Gchil7170.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7170.t1
Unique NameGchil7170.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length332
Homology
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BLAST of Gchil7170.t1 vs. uniprot
Match: A0A2V3J457_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J457_9FLOR)

HSP 1 Score: 460 bits (1184), Expect = 5.380e-160
Identity = 233/328 (71.04%), Postives = 281/328 (85.67%), Query Frame = 0 
Query:    2 MTSSSDEEPAVQE-LTLSDALLKTTHELLRQYESGSLDEFRLAEGVAKLLRFAVLQSTDARSAVIELCEEISKRVEEKCIVEALSATALDIVAVGDSEDFGSVQSRIDNLVSQVSSMEGGLLESLASCLTADGDECNVMVLAERDMGVIEYGIDQAIAEGVGVDLTIVVACEQMQQDAENMAQRVAKMGVTSSIVQDADVANAVRHCDMAIVRAVGIQAEEKALCMHGSRLISTAAWLHRVPLMVVGGTHTITAEGSSALSAMCKVGRQPGATWTYEQCREDRGRHAISVVAPAYDSVELQRVHTVLTERGCFATDFIKVLAPRAGRV 328
            MTSSSDEE   ++ L+LSDALLKTT ELLRQYESGS DEF LAEGV KLLR AVLQSTDAR+AVIELCEEISKRV+EKCIVE+L++   DIVAVGDS++FG+VQ+RI+NLV+QV S+EGGLLESLASCLTADGD C++++LAE + GVIEYGIDQA+AEGV V++TIVVA E M++ AE M  R+ K+G+ +S V DA+V +A +  D+AIVRAVG+ AEE ALCMHGS L+   AW   +P+MVVGGTHTITAEGS+A++ M ++GR PG+TW Y++CREDRGR AIS+VAPAYD V LQ+VHTVLTERGCFATDF+KVLAPRAGRV
Sbjct:   38 MTSSSDEESVGEKGLSLSDALLKTTQELLRQYESGSFDEFSLAEGVVKLLRVAVLQSTDARAAVIELCEEISKRVQEKCIVESLASAIFDIVAVGDSDEFGTVQNRIENLVTQVCSLEGGLLESLASCLTADGDVCHILILAEEEAGVIEYGIDQAMAEGVNVEVTIVVAYEDMEESAEKMKLRLEKLGIHASTVLDANVESAAKESDVAIVRAVGMLAEEDALCMHGSALVCAGAWRAGIPVMVVGGTHTITAEGSAAMNVMTRMGRHPGSTWKYDECREDRGREAISIVAPAYDRVALQKVHTVLTERGCFATDFLKVLAPRAGRV 365
The following BLAST results are available for this feature:
BLAST of Gchil7170.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J457_9FLOR5.380e-16071.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 170..314
e-value: 2.8E-6
score: 26.8
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 124..317
e-value: 3.7E-17
score: 64.2
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 73..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:411582..412577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7170.t1Gchil7170.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 411582..412577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7170.t1 ID=Gchil7170.t1|Name=Gchil7170.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=332bp
MMTSSSDEEPAVQELTLSDALLKTTHELLRQYESGSLDEFRLAEGVAKLL
RFAVLQSTDARSAVIELCEEISKRVEEKCIVEALSATALDIVAVGDSEDF
GSVQSRIDNLVSQVSSMEGGLLESLASCLTADGDECNVMVLAERDMGVIE
YGIDQAIAEGVGVDLTIVVACEQMQQDAENMAQRVAKMGVTSSIVQDADV
ANAVRHCDMAIVRAVGIQAEEKALCMHGSRLISTAAWLHRVPLMVVGGTH
TITAEGSSALSAMCKVGRQPGATWTYEQCREDRGRHAISVVAPAYDSVEL
QRVHTVLTERGCFATDFIKVLAPRAGRVNDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
IPR042529IF_2B-like_C
IPR037171NagB/RpiA_transferase-like