Gchil7268.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7268.t1
Unique NameGchil7268.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length270
Homology
BLAST of Gchil7268.t1 vs. uniprot
Match: A0A2V3IXL8_9FLOR (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL8_9FLOR)

HSP 1 Score: 497 bits (1279), Expect = 3.160e-160
Identity = 243/266 (91.35%), Postives = 259/266 (97.37%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M+ GLRNEDDLTNKLGDIVKNNNALR+LES GAVAHTIREQIDLVQYH+ATYMNNEIPGVVA+TVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNL+LHEVGVPR+IA+NLTYPE+VTTYNMAEMRKLV NGPNEYPGA  +EREDGR+  L+Y++DRSMV+LEVG+KVIRHI+DGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG
Sbjct:  233 MRGGLRNEDDLTNKLGDIVKNNNALRILESNGAVAHTIREQIDLVQYHVATYMNNEIPGVVASTVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPRTIAQNLTYPEVVTTYNMAEMRKLVENGPNEYPGAKMIEREDGRKTNLAYLADRSMVQLEVGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 498          
BLAST of Gchil7268.t1 vs. uniprot
Match: O09451_9FLOR (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Bonnemaisonia hamifera TaxID=31369 RepID=O09451_9FLOR)

HSP 1 Score: 468 bits (1203), Expect = 7.020e-150
Identity = 227/266 (85.34%), Postives = 252/266 (94.74%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M+ GLRNEDDLTNKLGDIVKNNN LR LE+TGAVAH IREQIDLVQYH+ATYMNNE+PG++ ATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVP SIA+NLTYPE+VT+YN+ EM+KLV NGP+EYPGA  +EREDG ++ L+Y+ +RS ++LE+G+KVIRHI+DGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQ+HQTRAEVQELMLVPHCIVSPQG
Sbjct:  159 MRGGLRNEDDLTNKLGDIVKNNNTLRNLEATGAVAHAIREQIDLVQYHVATYMNNELPGIMPATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPFSIARNLTYPEIVTSYNIDEMQKLVENGPDEYPGAKYIEREDGFKVNLAYVRNRSELQLELGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHQTRAEVQELMLVPHCIVSPQG 424          
BLAST of Gchil7268.t1 vs. uniprot
Match: Q9AXN1_9FLOR (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Botryocladia uvarioides TaxID=145666 RepID=Q9AXN1_9FLOR)

HSP 1 Score: 463 bits (1192), Expect = 2.080e-148
Identity = 227/266 (85.34%), Postives = 244/266 (91.73%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M  GLRNEDDLTNKLGDIVKNNN LR +E+ G VAH +REQ+DLVQYH+ATYMNNEIPGV  ATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNL LHEVGVP SIAKNLT+PE VT+YN AEMRKLV NGP EYPGA  +ER+DG+++ LSY++DR+   LE+GFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHCIVSPQG
Sbjct:  160 MHGGLRNEDDLTNKLGDIVKNNNMLRDMEAQGTVAHLLREQLDLVQYHVATYMNNEIPGVSQATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLLLHEVGVPYSIAKNLTFPETVTSYNYAEMRKLVENGPTEYPGAKYIERDDGQKVNLSYVADRTSTNLEIGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHGTRAEVQELMLVPHCIVSPQG 425          
BLAST of Gchil7268.t1 vs. uniprot
Match: R7QLG5_CHOCR (DNA-directed RNA polymerase subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG5_CHOCR)

HSP 1 Score: 409 bits (1052), Expect = 2.640e-128
Identity = 201/266 (75.56%), Postives = 230/266 (86.47%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M++G RNEDDLT+KLGDI++NNN L+ LESTGAVAH ++EQ  L+QYH+ TYMNNE  GV+ ATV+GG R IKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNL+LHEVGVP SIA NLTYPE+VT +N  ++ KLV+ GP+ +PG + +E ED  R+   Y  + + ++L VG KV RHI+DGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHCIVSPQG
Sbjct:  233 MRNGSRNEDDLTSKLGDILRNNNLLKTLESTGAVAHVLKEQEALLQYHVVTYMNNEFAGVIPATVKGGGRNIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPISIAMNLTYPEIVTPFNREDLTKLVMRGPHSHPGVNYIESED--RVFSLYFQNPADIQLTVGMKVFRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHLTRAEVQELMLVPHCIVSPQG 496          
BLAST of Gchil7268.t1 vs. uniprot
Match: A0A5J4YJT1_PORPP (DNA-directed RNA polymerase subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJT1_PORPP)

HSP 1 Score: 385 bits (990), Expect = 1.280e-119
Identity = 192/266 (72.18%), Postives = 223/266 (83.83%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M + +R EDDLT+KLGDIVKNNNALR LE  GA  H I EQIDL+QYH+ATYMNNE+PG+  A  +GG R IKSI QR KGKEGRVRGN+MGKRV+FSARTVIT DPNL L EVGVP++IA NLTYPE+VT +N  EM +LV+NGP+EYPGA  V R+DG ++ L+Y  +RS   L+ G KV+RHI+DGD V+FNRQPSLHKMSIMGHR+RV+PYSTFRLNLSVTSPYNADFDGDEMN+HVPQS  TRAE+ ELM+VP CIVSPQG
Sbjct:  238 MDATMRGEDDLTHKLGDIVKNNNALRHLELNGAPLHRINEQIDLLQYHVATYMNNEMPGLPRAEQKGG-RPIKSINQRLKGKEGRVRGNIMGKRVNFSARTVITADPNLMLDEVGVPKTIAMNLTYPEVVTRFNYEEMMRLVVNGPDEYPGAKYVVRDDGTQIDLAYYRNRSDFDLQYGMKVVRHIRDGDCVMFNRQPSLHKMSIMGHRVRVLPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSTLTRAEILELMMVPRCIVSPQG 502          
BLAST of Gchil7268.t1 vs. uniprot
Match: O04142_NEOYE (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Bangiaceae TaxID=31345 RepID=O04142_NEOYE)

HSP 1 Score: 382 bits (981), Expect = 9.570e-119
Identity = 187/266 (70.30%), Postives = 225/266 (84.59%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M +  R EDDLT+ L  IVKNN ALR LE  GA AH + EQI L+Q+H+ATYMNN++PG+  A  + G R +KSI QR KGKEGR+RGNLMGKRVDFSARTVITPDPNLRL +VGVP SIAKNLT+PE VT YN+ EM++LV NGP+EYP A  ++R+DG ++ L+Y+ +R+ V+LE+G+KV+RHI +GD+++FNRQPSLHKMSIMGHRI+VMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQ+H TRAEV ELM+VP CIVSPQG
Sbjct:  178 MDATQRGEDDLTHNLAVIVKNNTALRNLEGHGAPAHRLAEQIFLLQFHVATYMNNDLPGMPRAAQKSG-RPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITPDPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNLAYVRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQG 442          
BLAST of Gchil7268.t1 vs. uniprot
Match: M2XL82_GALSU (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XL82_GALSU)

HSP 1 Score: 364 bits (935), Expect = 2.090e-118
Identity = 180/266 (67.67%), Postives = 216/266 (81.20%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M +  R EDDLT+KLGDIVK NNAL+ LE  GA AH + EQ+ L+QYH+ATYMNNEIPG+  +  R G R +KSI QR KGKEGR+RGNLMGKRVDFSARTVITPDPN+RL EVGVP+SIA NLTYPE+VT  +   ++ LV NGPNE+PGA  + R+DG+R+ L Y+   + + LE+G+KV RH++DGD VLFNRQPSLHKMSIMGHR+R++PYSTFRLNLS TSPYNADFDGDEMNLHVPQ  + +AE+ ELM+VP  IVSPQ 
Sbjct:  234 MDATSRGEDDLTHKLGDIVKANNALKRLEREGAPAHALNEQLQLLQYHVATYMNNEIPGLPRSLQRSG-RPLKSISQRLKGKEGRIRGNLMGKRVDFSARTVITPDPNIRLDEVGVPKSIAMNLTYPEVVTPLSYGRLQALVANGPNEHPGAKYIVRDDGQRIDLRYVRRPADLHLEIGYKVERHLQDGDVVLFNRQPSLHKMSIMGHRVRILPYSTFRLNLSATSPYNADFDGDEMNLHVPQFLEGKAEILELMMVPKNIVSPQA 498          
BLAST of Gchil7268.t1 vs. uniprot
Match: A0A7S3EQ85_9RHOD (DNA-directed RNA polymerase subunit n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ85_9RHOD)

HSP 1 Score: 376 bits (966), Expect = 1.530e-116
Identity = 188/266 (70.68%), Postives = 217/266 (81.58%), Query Frame = 0
Query:    6 RNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATV---RGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGIS 268
            R EDDLT+ L DIVK NN LR  E  G     IR+Q++L+Q+ +A+Y+NNE+PG+  AT     GG R +KSI QR KGKEGRVRGNLMGKRVDFSARTVITPDPNL L EVGVPRSIA NLTYPE+VT +N+  MR+LV NGP+ YPGA  +ER+DG +M L YI++R  V LEVG+KVIRH+ DGD VLFNRQPSLHKMSIMGHR+RVMPYSTFRLNLSVTSPYNADFDGDEMN+HV ++HQTRAEV E+M VP CIVSPQG S
Sbjct:  240 RGEDDLTHALADIVKCNNLLRTYEEQGMAQQDIRKQVELLQFKVASYLNNELPGLPRATQGGKTGGKRPLKSISQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLWLDEVGVPRSIAMNLTYPEVVTPFNIERMRELVFNGPDTYPGAKFIERDDGFKMSLGYIANRGDVPLEVGYKVIRHLCDGDVVLFNRQPSLHKMSIMGHRVRVMPYSTFRLNLSVTSPYNADFDGDEMNMHVAETHQTRAEVHEIMKVPRCIVSPQGNS 505          
BLAST of Gchil7268.t1 vs. uniprot
Match: Q9AXN0_9RHOD (DNA-directed RNA polymerase subunit n=1 Tax=Glaucosphaera vacuolata TaxID=38265 RepID=Q9AXN0_9RHOD)

HSP 1 Score: 376 bits (966), Expect = 1.590e-116
Identity = 185/266 (69.55%), Postives = 221/266 (83.08%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M + +R EDDLT KLGDIV+NNNALR +E TGA AH + EQI ++Q HI T MNN++PG+  A  + G R IKSI QR KGKEGRVRGNLMGKRVDFS RTVI+PDPNLRL +VGVP++IA NLTYPE+VT +N+ +MR+LV+NGPNEYPGA  +ER DG ++ L+++ +RS + L  G KVIRH+ DGDYV+FNRQPSLHKMSIMGHR++VM YS+FRLNLS TSPYNADFDGDEMNLHVPQS Q RAEV +LM+VP CIVSPQG
Sbjct:  238 MDASMRGEDDLTYKLGDIVRNNNALREMERTGAPAHRLNEQIHVLQAHIITIMNNDLPGMPRAHQKSG-RPIKSISQRLKGKEGRVRGNLMGKRVDFSGRTVISPDPNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNGPNEYPGAKYIERLDGSKVNLAFVKNRSDIHLNNGEKVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRYSSFRLNLSCTSPYNADFDGDEMNLHVPQSPQARAEVMQLMMVPRCIVSPQG 502          
BLAST of Gchil7268.t1 vs. uniprot
Match: Q1L5X2_9EUKA (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Glaucocystis nostochinearum TaxID=38271 RepID=Q1L5X2_9EUKA)

HSP 1 Score: 351 bits (901), Expect = 6.950e-116
Identity = 178/266 (66.92%), Postives = 210/266 (78.95%), Query Frame = 0
Query:    1 MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIATYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYPGAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 266
            M S  R EDDLT+KL DIVK N  L+  E  GA AH I E   L+Q+H+ATY++NEIPG   A  R G R +KSI QR KGKEGR+RGNLMGKRVDFSARTVIT DPNL + +VG PRSIA NLTYPE+VT +NM  M +L+ NGPNE+PGA  + R+DG+R+ L YI   S + LE G++V RHI+DGDYVLFNRQPSLHKMSIMGHR++VMPYSTFRLNLSVT+PYNADFDGDEMN+HV Q+ +TRAEVQE+ LVP  I+SPQ 
Sbjct:  258 MDSTARGEDDLTHKLADIVKANMNLKRQEMNGAPAHIISEFQQLLQFHVATYVDNEIPGQPQACQRSG-RPLKSISQRLKGKEGRIRGNLMGKRVDFSARTVITADPNLGIDQVGCPRSIALNLTYPEIVTKFNMPRMYELIRNGPNEHPGARYIIRDDGQRLDLRYIKKASDLHLEPGYRVERHIQDGDYVLFNRQPSLHKMSIMGHRVKVMPYSTFRLNLSVTTPYNADFDGDEMNMHVAQTFETRAEVQEICLVPRQIISPQS 522          
The following BLAST results are available for this feature:
BLAST of Gchil7268.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXL8_9FLOR3.160e-16091.35DNA-directed RNA polymerase subunit n=1 Tax=Gracil... [more]
O09451_9FLOR7.020e-15085.34DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
Q9AXN1_9FLOR2.080e-14885.34DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
R7QLG5_CHOCR2.640e-12875.56DNA-directed RNA polymerase subunit n=1 Tax=Chondr... [more]
A0A5J4YJT1_PORPP1.280e-11972.18DNA-directed RNA polymerase subunit n=1 Tax=Porphy... [more]
O04142_NEOYE9.570e-11970.30DNA-directed RNA polymerase subunit (Fragment) n=2... [more]
M2XL82_GALSU2.090e-11867.67DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
A0A7S3EQ85_9RHOD1.530e-11670.68DNA-directed RNA polymerase subunit n=6 Tax=Rhodos... [more]
Q9AXN0_9RHOD1.590e-11669.55DNA-directed RNA polymerase subunit n=1 Tax=Glauco... [more]
Q1L5X2_9EUKA6.950e-11666.92DNA-directed RNA polymerase subunit (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 1..268
e-value: 2.2E-141
score: 485.7
NoneNo IPR availableGENE3D3.30.1490.180RNA polymerase iicoord: 125..184
e-value: 1.9E-79
score: 267.9
NoneNo IPR availableGENE3D2.40.40.20coord: 83..265
e-value: 1.9E-79
score: 267.9
NoneNo IPR availablePANTHERPTHR19376:SF55DNA-DIRECTED RNA POLYMERASE SUBUNITcoord: 3..265
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 2..265
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 3..90
e-value: 2.8E-26
score: 92.6
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 92..257
e-value: 6.7E-76
score: 254.1
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 3..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:915580..916471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7268.t1Gchil7268.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 915580..916471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7268.t1 ID=Gchil7268.t1|Name=Gchil7268.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=270bp
MQSGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHIA
TYMNNEIPGVVAATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSAR
TVITPDPNLRLHEVGVPRSIAKNLTYPELVTTYNMAEMRKLVLNGPNEYP
GAHSVEREDGRRMGLSYISDRSMVRLEVGFKVIRHIKDGDYVLFNRQPSL
HKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAE
VQELMLVPHCIVSPQGISL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR007080RNA_pol_Rpb1_1
IPR000722RNA_pol_asu
IPR045867DNA-dir_RpoC_beta_prime