Gchil7127.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7127.t1
Unique NameGchil7127.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length544
Homology
BLAST of Gchil7127.t1 vs. uniprot
Match: A0A2V3IP58_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP58_9FLOR)

HSP 1 Score: 150 bits (380), Expect = 1.180e-35
Identity = 189/599 (31.55%), Postives = 261/599 (43.57%), Query Frame = 0
Query:   10 TIPSPPLL-HPIHKHYPSI---TAPSRRPRRYPRLT----------NPPLSSHNRFTTDSNSAFKLPPLSVPPYSSKPHVAVSATPFPLSSTPSVT-HSRPTQH-------PSLPPPFST----------PAYPAPTPCSASPPL------------EPQIHSVPYSHSLSS--PPRTFLHAPTRSSPVPQRSTY--------------PHADYSSPVTSSP-YSAPSVGSAPYSTSHPPPPHHLPVQAPSVPSSHPIAPPRVTPPXXXXAQPVAPHSVAASHAPPY--RTEAPLFPTS-LYNAQPKPVPQSYWSASGP-VTGGAQVRSLCNYNAQPVTSTAAHRSHVPNARATSTPAVQPVARQTPPAQSAPARRPTPVRSRSNKGFMPPPQPMEAVQHSYKRQRPSTVNCKSSCERVRISNITSESSSCTPPLSGAAVYRDHTGISRERS-----SGAVGTADGGGERRGQEEHTGFSSQGTAQAHPSY-DVRRMQLTRDNELQRLQTIAAGKIKVKMNLRGRTKIEQWLQRDDVVTKATALVVRMLRLDAAILSYNSSARKTALEKMSNEELRLLEALMIRLGNRNGHANWLILTD 537
            TIPSPP L  P++K YP++    AP RRPRRYPRL           NP  S+     T +   + LPPLS            SA P   +ST + T HS P  H       P LPPP S           P+ P P   ++ PP              P   + PY+ SLS+  PP     AP + +  P                   P+A  S+P+++ P Y +P     P +++ PPPP  LPV+  S        PP +  P     QP    +    + P Y     AP   T+ +Y A P    QS  +   P ++                                     Q  A+ +      P  RP     R     +   QP   +  +Y+ +   TVN         +S  T+ +S   P      V   H+  + +R      SGA    +G          T    +G+    PS+ + RR++L RD ELQR+QTIA  K+KVKMNLRGRTKIE WL + DVV+KA AL+VR   LD+ +LS ++ ARK  LEKM N++LRL+EALMIRLGN+NG+ +W +LT+
Sbjct:   16 TIPSPPPLPSPLNKRYPAVHHVIAPPRRPRRYPRLITFDNNGELQPNPVKSALKLGATSTK--YSLPPLS------------SAIPIANTSTNASTYHSAPVSHRHPPVAPPQLPPPASARKPFPLSSAAPSAPTPRTAASHPPHASTAPYTAPSLPHPSTVTQPYTPSLSNMPPPSQPTSAPAQYASTPXXXXXXXXXXXXXXXXAPPPNASTSTPLSAYPSYYSPXXXXXPTASTLPPPPRRLPVEQRS------SGPPSLRKPP----QPEPMSADERRYQPTYWNHQAAPENHTAQVYTASP----QSTIAPGTPSISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQSGAQVSCSISEKPPTRPLRSDERVQISNLTTQQPSPTMHAAYRER---TVN------GYGVSTATNGTS--LPVYQPRPVEPMHSPFAAQRDGAMYRSGASTMNEGTAAAYWHGSRTEVDQRGSGTHRPSHNEFRRVRLVRDTELQRVQTIARNKMKVKMNLRGRTKIEHWLLKGDVVSKAIALLVRAFGLDSMVLSSSAPARKACLEKMKNDDLRLMEALMIRLGNKNGYESWELLTE 575          
BLAST of Gchil7127.t1 vs. uniprot
Match: R7QGG5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG5_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 1.400e-16
Identity = 48/113 (42.48%), Postives = 75/113 (66.37%), Query Frame = 0
Query:  431 DVRRMQLTRDNELQRLQTIAAGKIKVKMNLRGRTKIEQWLQRDDVVTKATAL-VVRMLRLDAAILSYNSSARKTALEKMSNEELRLLEALMIRLGNRNGHANWLILTDGLNAQ 542
            D R++  T+D E+++++  A  ++ VKMNLRGR KI  WL   D +T  + + +V  + LD  ++S +S+ RK ALE+M N+ LR+LEALM+RLG ++G  NW  LT+  N +
Sbjct:  396 DNRKIIRTKDYEVRQMEAYAESRLHVKMNLRGRNKIWNWLSGGDRLTSYSVMFLVFTMDLDRKLISSSSTERKQALEEMENDSLRMLEALMMRLGTKDGCDNWHALTENFNLE 508          
The following BLAST results are available for this feature:
BLAST of Gchil7127.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IP58_9FLOR1.180e-3531.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGG5_CHOCR1.400e-1642.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:291387..293018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7127.t1Gchil7127.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 291387..293018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7127.t1 ID=Gchil7127.t1|Name=Gchil7127.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=544bp
MAPLRFTATTIPSPPLLHPIHKHYPSITAPSRRPRRYPRLTNPPLSSHNR
FTTDSNSAFKLPPLSVPPYSSKPHVAVSATPFPLSSTPSVTHSRPTQHPS
LPPPFSTPAYPAPTPCSASPPLEPQIHSVPYSHSLSSPPRTFLHAPTRSS
PVPQRSTYPHADYSSPVTSSPYSAPSVGSAPYSTSHPPPPHHLPVQAPSV
PSSHPIAPPRVTPPSLTPAQPVAPHSVAASHAPPYRTEAPLFPTSLYNAQ
PKPVPQSYWSASGPVTGGAQVRSLCNYNAQPVTSTAAHRSHVPNARATST
PAVQPVARQTPPAQSAPARRPTPVRSRSNKGFMPPPQPMEAVQHSYKRQR
PSTVNCKSSCERVRISNITSESSSCTPPLSGAAVYRDHTGISRERSSGAV
GTADGGGERRGQEEHTGFSSQGTAQAHPSYDVRRMQLTRDNELQRLQTIA
AGKIKVKMNLRGRTKIEQWLQRDDVVTKATALVVRMLRLDAAILSYNSSA
RKTALEKMSNEELRLLEALMIRLGNRNGHANWLILTDGLNAQR*
back to top