Gchil7138.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7138.t1
Unique NameGchil7138.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length172
Homology
The following BLAST results are available for this feature:
BLAST of Gchil7138.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..134
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..154
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 103..122
NoneNo IPR availableTMHMMTMhelixcoord: 41..58
NoneNo IPR availableTMHMMTMhelixcoord: 132..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:330611..331126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7138.t1Gchil7138.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 330611..331126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7138.t1 ID=Gchil7138.t1|Name=Gchil7138.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=172bp
MNPSAAAVASAASPAPTVASPATPSAPVQSPSQAASRLKSALHLNALAAS
LLALAVLLSPNATAAALNLPTGALVLPLALVLATLAAAVFKTATNNANSR
RHVLVVAASNLVASVLIAFFLLLHTHNLHPSALRALIAVAFMAFAFAAAH
FHLLSASSHPYTHPTSEVLAI*
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