Gchil7207.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7207.t1
Unique NameGchil7207.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length261
Homology
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A2V3IXE5_9FLOR (Nucleoporin-like protein amo1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE5_9FLOR)

HSP 1 Score: 286 bits (732), Expect = 1.860e-93
Identity = 158/267 (59.18%), Postives = 180/267 (67.42%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLT-NDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNELTGDISPEELRALAYSLAARGVSPQVVQKEGEMVSDHRAKVDALSRGGMQTHAPLGSNTIQMRDPFVGGDGFSSG-HIGHNNSTGMPMEHEQHMGNPFNAQPAGNPFGQAAXXXXXXXXXXXXXXXXXXXXXXXQPAPFXXXXGQSMPQNATQTTPP-----QNITPAQEQQFSAPQFGFANVPETAPPPRFY 260
            MVVC+Y++ GRCRYGDSCKFEH DP      + NDPF  +SSKPNR+ K   D+QPQWPLSVIGSRDDLS GNEL+GD+SPEELRALAYS+A RG+SPQV QKEG+MV++HRAKVDALSRGG+QTHAP+GSNTIQM+DPF    GFS G H   N  + M M+      N F +QP GNPFGQ A                       Q + F     QS P              QNITPAQEQQFSA QFGFANVPETAPPP+FY
Sbjct:   58 MVVCKYYQAGRCRYGDSCKFEHIDPPGRGGFSSNDPFSPSSSKPNRNSKHA-DAQPQWPLSVIGSRDDLSHGNELSGDVSPEELRALAYSMAPRGISPQVSQKEGQMVAEHRAKVDALSRGGLQTHAPVGSNTIQMQDPFAEDGGFSGGFHAPSNQGSQMAMDQAAQGRNQFGSQPVGNPFGQGAPFGHPP-----------------QGSQFQPTQQQSQPSXXXXXXXXXXXXSQNITPAQEQQFSAAQFGFANVPETAPPPQFY 306          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A8E2EB34_9PEZI (C3H1-type domain-containing protein n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2EB34_9PEZI)

HSP 1 Score: 70.9 bits (172), Expect = 2.660e-10
Identity = 65/210 (30.95%), Postives = 90/210 (42.86%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRS--------HKQQHDS-------------QPQWPLSVIG-SRDDLSKGNELTGDISPEELRALAYSLAARGVSPQVVQKEGEMVSDHRAKVD-ALSR-GGMQTHAPLGSNTIQMRDPFVGGDGFSSGHIGHNN----------STGMPMEHEQHMGNPFNAQPAG 176
            MVVC+YFR+G CR+GD CKFEH            P     ++P+RS         KQ   S             +P WPLS  G  RD   +  E   ++SPEE+R   Y   A G   Q VQ EG++    + ++D AL+   G   +   G+N    R  F    G ++G    +N           TG+     Q   NPF+  P+G
Sbjct:    1 MVVCKYFRDGNCRFGDRCKFEHIPSSAPSGNRFAPLQNDRNQPSRSDFGARGGTQKQWPYSLDPKTVKDDLTTDRPVWPLSAYGPGRDAPRQLIEGALEVSPEEMRLQFYHAKAAGQEAQAVQMEGQLARQAQHQIDNALNNLDGACQYIADGANVHPNRIDFAKLTGPTTGIFSIDNRSRPNFDPWAQTGINGSQPQ---NPFSTHPSG 207          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A899FWQ6_9ASCO (C3H1-type domain-containing protein n=1 Tax=Pneumocystis wakefieldiae TaxID=38082 RepID=A0A899FWQ6_9ASCO)

HSP 1 Score: 68.6 bits (166), Expect = 1.200e-9
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLT-NDPFVATSSKPNRSHKQQHDS--------QPQWPLSVIGSRDDLSKG--NELTG-DISPEELRALAYSLA 91
            MV+CR+F EGRCRYG SC+ EH++P + V    N P + +      +H    D+         P+W  +  G+     KG  N ++G DISPEELRA AY  A
Sbjct:    1 MVICRFFLEGRCRYGSSCRNEHQNPENGVFFRPNRPILESFKSSATNHIISEDAIREDLGKNHPEWLFTSYGT----GKGHPNLISGKDISPEELRAFAYECA 99          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A077WGR9_9FUNG (C3H1-type domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WGR9_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 4.530e-8
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNELTG-DISPEELRALAY-SLAARGVSPQVVQKEGEMVSDHRAKVDAL 117
            MV+C++F+EGRC  G+SC FEH +PR      N+  +  S +         D +P W LSV G   +  + N + G D+S EE R L + S+ A G + Q +Q   ++      +V+A+
Sbjct:    1 MVLCKFFQEGRCTRGNSCNFEHVNPRSQSDKYNESSIRLSLQ---------DERPSWRLSVFGPAKE--EPNLVVGTDLSCEEDRMLYHQSMRATGNATQYIQNHEKLQQQMDQQVNAI 108          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A5J4YNU7_PORPP (C3H1-type domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNU7_PORPP)

HSP 1 Score: 62.0 bits (149), Expect = 5.310e-8
Identity = 39/123 (31.71%), Postives = 59/123 (47.97%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNE--------------LTGDISPEELRALAYSLAARGVSPQ-VVQKEGEMVS 108
            MVVC+Y+++GRC+YGD+C+FEH  P        + F   ++           SQP +    +    D  +G                + GD+SP+ELRA AY+   +G + Q VVQ E   V+
Sbjct:    1 MVVCKYWQQGRCQYGDACRFEHVGPGGQAQ--GNAFGQPAAP---------QSQPMFGGGAMNGHADTYRGRGAVAARGVSRARRCLVKGDVSPDELRAEAYAAVLKGATAQQVVQHEASRVA 112          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A0W4ZRM5_PNEJ7 (C3H1-type domain-containing protein n=1 Tax=Pneumocystis jirovecii (strain RU7) TaxID=1408657 RepID=A0A0W4ZRM5_PNEJ7)

HSP 1 Score: 63.2 bits (152), Expect = 8.030e-8
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKG--NELTG-DISPEELRALAY 88
            MV+CR+F EG+CR+GD+C+ EH     +V    D      S       + H   PQWP +  G+     KG  N ++G DISPEELR +AY
Sbjct:    1 MVICRFFLEGKCRFGDNCRNEHVRAGKNVFFKADRSFQGESLIEDDLGKDH---PQWPFTCYGT----GKGHPNLISGKDISPEELRTVAY 84          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A6A6PQ34_9PEZI (C3H1-type domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PQ34_9PEZI)

HSP 1 Score: 62.8 bits (151), Expect = 1.360e-7
Identity = 43/121 (35.54%), Postives = 60/121 (49.59%), Query Frame = 0
Query:    3 VCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVAT----SSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNELTGDI--SPEELRALAYSLAARGVSPQVVQKEGEMVSDHRAKVDAL 117
            VC ++ EGRC++GD+C+F H  PRD    T  P  +     S +  +S     D +P WPLS  G   D  +   L G +  SPEELR   Y +AA G + Q    E E +S   A+   +
Sbjct:   24 VCNFYLEGRCKFGDNCRFYH-PPRDSN--TTRPGQSLPYHLSVEGIKSDLTPGDERPSWPLSAYGPGKDAPR-QLLEGALEQSPEELRVQYYLVAATGAAEQYQLTETEALSQANAQAQQI 140          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A6I9WMX4_9HYME (nuclear pore complex protein DDB_G0274915-like n=1 Tax=Pogonomyrmex barbatus TaxID=144034 RepID=A0A6I9WMX4_9HYME)

HSP 1 Score: 62.4 bits (150), Expect = 1.870e-7
Identity = 53/184 (28.80%), Postives = 83/184 (45.11%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNELTG--DISPEELRALAYSLAARGVSPQVVQKEGEMVSDHRAKVDALSRGGMQTHAPL----GSN--TIQM--------------------RDPFVGGDGFSSGHIGHNNST 156
            MV+C+Y+R+G CRYG  C++EH +   +    +D  +  + +   + +       QW LS  G    L +   + G  D+SPEE+R   Y     G+  Q      ++  D +AK +AL     +T   L    GSN  T QM                     +PF GG GF+S +I +NN++
Sbjct:    1 MVICKYYRQGNCRYGQYCQYEHINHFGNTKTDDDIVIMVAKEVLIAERGG-----QWLLSCFGP---LKERPCIPGMEDLSPEEVRWEMYHAQKNGMVEQAKLHFQQLCQDMKAKREALKNPTQETMTLLKKILGSNQKTSQMGLVNNTSTNTVFGNTTFGVQNNPF-GGGGFTSNNISNNNTS 175          
BLAST of Gchil7207.t1 vs. uniprot
Match: E2BF75_HARSA (Nucleoporin-like 2 n=3 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BF75_HARSA)

HSP 1 Score: 62.0 bits (149), Expect = 2.590e-7
Identity = 52/191 (27.23%), Postives = 82/191 (42.93%), Query Frame = 0
Query:    1 MVVCRYFREGRCRYGDSCKFEHRD----PRDDVHLTNDPFVATSSKPNRSHKQQHDSQPQWPLSVIGSRDDLSKGNELTG--DISPEELRALAYSLAARGVSPQVVQKEGEMVSDHRAKVDALSRGGMQTHAPLGSNTIQMRDPFVGGDGFSSGHIGHNNSTGMPMEHEQHMGNP----FNAQPAGNPFGQ 181
            MV+C+++R+G CRYG  C+FEH +    P+ D++  ++  V  + +   + +       QW LS       L +   + G  D+SPEE+R   Y     G+  Q      ++  D +AK DAL     +T        I M    +G      G +G NN           +  P     N+ PA N FG+
Sbjct:    1 MVICKFYRQGNCRYGQYCQFEHVNHFGGPKADLYNEDEIAVIVAKEVLLAERGG-----QWLLSCFAP---LKERPSIPGMEDLSPEEVRWDMYQAQKNGIVEQAKLHFQQLCQDMKAKRDALKNPNRET--------ITMLKKLLGSG--QKGGLGPNNDATTDKSSRSFLAAPQLGLANSTPANNVFGK 173          
BLAST of Gchil7207.t1 vs. uniprot
Match: A0A6H0Y129_9PEZI (C3H1-type domain-containing protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0Y129_9PEZI)

HSP 1 Score: 61.6 bits (148), Expect = 3.350e-7
Identity = 48/140 (34.29%), Postives = 65/140 (46.43%), Query Frame = 0
Query:    3 VCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPN-RSH----------KQQH-------------DSQPQWPLSVIG-SRDDLSKGNELTGDISPEELRALAYSLAARGVSPQVVQKE---GEMVSDHRAKV 114
            VC+++ EGRCR+GD CK+EH  P D     N  F A  S+P  RS+          KQ               D +P WPLS  G  RD   +  +   + SPEE+R L Y   A G + +  Q+E   GE V+    K+
Sbjct:    8 VCQFYLEGRCRFGDGCKYEH--PNDQAQNQN-RFAALGSQPRGRSNAFGANSTETTKQSMFAVTAEGIKLELTDERPIWPLSSYGPGRDAPRQLLDAEFEQSPEEMRLLHYMALANGNTQETAQRESSTGEAVNQAIQKI 144          
The following BLAST results are available for this feature:
BLAST of Gchil7207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXE5_9FLOR1.860e-9359.18Nucleoporin-like protein amo1 n=1 Tax=Gracilariops... [more]
A0A8E2EB34_9PEZI2.660e-1030.95C3H1-type domain-containing protein n=1 Tax=Lepido... [more]
A0A899FWQ6_9ASCO1.200e-939.81C3H1-type domain-containing protein n=1 Tax=Pneumo... [more]
A0A077WGR9_9FUNG4.530e-833.61C3H1-type domain-containing protein n=1 Tax=Lichth... [more]
A0A5J4YNU7_PORPP5.310e-831.71C3H1-type domain-containing protein n=1 Tax=Porphy... [more]
A0A0W4ZRM5_PNEJ78.030e-840.66C3H1-type domain-containing protein n=1 Tax=Pneumo... [more]
A0A6A6PQ34_9PEZI1.360e-735.54C3H1-type domain-containing protein n=1 Tax=Neohor... [more]
A0A6I9WMX4_9HYME1.870e-728.80nuclear pore complex protein DDB_G0274915-like n=1... [more]
E2BF75_HARSA2.590e-727.23Nucleoporin-like 2 n=3 Tax=Harpegnathos saltator T... [more]
A0A6H0Y129_9PEZI3.350e-734.29C3H1-type domain-containing protein n=1 Tax=Peltas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 1..24
e-value: 6.7E-5
score: 32.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 1..25
score: 15.32827
IPR041367E3 ligase, CCCH-type zinc fingerPFAMPF18044zf-CCCH_4coord: 3..22
e-value: 2.3E-8
score: 33.6
NoneNo IPR availableGENE3D4.10.1000.10coord: 1..56
e-value: 2.4E-7
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..246
NoneNo IPR availablePANTHERPTHR46527NUCLEOPORIN-LIKE PROTEIN 2coord: 1..26
coord: 52..259
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 2..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:533854..534636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7207.t1Gchil7207.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 533854..534636 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7207.t1 ID=Gchil7207.t1|Name=Gchil7207.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=261bp
MVVCRYFREGRCRYGDSCKFEHRDPRDDVHLTNDPFVATSSKPNRSHKQQ
HDSQPQWPLSVIGSRDDLSKGNELTGDISPEELRALAYSLAARGVSPQVV
QKEGEMVSDHRAKVDALSRGGMQTHAPLGSNTIQMRDPFVGGDGFSSGHI
GHNNSTGMPMEHEQHMGNPFNAQPAGNPFGQAAPFGQQQQQASPFQQQHQ
PATPFQQPAPFEQPAGQSMPQNATQTTPPQNITPAQEQQFSAPQFGFANV
PETAPPPRFY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR041367Znf-CCCH_4
IPR036855Znf_CCCH_sf