Gchil7123.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7123.t1
Unique NameGchil7123.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length523
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:283939..285507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7123Gchil7123Gracilaria chilensis NLEC103_M9 malegenetig00004441_pilon 283939..285507 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7123.t1.stop1Gchil7123.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004441_pilon 283939..283941 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7123.t1.CDS1Gchil7123.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004441_pilon 283939..285507 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7123.t1.exon1Gchil7123.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004441_pilon 283939..285507 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7123.t1.start1Gchil7123.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004441_pilon 285505..285507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7123.t1Gchil7123.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004441_pilon 283939..285507 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7123.t1 ID=Gchil7123.t1|Name=Gchil7123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=523bp
MAYWKPSFAGLSAFFEWESKQGMPTGNNGESTASLQTQGGEQRDSEYIRS
SCITGEREELDAMIHDIWEDVFARVREYHPMIMEQLFLTTRSDTEKRLAV
NVAREVFKREMIIAFENISESRREQDGEEGSAAEEVLQFIASEKNDLQST
CDEYKEKYGEMTKMFDTAREEIENLRVKNSSLENCTRLLKAEMEELREAK
RDEEVKALRAQHDAEMAHLIAKQSVLQAQFLEKQLKEAEGSSKAVKTRME
ELRKVQNELRSVVADNSRQSRIHNRRSPNDSPEHRDPKPLGHLGMALARR
KSTIIGQKANEQVGPEMKNESSEVVSPTSTTDHFRTDASGDKITERRGLK
TLRPKFTGQQESEEHRAGVGHEERGMFRKRFRSLRRGAHGISEAEASREL
RSKLSGLTGFRRLLSLSRREGHQSGSARSSAVSAPQTLDALAKNLEVLQE
MVHSKQEEVNRLHRELRRAKQQSDAFEQRLRKEQHKRVEMKYCFSSNASP
STEVDGIGAPSVVDDGESGVHK*
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spliced messenger RNA

>Gchil7123.t1 ID=Gchil7123.t1|Name=Gchil7123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1569bp|location=Sequence derived from alignment at tig00004441_pilon:283939..285507- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTTATTGGAAACCTTCTTTCGCAGGGTTGTCGGCATTTTTTGAATG
GGAGTCCAAGCAGGGTATGCCTACAGGAAACAATGGTGAAAGTACTGCAT
CGCTTCAAACCCAGGGTGGGGAACAACGAGATAGCGAGTACATTAGGTCC
TCTTGCATTACCGGGGAAAGAGAAGAACTGGACGCCATGATTCATGACAT
CTGGGAAGACGTGTTCGCCCGAGTTCGAGAATACCATCCAATGATTATGG
AACAGCTCTTCTTGACAACCAGGTCCGACACAGAGAAAAGACTCGCAGTG
AACGTGGCACGGGAGGTGTTCAAACGAGAGATGATTATCGCATTTGAGAA
CATCAGTGAATCCCGTCGTGAACAGGACGGGGAAGAAGGGAGCGCAGCTG
AGGAAGTGTTACAGTTCATTGCAAGTGAGAAGAATGATTTGCAGAGTACC
TGTGATGAATACAAGGAAAAGTATGGAGAAATGACGAAGATGTTCGATAC
CGCTAGGGAAGAAATCGAGAATCTGCGAGTGAAGAACTCGTCCTTAGAGA
ACTGTACGAGGCTTTTGAAGGCCGAAATGGAAGAGTTGCGAGAAGCCAAG
AGGGATGAGGAAGTGAAAGCTCTCCGCGCTCAGCACGACGCGGAAATGGC
CCACCTCATAGCGAAGCAGTCCGTGCTACAAGCACAGTTTTTGGAGAAGC
AACTAAAAGAGGCTGAAGGCTCTTCAAAAGCAGTGAAAACCCGAATGGAA
GAGCTACGAAAAGTTCAGAACGAGCTTAGAAGCGTCGTCGCCGATAATTC
AAGGCAGTCTCGGATACATAATCGTAGATCTCCAAATGACTCGCCGGAGC
ACAGGGACCCTAAGCCGCTTGGTCATCTAGGGATGGCTCTTGCACGTCGA
AAGAGTACAATCATTGGACAAAAGGCAAATGAACAAGTCGGACCCGAAAT
GAAAAATGAGTCATCGGAAGTTGTGTCACCGACGTCAACTACCGATCATT
TCCGAACCGATGCGTCTGGTGACAAAATCACAGAGAGAAGGGGGCTGAAA
ACTTTGCGTCCCAAATTCACCGGGCAACAGGAAAGTGAAGAACATAGGGC
GGGTGTGGGACACGAAGAACGAGGAATGTTTCGGAAAAGATTTCGAAGTC
TTCGTCGCGGTGCACACGGAATATCAGAGGCTGAAGCTAGTCGTGAGCTG
AGAAGTAAGCTGTCAGGACTGACAGGGTTTAGGCGCTTGCTGTCGCTGAG
CAGACGCGAAGGTCATCAATCAGGTAGTGCGCGCAGTTCTGCGGTTTCCG
CACCGCAAACGTTAGATGCACTCGCGAAGAACCTTGAGGTCTTGCAAGAG
ATGGTCCATAGCAAACAGGAAGAGGTGAACCGTTTGCACAGGGAGTTGCG
ACGTGCTAAACAGCAATCCGACGCTTTTGAGCAACGTTTGAGGAAAGAAC
AGCACAAACGTGTAGAGATGAAGTACTGCTTTTCTTCAAACGCCAGCCCA
TCGACCGAAGTTGATGGAATCGGGGCGCCTTCGGTAGTAGATGACGGGGA
GAGCGGAGTACACAAATAA
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protein sequence of Gchil7123.t1

>Gchil7123.t1 ID=Gchil7123.t1|Name=Gchil7123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=523bp
MAYWKPSFAGLSAFFEWESKQGMPTGNNGESTASLQTQGGEQRDSEYIRS
SCITGEREELDAMIHDIWEDVFARVREYHPMIMEQLFLTTRSDTEKRLAV
NVAREVFKREMIIAFENISESRREQDGEEGSAAEEVLQFIASEKNDLQST
CDEYKEKYGEMTKMFDTAREEIENLRVKNSSLENCTRLLKAEMEELREAK
RDEEVKALRAQHDAEMAHLIAKQSVLQAQFLEKQLKEAEGSSKAVKTRME
ELRKVQNELRSVVADNSRQSRIHNRRSPNDSPEHRDPKPLGHLGMALARR
KSTIIGQKANEQVGPEMKNESSEVVSPTSTTDHFRTDASGDKITERRGLK
TLRPKFTGQQESEEHRAGVGHEERGMFRKRFRSLRRGAHGISEAEASREL
RSKLSGLTGFRRLLSLSRREGHQSGSARSSAVSAPQTLDALAKNLEVLQE
MVHSKQEEVNRLHRELRRAKQQSDAFEQRLRKEQHKRVEMKYCFSSNASP
STEVDGIGAPSVVDDGESGVHK*
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mRNA from alignment at tig00004441_pilon:283939..285507-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7123.t1 ID=Gchil7123.t1|Name=Gchil7123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1569bp|location=Sequence derived from alignment at tig00004441_pilon:283939..285507- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTTATTGGAAACCTTCTTTCGCAGGGTTGTCGGCATTTTTTGAATG
GGAGTCCAAGCAGGGTATGCCTACAGGAAACAATGGTGAAAGTACTGCAT
CGCTTCAAACCCAGGGTGGGGAACAACGAGATAGCGAGTACATTAGGTCC
TCTTGCATTACCGGGGAAAGAGAAGAACTGGACGCCATGATTCATGACAT
CTGGGAAGACGTGTTCGCCCGAGTTCGAGAATACCATCCAATGATTATGG
AACAGCTCTTCTTGACAACCAGGTCCGACACAGAGAAAAGACTCGCAGTG
AACGTGGCACGGGAGGTGTTCAAACGAGAGATGATTATCGCATTTGAGAA
CATCAGTGAATCCCGTCGTGAACAGGACGGGGAAGAAGGGAGCGCAGCTG
AGGAAGTGTTACAGTTCATTGCAAGTGAGAAGAATGATTTGCAGAGTACC
TGTGATGAATACAAGGAAAAGTATGGAGAAATGACGAAGATGTTCGATAC
CGCTAGGGAAGAAATCGAGAATCTGCGAGTGAAGAACTCGTCCTTAGAGA
ACTGTACGAGGCTTTTGAAGGCCGAAATGGAAGAGTTGCGAGAAGCCAAG
AGGGATGAGGAAGTGAAAGCTCTCCGCGCTCAGCACGACGCGGAAATGGC
CCACCTCATAGCGAAGCAGTCCGTGCTACAAGCACAGTTTTTGGAGAAGC
AACTAAAAGAGGCTGAAGGCTCTTCAAAAGCAGTGAAAACCCGAATGGAA
GAGCTACGAAAAGTTCAGAACGAGCTTAGAAGCGTCGTCGCCGATAATTC
AAGGCAGTCTCGGATACATAATCGTAGATCTCCAAATGACTCGCCGGAGC
ACAGGGACCCTAAGCCGCTTGGTCATCTAGGGATGGCTCTTGCACGTCGA
AAGAGTACAATCATTGGACAAAAGGCAAATGAACAAGTCGGACCCGAAAT
GAAAAATGAGTCATCGGAAGTTGTGTCACCGACGTCAACTACCGATCATT
TCCGAACCGATGCGTCTGGTGACAAAATCACAGAGAGAAGGGGGCTGAAA
ACTTTGCGTCCCAAATTCACCGGGCAACAGGAAAGTGAAGAACATAGGGC
GGGTGTGGGACACGAAGAACGAGGAATGTTTCGGAAAAGATTTCGAAGTC
TTCGTCGCGGTGCACACGGAATATCAGAGGCTGAAGCTAGTCGTGAGCTG
AGAAGTAAGCTGTCAGGACTGACAGGGTTTAGGCGCTTGCTGTCGCTGAG
CAGACGCGAAGGTCATCAATCAGGTAGTGCGCGCAGTTCTGCGGTTTCCG
CACCGCAAACGTTAGATGCACTCGCGAAGAACCTTGAGGTCTTGCAAGAG
ATGGTCCATAGCAAACAGGAAGAGGTGAACCGTTTGCACAGGGAGTTGCG
ACGTGCTAAACAGCAATCCGACGCTTTTGAGCAACGTTTGAGGAAAGAAC
AGCACAAACGTGTAGAGATGAAGTACTGCTTTTCTTCAAACGCCAGCCCA
TCGACCGAAGTTGATGGAATCGGGGCGCCTTCGGTAGTAGATGACGGGGA
GAGCGGAGTACACAAATAA
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Coding sequence (CDS) from alignment at tig00004441_pilon:283939..285507-

>Gchil7123.t1 ID=Gchil7123.t1|Name=Gchil7123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1569bp|location=Sequence derived from alignment at tig00004441_pilon:283939..285507- (Gracilaria chilensis NLEC103_M9 male)
ATGGCTTATTGGAAACCTTCTTTCGCAGGGTTGTCGGCATTTTTTGAATG
GGAGTCCAAGCAGGGTATGCCTACAGGAAACAATGGTGAAAGTACTGCAT
CGCTTCAAACCCAGGGTGGGGAACAACGAGATAGCGAGTACATTAGGTCC
TCTTGCATTACCGGGGAAAGAGAAGAACTGGACGCCATGATTCATGACAT
CTGGGAAGACGTGTTCGCCCGAGTTCGAGAATACCATCCAATGATTATGG
AACAGCTCTTCTTGACAACCAGGTCCGACACAGAGAAAAGACTCGCAGTG
AACGTGGCACGGGAGGTGTTCAAACGAGAGATGATTATCGCATTTGAGAA
CATCAGTGAATCCCGTCGTGAACAGGACGGGGAAGAAGGGAGCGCAGCTG
AGGAAGTGTTACAGTTCATTGCAAGTGAGAAGAATGATTTGCAGAGTACC
TGTGATGAATACAAGGAAAAGTATGGAGAAATGACGAAGATGTTCGATAC
CGCTAGGGAAGAAATCGAGAATCTGCGAGTGAAGAACTCGTCCTTAGAGA
ACTGTACGAGGCTTTTGAAGGCCGAAATGGAAGAGTTGCGAGAAGCCAAG
AGGGATGAGGAAGTGAAAGCTCTCCGCGCTCAGCACGACGCGGAAATGGC
CCACCTCATAGCGAAGCAGTCCGTGCTACAAGCACAGTTTTTGGAGAAGC
AACTAAAAGAGGCTGAAGGCTCTTCAAAAGCAGTGAAAACCCGAATGGAA
GAGCTACGAAAAGTTCAGAACGAGCTTAGAAGCGTCGTCGCCGATAATTC
AAGGCAGTCTCGGATACATAATCGTAGATCTCCAAATGACTCGCCGGAGC
ACAGGGACCCTAAGCCGCTTGGTCATCTAGGGATGGCTCTTGCACGTCGA
AAGAGTACAATCATTGGACAAAAGGCAAATGAACAAGTCGGACCCGAAAT
GAAAAATGAGTCATCGGAAGTTGTGTCACCGACGTCAACTACCGATCATT
TCCGAACCGATGCGTCTGGTGACAAAATCACAGAGAGAAGGGGGCTGAAA
ACTTTGCGTCCCAAATTCACCGGGCAACAGGAAAGTGAAGAACATAGGGC
GGGTGTGGGACACGAAGAACGAGGAATGTTTCGGAAAAGATTTCGAAGTC
TTCGTCGCGGTGCACACGGAATATCAGAGGCTGAAGCTAGTCGTGAGCTG
AGAAGTAAGCTGTCAGGACTGACAGGGTTTAGGCGCTTGCTGTCGCTGAG
CAGACGCGAAGGTCATCAATCAGGTAGTGCGCGCAGTTCTGCGGTTTCCG
CACCGCAAACGTTAGATGCACTCGCGAAGAACCTTGAGGTCTTGCAAGAG
ATGGTCCATAGCAAACAGGAAGAGGTGAACCGTTTGCACAGGGAGTTGCG
ACGTGCTAAACAGCAATCCGACGCTTTTGAGCAACGTTTGAGGAAAGAAC
AGCACAAACGTGTAGAGATGAAGTACTGCTTTTCTTCAAACGCCAGCCCA
TCGACCGAAGTTGATGGAATCGGGGCGCCTTCGGTAGTAGATGACGGGGA
GAGCGGAGTACACAAATAA
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