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 MNSVANKRITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQ 157
            M  V + R+ +EL M+ R    PGI+AWA ++ S    L A I GA DTPY  G FRL++NIP  YPF+PP+V F+T IYHPN+DS GRICLD LNMPPKGAWKPSLNV+T+L+SIQ LMS PNADDGLM+DITHEY  N A F+RKA + T  +A+
Sbjct:    1 MTHVGHLRLKKELNMMYR-EPPPGISAWANEEDS--SELEAVIEGADDTPYAKGRFRLKINIPPRYPFEPPKVHFVTPIYHPNIDSAGRICLDILNMPPKGAWKPSLNVSTMLSSIQLLMSHPNADDGLMLDITHEYMHNFAQFERKAAEHTLKHAR 154          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A8D0WSR5_PIG (UBC core domain-containing protein n=5 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0WSR5_PIG)

HSP 1 Score: 192 bits (487), Expect = 3.270e-54
Identity = 91/150 (60.67%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQ 157
            R+ REL +LA     PGI  W   DG R+D L A+I G  +TPYE GVF+LE+NIP  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN+A VLTS+Q LMS PN DD LM DI+ EY+ N  VF R A+QWT  +A+
Sbjct:   40 RLKRELTLLAT-EPPPGITCW--QDGDRMDDLRAQILGGANTPYEKGVFKLEVNIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIAAVLTSVQQLMSEPNPDDPLMADISSEYKYNKPVFLRNARQWTEKHAR 186          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A3Q7T9J5_VULVU (ubiquitin-conjugating enzyme E2 T n=5 Tax=Caniformia TaxID=379584 RepID=A0A3Q7T9J5_VULVU)

HSP 1 Score: 190 bits (483), Expect = 5.250e-54
Identity = 99/188 (52.66%), Postives = 124/188 (65.96%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQPPHVAHCDASEPSHPQSNHPVILRPTHQKRSAMYLNDI 195
            R+ REL +LA     PGI  W   D  ++D L A+I GA DTPYE GVF+LE+ IP  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN+ATVLTSIQ LMS PN DD LM DI+ E++ N  VF + A+QWT  +A+    A  +      P++    +   T QKR A  L  I
Sbjct:    6 RLKRELNLLAT-EPPPGITCW--QDNDQMDDLRAQILGAADTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHARQKQEADEEEMPDDLPEAGDSGVCN-TAQKRKARPLGSI 189          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A226NS10_COLVI (UBC core domain-containing protein n=7 Tax=Galloanserae TaxID=1549675 RepID=A0A226NS10_COLVI)

HSP 1 Score: 189 bits (479), Expect = 6.220e-54
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYA 156
            R++REL ML+     PGI+ W    G+RLD L A+I GA DTPYE G+F LE+ +P  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN++T+LTSIQ LM+ PN DD LM DI+ EY+ N  +F   AK+WT  YA
Sbjct:    6 RLSRELSMLS-AEPPPGISCW--QSGARLDELRAQIIGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLLNAKEWTEKYA 151          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A7K9Y8U6_9GALL (UBE2T enzyme (Fragment) n=2 Tax=Galliformes TaxID=8976 RepID=A0A7K9Y8U6_9GALL)

HSP 1 Score: 188 bits (477), Expect = 9.760e-54
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYA 156
            R++REL ML+     PGI+ W    G+RLD L A+I GA DTPYE G+F LE+ +P  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN++T+LTSIQ LM+ PN DD LM DI+ EY+ N  +F   AK+WT  YA
Sbjct:    6 RLSRELTMLST-EPPPGISCW--QSGARLDELRAQIIGAADTPYEKGIFNLEIVVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNISTLLTSIQLLMAEPNPDDPLMADISSEYKYNKQLFLLNAKEWTEKYA 151          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A340X4J3_LIPVE (LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 T n=13 Tax=Odontoceti TaxID=9722 RepID=A0A340X4J3_LIPVE)

HSP 1 Score: 189 bits (479), Expect = 1.900e-53
Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQ 157
            R+ REL +LA     PGI  W   DG R++ L A+I G  DTPYE GVF+LE+NIP  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN+AT+LTS+Q LM+ PN DD LM DI+ E++ N  VF   A+QWT  +A+
Sbjct:    6 RLKRELSLLA-AEPPPGITCW--QDGDRMEDLRAQILGGADTPYERGVFKLEVNIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTSVQQLMAEPNPDDPLMADISSEFKYNKPVFLXXARQWTEKHAR 152          
BLAST of Gchil7256.t1 vs. uniprot
Match: A0A2K6S7G1_SAIBB (Ubiquitin conjugating enzyme E2 T n=2 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6S7G1_SAIBB)

HSP 1 Score: 189 bits (479), Expect = 1.960e-53
Identity = 90/150 (60.00%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    8 RITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTPYEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPKGAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQWTRLYAQ 157
            R+ REL MLA     PGI  W   D  ++DVL A+I G  +TPYE GVF+LE+ IP  YPF+PP++RFLT IYHPN+DS GRICLD L +PPKGAW+PSLN+ATVLTSIQ LMS PN DD LM DI+ E++ N  VF + A+QWT  +A+
Sbjct:    6 RLKRELHMLAT-EPPPGITCW--QDKDQMDVLRAQILGGANTPYEKGVFKLEVTIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPVFLKNARQWTEKHAR 152          
The following BLAST results are available for this feature:
BLAST of Gchil7256.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q204_CHOCR1.630e-10255.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J409_9FLOR9.490e-8866.06Ubiquitin-conjugating enzyme E2 T n=1 Tax=Gracilar... [more]
R7Q2H8_CHOCR2.820e-7473.86UBC core domain-containing protein n=1 Tax=Chondru... [more]
A0A7S4FAF6_CHRCT1.860e-5461.15Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A8D0WSR5_PIG3.270e-5460.67UBC core domain-containing protein n=5 Tax=Sus scr... [more]
A0A3Q7T9J5_VULVU5.250e-5452.66ubiquitin-conjugating enzyme E2 T n=5 Tax=Caniform... [more]
A0A226NS10_COLVI6.220e-5459.06UBC core domain-containing protein n=7 Tax=Galloan... [more]
A0A7K9Y8U6_9GALL9.760e-5459.06UBE2T enzyme (Fragment) n=2 Tax=Galliformes TaxID=... [more]
A0A340X4J3_LIPVE1.900e-5358.67LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme ... [more]
A0A2K6S7G1_SAIBB1.960e-5360.00Ubiquitin conjugating enzyme E2 T n=2 Tax=Platyrrh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..157
e-value: 1.6E-52
score: 190.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..184
NoneNo IPR availablePANTHERPTHR24068:SF278UBIQUITIN-CONJUGATING ENZYME E2 Tcoord: 7..174
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 7..174
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 8..151
e-value: 1.7E-39
score: 134.6
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 4..157
score: 50.030426
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..152
e-value: 7.79814E-52
score: 171.616
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 240..322
e-value: 1.0E-6
score: 30.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 254..320
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 399..531
e-value: 4.0E-6
score: 28.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..157
e-value: 4.4E-54
score: 184.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..159
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 80..95
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 256..309
score: 9.21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:884774..887153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7256.t1Gchil7256.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 884774..887153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7256.t1 ID=Gchil7256.t1|Name=Gchil7256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=543bp
MNSVANKRITRELQMLARGAAAPGIAAWARDDGSRLDVLHAEINGAPDTP
YEHGVFRLELNIPREYPFKPPRVRFLTKIYHPNVDSDGRICLDSLNMPPK
GAWKPSLNVATVLTSIQALMSTPNADDGLMVDITHEYRTNPAVFQRKAKQ
WTRLYAQPPHVAHCDASEPSHPQSNHPVILRPTHQKRSAMYLNDIFEQVP
NADLDNIPDPTGSAAFLPPDPGWTPAPLEEPDDDQDDEDEDDEDDQKRRT
PAGKKRKQELHRRHSKRYRDNLGELFASLEQLLPKVVPGCKLKTKSQIIA
NSVNAIKHLRTEVSTLEIQYVLSSPTNRTKWVEDTVSTALCFQNVVEPFM
SLLLTMQKWKHSELWSRHEMNVPSDRSESGVAMSNPTESIQDLHLSSPKK
FSLKLIDATSLQASSSILRASYKQFSEAARDQVISVADDTIVGRVSSSLA
PEVIDLRDLGSGGTFLRARVAEECGLVICLAVPILVRGHVYAVVLFFDDQ
PRANITQDRNVAQDLASSLGNCYGASSIHANRGEADNKTSSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR036638HLH_DNA-bd_sf
IPR029016GAF-like_dom_sf
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
IPR011598bHLH_dom