Gchil7307.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7307.t1
Unique NameGchil7307.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length107
Homology
BLAST of Gchil7307.t1 vs. uniprot
Match: L8GY61_ACACA (ER membrane protein complex subunit 6 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GY61_ACACA)

HSP 1 Score: 58.2 bits (139), Expect = 9.830e-9
Identity = 32/90 (35.56%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   16 AANQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTMLFSF 105
            A N + + F RI   +  G+AAGILG+ G  GF+FY   S ++++ +L +T ++  +Y  +P  + L+  A G+  +L+Y+LFWT+ + F
Sbjct:   21 AHNNRAIFFCRIIVASVAGSAAGILGVTGLGGFIFYAAASALVSLLVLHRTGYNTSKYFTSP--SALWTEAVGQG-LLSYVLFWTLFYGF 107          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A1D1Y718_9ARAE (ER membrane protein complex subunit 6 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y718_9ARAE)

HSP 1 Score: 56.2 bits (134), Expect = 5.260e-8
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITL-LFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N K + FIR       G+AAGILGL G+ GF+FY +VSL  +  +   KT   PG+Y +   + V   G FG  S+ +Y+LFWT+L+ 
Sbjct:   19 NTKTITFIRSSMSVIAGSAAGILGLTGYTGFIFYGVVSLFTSFIIWAMKTKGQPGKYFKGK-TDVWIDGVFG--SLFSYVLFWTLLYG 103          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A1D1XH52_9ARAE (ER membrane protein complex subunit 6 (Fragment) n=10 Tax=Eukaryota TaxID=2759 RepID=A0A1D1XH52_9ARAE)

HSP 1 Score: 55.8 bits (133), Expect = 8.100e-8
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLL-FKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N K + FIR    A  G+AAGILGL G+ GF+FYIL +++ +  +   KT  +PG Y R   S V   G FG   + +Y+LFWT+L+ 
Sbjct:   23 NAKTITFIRSSMSAITGSAAGILGLTGYSGFIFYILTAVLTSFLIWSIKTNANPGIYFRNG-SDVWTEGVFG--GLFSYVLFWTLLYG 107          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A1Y2BZ95_9FUNG (DUF786-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BZ95_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 7.880e-7
Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTM 101
            N  ILL+ R     + GAAAGILGL G  GF+F+   S++++I L  KT F P  Y      T+    A   NS+ +Y+LFWT+
Sbjct:  363 NMHILLYARSTLALSCGAAAGILGLTGTTGFIFFFAASVIMSIALFLKTGFKPDIYFPTGNGTLHVLTAEVLNSLFSYMLFWTL 446          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A6J0UVJ9_9SAUR (ER membrane protein complex subunit 6 n=14 Tax=Sauria TaxID=32561 RepID=A0A6J0UVJ9_9SAUR)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-6
Identity = 37/89 (41.57%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYL--RAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N  IL + R    A  GA AGILGL G  GF+FY L S+++++ L+FK      +Y   R P+ T    G  G   + TYILFWT L+ 
Sbjct:   22 NAAILDYCRTSVSALSGATAGILGLTGLHGFIFYFLASILLSVLLVFKAGRRWSKYFKSRRPLFTG---GLIG--GLFTYILFWTFLYG 105          
BLAST of Gchil7307.t1 vs. uniprot
Match: UPI0001CBB68A (ER membrane protein complex subunit 6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB68A)

HSP 1 Score: 52.4 bits (124), Expect = 1.670e-6
Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYL--RAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N+ ++ + R    A  GA AGILGL G  GF+FY++ SL ++I L+ K      +Y   R P+ T  F G      + TYILFWT L+ 
Sbjct:   22 NRSVMEYCRTSMSALSGATAGILGLTGLYGFIFYLITSLCLSIMLVVKAGSGWKKYFISRTPLLTNGFMG-----GLFTYILFWTFLYG 105          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A507FDM7_9FUNG (ER membrane protein complex subunit 6 n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDM7_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 3.680e-6
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTM 101
            N  I+L+ R    A  GAAAGILGL G  GF+F+   S +++  L+ +T F+P +Y       +        NS+ +Y+LFWT+
Sbjct:   23 NMYIILYARSTLAATAGAAAGILGLTGTTGFVFFFAASAVMSAALVLRTGFNPNKYFPQNRGWMQISTGEVVNSLFSYMLFWTL 106          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A0L0HML0_SPIPD (ER membrane protein complex subunit 6 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HML0_SPIPD)

HSP 1 Score: 50.8 bits (120), Expect = 7.290e-6
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGF-EGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTM 101
            N  +L + R       GAAAGILGL+G+  GFLFY+  SL++++ L  KT F+P RY   P   +L+      N+  +Y+LFWT+
Sbjct:   25 NAGVLQYARSSLAFISGAAAGILGLEGWLHGFLFYVASSLVLSLILWLKTGFNPKRYFPTP--DMLWVHEVAGNAF-SYLLFWTL 106          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A1S3JZD5_LINUN (ER membrane protein complex subunit 6 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JZD5_LINUN)

HSP 1 Score: 50.8 bits (120), Expect = 7.430e-6
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N  +L + R    A  G+ AGILGL G  GF+FY + + ++++ LL K      RY R+ I    FF       + TYILFWT L+ 
Sbjct:   29 NAAVLDYCRTSMSALSGSTAGILGLTGLFGFIFYFVTAFILSVMLLMKAGSQWHRYFRSRIG---FFTGGLLGGLFTYILFWTFLYG 112          
BLAST of Gchil7307.t1 vs. uniprot
Match: A0A7S0R7G1_9CHLO (ER membrane protein complex subunit 6 n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R7G1_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 7.580e-6
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   18 NQKILLFIRIFGYAAGGAAAGILGLQGFEGFLFYILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWTMLFS 104
            N  +L F+R F     G   GILG++G+ GFL +I V L+    +  K   +P +Y     S  LFF      ++LTYILFW + ++
Sbjct:   27 NMGVLAFMRNFMAVITGIVVGILGIEGWSGFLPHIAVQLLCAAAMTLKGAANPKKYFHTW-SNFLFFEVLSSTTLLTYILFWMIFYN 112          
The following BLAST results are available for this feature:
BLAST of Gchil7307.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
L8GY61_ACACA9.830e-935.56ER membrane protein complex subunit 6 n=1 Tax=Acan... [more]
A0A1D1Y718_9ARAE5.260e-842.05ER membrane protein complex subunit 6 (Fragment) n... [more]
A0A1D1XH52_9ARAE8.100e-843.18ER membrane protein complex subunit 6 (Fragment) n... [more]
A0A1Y2BZ95_9FUNG7.880e-741.67DUF786-domain-containing protein n=1 Tax=Rhizoclos... [more]
A0A6J0UVJ9_9SAUR1.190e-641.57ER membrane protein complex subunit 6 n=14 Tax=Sau... [more]
UPI0001CBB68A1.670e-639.33ER membrane protein complex subunit 6-like n=1 Tax... [more]
A0A507FDM7_9FUNG3.680e-636.90ER membrane protein complex subunit 6 n=1 Tax=Chyt... [more]
A0A0L0HML0_SPIPD7.290e-641.18ER membrane protein complex subunit 6 n=2 Tax=Spiz... [more]
A0A1S3JZD5_LINUN7.430e-637.93ER membrane protein complex subunit 6 n=1 Tax=Ling... [more]
A0A7S0R7G1_9CHLO7.580e-635.63ER membrane protein complex subunit 6 n=1 Tax=Chla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008ER membrane protein complex subunit 6-likePFAMPF07019EMC6coord: 28..103
e-value: 4.4E-12
score: 46.4
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 16..104
NoneNo IPR availablePANTHERPTHR20994:SF0ER MEMBRANE PROTEIN COMPLEX SUBUNIT 6coord: 16..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 47..68
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:1011370..1011752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7307.t1Gchil7307.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 1011370..1011752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7307.t1 ID=Gchil7307.t1|Name=Gchil7307.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=107bp
MTILSIQGVKLQNLYAANQKILLFIRIFGYAAGGAAAGILGLQGFEGFLF
YILVSLMITITLLFKTFFDPGRYLRAPISTVLFFGAFGRNSILTYILFWT
MLFSFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029008EMC6-like
IPR008504Emc6