Gchil7272.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7272.t1
Unique NameGchil7272.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length566
Homology
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 733 bits (1893), Expect = 1.140e-260
Identity = 384/565 (67.96%), Postives = 443/565 (78.41%), Query Frame = 0
Query:   12 SRSRGIVLTSLRENFCRRWRRRAPVTYRXXXXXXXRTALLSVRPVSTREHAPQIHHYSSP-LSIPHTEFQEDTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQSTVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVS----SRYDDPNSNNLMCVLNKVDLIDDIKQGVVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNN------VPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            SRS    L +L + F  RWR      +            L +  VST+   P  H Y++P +++  T F EDTIFALSSGAGVTAGVAVIR+SGPH+  CL K+    ++  +PRPRYA+LR+LYHP+S ELLDEALVLFFPGP SFTGEDVVEL VHGSRAV+SAV++A+AD   P  ++RPAERGEFTRRAFENG++DLTAVEGLADLIAAETAMQRKQAL   +GH+KETLE WR +IKTCLAHVEAVIDFGDDVDDQVFE IIPR++ LR +I+ HL DAHRGEIIRGGARVAIVG PNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAV VSDTAGLRDSTNDPIEIEG+RRAR+AA RAD+TVLVHDVT GDL  A++ LP+RL +       DD     L+CVLNKVDL++   Q   +    VF+TSLL+NEG++E VDHLE+ IR +CEGG+   S+   K+TN       +PIITR RHRHHMKNAV ALDSF+ GR+G  PSLYLPMDLAAEDLRIA KELGAITG+ID EEVLD+IF EFCIGK
Sbjct:   14 SRSSRSSLGALCKTFSVRWR-----PFSACAHNNKSVRKLEIHAVSTKHETPTTHEYTNPAVNLTQTVFHEDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISAPSTRQKLPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADCTDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDDQVFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVTEGDLETALQALPSRLSACDGTQDPDDRADQRLVCVLNKVDLVNTSDQSSKDKDIEVFKTSLLRNEGVSELVDHLESMIRVVCEGGETGGSSENTKNTNTKNTSELMPIITRARHRHHMKNAVAALDSFVQGRTGAIPSLYLPMDLAAEDLRIAGKELGAITGQIDSEEVLDVIFNEFCIGK 573          
BLAST of Gchil7272.t1 vs. uniprot
Match: R7QKJ8_CHOCR (TrmE-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKJ8_CHOCR)

HSP 1 Score: 470 bits (1210), Expect = 6.090e-160
Identity = 241/381 (63.25%), Postives = 292/381 (76.64%), Query Frame = 0
Query:  191 VRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVSSRYDDPNSN--NLMCVLNKVDLIDDIKQG--VVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEG--GDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            VRPAERGEFTRRAFENG+MDLT+VEGLADLI+AETA+QRKQALRQ  G +++ LE WR +IK+CLAH EAVIDFGDDVDD  FE I+PR+ +L  +++ HL+D HRGEI+RGGARVAIVG PNAGKSTLLNALA+RPAAIVSP AGTTRDVVEV LDLNGLAV VSDTAGLR  T DPIEIEGM+RAR AA  AD+T+LVHD + G +  AI ++      S  D       N++CV NK+DLI D  +    V D P +F TSL+ N+GL+E   HLE  ++   EG  G  +D     K+  ++P+ITR RHRHHM  AV AL  F++GR+G++PSLYLPMD+A E+LRIAAKE+G+ITG I  EEVLD++F EFCIGK
Sbjct:    8 VRPAERGEFTRRAFENGRMDLTSVEGLADLISAETALQRKQALRQLGGEMRDLLEGWRAEIKSCLAHAEAVIDFGDDVDDDAFEAIVPRVSDLLMKMKGHLNDGHRGEIVRGGARVAIVGQPNAGKSTLLNALAQRPAAIVSPQAGTTRDVVEVHLDLNGLAVVVSDTAGLRQDTADPIEIEGMKRARQAASNADITILVHDASQGGMETAIESISMDRRGSENDMETGTHANIICVANKIDLIPDSFESKTTVRDIP-IFSTSLVNNDGLSELTTHLENLLKVRLEGSGGVGKDGERSSKAQGSIPVITRARHRHHMTLAVEALSVFMEGRTGDNPSLYLPMDIATEELRIAAKEIGSITGIIHVEEVLDVVFSEFCIGK 387          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 7.400e-144
Identity = 250/495 (50.51%), Postives = 325/495 (65.66%), Query Frame = 0
Query:   82 DTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQ-STVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDD---VDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLR--DSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVSSRYDDPNSNNLMCVLNKVDL-----IDDIKQGVVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            DTIFALSSG    AGVAVIR+SGP +   L  L+ +  + + +P  R A++RRLY P+  +LLDEALVL+ PGPRSFTGED  ELH HGSRAVV  V+ A+         +RPAERGEFT+RA+ NG+MDLT VEGLADLIAA+TA QR+QALRQ  G LK+  ESWR ++  CLAH EAVIDFGDD   VD+  +  I P++  L   +R HL D  RGEI+R G RVAI G PNAGKS+LLN LA+RPAAIVSP AGTTRDVV++QLD+ GL V +SDTAGLR  ++  D +E EG+RRAR+A   + +T+ V D +    NEA      + + +  +  +  +++ V NK DL       +  Q +V     V++ S    EG+  F+ HLE  I R  +          ++   + P+ITR RHRHH++  + AL+  +D      PSL  PMDLAAE+LR A+ ELG ITG +D EE+LD+IF++FCIGK
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAPGRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIPG----LRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVDEGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSS----NEAEGAAALKDLQATDEPADVGSVILVSNKADLGTSATQQEPMQAMVQAGQPVWQLSCKTGEGVEAFLRHLEDEIARRYQ---------TQQGQEDAPLITRARHRHHVQACLSALEGSMD------PSL--PMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A5J4YTG5_PORPP (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTG5_PORPP)

HSP 1 Score: 421 bits (1081), Expect = 1.280e-138
Identity = 253/516 (49.03%), Postives = 325/516 (62.98%), Query Frame = 0
Query:   80 QEDTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQS------TVPRPRYASLRRLYHPISA--------------ELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLV--RPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVSSRYDDPNSNNLMCVLNKVDLI-DDIKQGVVNDAPRVFRT-------SLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            ++DTIFALSSGA   AGVAVIRISGPH+ V LR LL +Q  S       +P+ R ASLR+L+  IS+              E+LD+ALVL FPGPRSFTGEDVVELHVHG  AVVSAV + +       + +  RPAE+GEFTRRAFEN +MDLT VEGLADLI+AET  QR+ ALRQ  G+L+   +SWR  I  C+A+VEAVIDFGDDVDD   + + P +R+L   +  H+ D  RGEI+R G RVAIVG PNAGKS+LLNALAKRPAAIVS  AGTTRDV+EV LD+ G+AV +SDTAG+R+ T D IE  G+ RA+ A   AD+ + V DV   D          R  S    D  S  ++ V NK DL  ++ +Q       ++ R        S     G+  F    ET +R +    ++   T  E   +   +ITR RHR H++NA+ +L +F+     ++    LP+D+A E+LR AA ELG ITG I  E+VLD++F++FCIGK
Sbjct:   11 EQDTIFALSSGASQKAGVAVIRISGPHADVVLRHLLSAQDVSDPDPELALPKARMASLRKLFGGISSTSVDAGAALVGNMKEILDQALVLRFPGPRSFTGEDVVELHVHGGLAVVSAVTNELMRLRMHPLAIPLRPAEKGEFTRRAFENDRMDLTEVEGLADLISAETTEQRRLALRQMGGNLRVLYDSWRAQIIKCMANVEAVIDFGDDVDDDALDAMAPLLRDLEAELSAHVQDNRRGEIVRSGVRVAIVGAPNAGKSSLLNALAKRPAAIVSSVAGTTRDVIEVHLDVAGVAVILSDTAGIREETEDAIEQIGIERAKQALADADLVLHVVDVRQTD------GASMRAFSDTQSD--SVGVVTVFNKTDLSSEEERQVAAATMQQLGRAKGSELWISCTTGAGMDAFQSAFETRVRELL--WNNSSGTGHECDASPTAVITRARHRVHVENAIHSLRTFIHEFLEQN---NLPLDIATEELRHAASELGQITGTIHTEDVLDIVFQDFCIGK 513          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 1.720e-137
Identity = 243/471 (51.59%), Postives = 306/471 (64.97%), Query Frame = 0
Query:  119 SQSTVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAI-ADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDD---VDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTL-----------PTRLVSSRYDDPNSNNLMCVLNKVDLIDD---IKQ------GVVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            S +  P PR ASLR+LY P+  E LD+A+VL+ PGPRSFTGED VELH HGSRAVV  V +A+ A     K  VR AE GEFT RAF NG+MDLT VEGLADLIAA+TA QRKQAL+Q  G L++T E WR ++K CLAH EAVIDFGDD   VD+  ++ I PR+R L + +R HL D  RGE+IR G RVAIVG PNAGKST+LN LA+RPAAIVSP AGTTRDVVEVQLD+ GL V VSDTAG+R++  DP+E EG+RRAR+AA RA +TVLV D       EA  +L           P  L +           + VLNK D ++    ++Q      G    +   +  SL   EG+ E +  L+  +  +     D+D T  E++    P+ITR RHR H++  + AL + + G  G      L +D+AAE+LRIA+ ELG ITG +D EEVLD+IF++FCIGK
Sbjct:    8 SSAPFPAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVDEAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGPFLKDAPPEDLETVLRAVGGDAGALLVLNKRDTVEGEHLLEQLRCAGAGKGGTSTAAYLVSLSTGEGVEEMLAGLQARLEEVF----DKDGTDDERA--EAPVITRARHRVHVERCLEALTASM-GEQG------LGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 419 bits (1078), Expect = 1.270e-136
Identity = 271/641 (42.28%), Postives = 347/641 (54.13%), Query Frame = 0
Query:   55 PVSTREHAPQIHHYSSPLSIPHTEFQEDTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQSTV-----------------------------------PRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIA--DSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDD----QVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGD------------LNEAIRTLPTRLVSSRYD-----------------DPNSNNLMCVLNKVDLIDDIKQGVVNDAP------------------------------------------------------------RVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            P + +E    I    SPL  P +   EDTIFAL++G    AGVAV+RISGP S   L+ L  + + S+                                    P  R A +RRLY P + +LLDEALVL+ PGPRSFTGED VELH HGSRAV++ V+DA+A   +AS    VR AERGEFT+RA+ NG+MDLT VEGLADL+AA+TA QRKQAL+Q  G L++  E WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I  HL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQ+D+ GL VT+SDTAGLR++T+D IE EGMRRAR A   A + + V D T+ D              EA       + +++ D                     ++L+ V NK DL   + +G   +A                                                             RV++ S    EGL  F++HLE  +R   +G  D++S          P+ITR RHR H++  +LAL      R+ + P +  P+DLAAE+LRIA+ ELG ITG +  EE+LD+IF++FCIGK
Sbjct:    5 PRTNKEDGDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAEAAVTAAQRDYAAETEGVFGGXXXXXXXXXLDDLIVVANKADLALTLLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGTEGDEEGTSGSGGRVWKVSCKTKEGLDGFMEHLEAEVRSRFQGAADDES----------PLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627          
BLAST of Gchil7272.t1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 4.070e-133
Identity = 272/640 (42.50%), Postives = 346/640 (54.06%), Query Frame = 0
Query:   55 PVSTREHAPQIHHYSSPLSIPHTEFQEDTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQSTV----------------------------------PRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIAD--SASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDD----QVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTS--------GDLNEAIRTLPTRLVSS--RYDDPNS-----------------NNLMCVLNKVDLIDDIKQGVVNDAP--------------------------------------------------------------RVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            P + +E    I    SPL    +   EDTIFAL++G    AGVAV+RISGP S   L+ L  + + S+V                                  P  R A +RRLY P + +LLDEALVL+ PGPRSFTGED VELH HGSRAV++ V+DA+A   +AS    VR AERGEFT+RA+ NG+MDLT VEGLADLIAA+TA QRKQAL+Q  G L++  E WR  +K CLAH EAVIDFGDD +D      F  ++PR+R L   I  HL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQ+D+ GL VT+SDTAGL  +T+D IE EGMRRAR A   A + + V D T+        G L E  +       ++  + DD                    ++L+ V NK DL   + +G   +A                                                               RV++ S    EGL  F++HLE  +R   +G  D++S          P+ITR RHR H++  +LAL      R+ + P +  P+DLAAE+LRIA+ ELG ITG +  EE+LD+IF++FCIGK
Sbjct:  169 PRTNKEDGDLISTTRSPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAAATAAQRDDAAEMEGVFGSGSSGGGSAALDDLIVVANKADLALTLLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGTEGDEEGRSGGGGRVWKLSCKTKEGLDGFMEHLEAEVRSRFQGAADDES----------PLITRRRHRQHVEACLLAL------RAAQRPQM--PLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A484EFB1_BRELC (TrmE-type G domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFB1_BRELC)

HSP 1 Score: 395 bits (1016), Expect = 3.920e-129
Identity = 244/497 (49.09%), Postives = 318/497 (63.98%), Query Frame = 0
Query:   79 FQEDTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQSTVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDDQVF---EQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVSSRYDDPNSNNLMCVLNKVDLIDDIKQGVVNDA------PRVFRTSLLQNEGLAEFVDHLETTIR-RICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            ++ DTI+ALSS  G  AGVAVIRISG  + +CL++L  S    T+PRPR+A+LR+LYHP +   LD+ALVL FP P SFTGEDVVELH HGS AV+S+V++A+  S  P    R AE GEFT RAF+N ++DL  VEGLADL++AET  QR QALRQ +G + E  E WR  +  CLA+VEA+IDFGDD DD  F   E  + R+REL D I  HL D  RGEI+R G +VAIVG PNAGKS+LLN LA+RPAAIVS  AGTTRD+V+V L++ G  V VSDTAGLR+ T D IE EG+ RA   A  AD+ V++ D+ +             L++ +Y     +  M VLNK DL+D I    V +        R+   S  + + +  FVD+L + ++ +I E G +        STN   IITR RHR ++ + + +LD FL      DP      +LAAEDLR A   +G I G+ID E++LD++F +FCIGK
Sbjct:   32 YELDTIYALSSAPG-KAGVAVIRISGEQANLCLQQLSKSL---TLPRPRFAALRKLYHPKTKTHLDDALVLRFPHPHSFTGEDVVELHTHGSAAVISSVLEAL--SIVPHC--RAAEAGEFTERAFDNDKIDLLQVEGLADLLSAETEAQRHQALRQLSGDIGEIYEGWRHTLVKCLAYVEAMIDFGDDEDDVTFAAYEAAVKRVRELADSICGHLADNRRGEILRNGFQVAIVGPPNAGKSSLLNRLARRPAAIVSSIAGTTRDIVQVPLNIAGYPVIVSDTAGLRE-TEDVIEKEGVLRAEQCASDADICVVMMDIQNAGT----------LLTEKYQSYLRSGAMIVLNKSDLVDKIHIESVLETVDSKLLERLLVVSCTEGDNIEAFVDNLASIVKEKIEESGGN--------STNGA-IITRERHRQNLVSCLSSLDQFL-----LDP---YQSELAAEDLRRAVAAIGRILGRIDVEDILDVLFADFCIGK 492          
BLAST of Gchil7272.t1 vs. uniprot
Match: A0A1V9Y6N3_9STRA (tRNA modification GTPase TrmE n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6N3_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 3.480e-127
Identity = 228/487 (46.82%), Postives = 304/487 (62.42%), Query Frame = 0
Query:   82 DTIFALSSGAGVTAGVAVIRISGPHSTVCLRKLLHSQSQSTVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDDVDD---QVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNEAIRTLPTRLVSSRYDDPNSNNLMCVLNKVDLIDDIKQGVVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            DTI+ALSS  G  AGVAV+RISGP +  CL +L     +  +P+PR A +R ++HP S ELLD A+ + FP P+SFTGEDVVELH+HGSR VV  V+ A+A+  S     RPAE GEFT RAFEN +MDL  VEGLADL+ AET  QRKQAL Q +G + +  E WR  +  C+AH EA+IDFGDD DD     ++ +I +++EL   I+ HL D  RGEI+R G +VAI+G PNAGKS+LLN LA+R AAIVSP AGTTRD+V+V L+L G  VT+SDTAG+R+ T+D IE EG+ RA      A + +LV DV   ++ E++ TL  +            N + VLNK DL        V +A  V   S     G+   ++ L+  +  +    +DE   +         +ITR RHR H+ + V+ L +FL     E P      +LAAEDLR A   +G I G++D E++LD++FK+FCIGK
Sbjct:   20 DTIYALSSAEG-RAGVAVVRISGPQANWCLMQL-SKDKKKPLPKPRMAVVRDIHHPTSRELLDSAMAIRFPQPKSFTGEDVVELHLHGSRPVVKGVLQALAEIPS----CRPAEAGEFTERAFENHKMDLMQVEGLADLLNAETEAQRKQALHQISGSVGQVYEEWRMTLIRCMAHAEAMIDFGDDEDDVTDAAYDSVILKVQELLGSIQKHLADGRRGEILRNGVQVAILGAPNAGKSSLLNILAQRDAAIVSPIAGTTRDIVQVPLNLAGYPVTLSDTAGIRE-TDDIIEQEGVLRAHKCREEAHIKLLVVDVQGSNIKESVETLIDQ------------NTIVVLNKSDLASVQLSSEVKNAKAVCSISCQSGIGIDSLLEILQRQVSEMFSHVNDEAQGL---------LITRERHRKHLNDCVIHLSNFL-----EHPH---QSELAAEDLRRAIHSIGRIVGRVDVEDILDVLFKDFCIGK 470          
BLAST of Gchil7272.t1 vs. uniprot
Match: UPI001885C8CF (tRNA modification GTPase GTPBP3, mitochondrial isoform X1 n=4 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885C8CF)

HSP 1 Score: 387 bits (995), Expect = 2.090e-125
Identity = 238/528 (45.08%), Postives = 313/528 (59.28%), Query Frame = 0
Query:   58 TREHAPQIHHYSSPLSIPHTEFQEDTIFALSSGAGVTAGVAVIRISGPHSTV---CLRKLLHSQSQSTVPRPRYASLRRLYHPISAELLDEALVLFFPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFTRRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCDIKTCLAHVEAVIDFGDD--VDDQVFEQIIPRIRELRDRIRTHLHDAHRGEIIRGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHD--VTSGDLNEAIRTLPTRLVSSRYD------DPNSNNLMCVLNKVDLIDD-------IKQGVVNDAPRVFRTSLLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRHHMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDCEEVLDLIFKEFCIGK 565
            T    P   H SS   +P  E    TIFALSSG G   GVAV+RISGP S+    C+  L H+     +P PR A LR + HP S E+LD  LVL+FP P SFTGED VE H+HG  AV +AV+ A+         +RPAE GEFTRRAF+ G++ LT VEGL DLI AET  QR+QALRQ +G L    + W  ++K CLAHVEA IDF +D  ++D V  ++   +R+L+  +  HL D  RGE +R G +V I G  NAGKS+LLN L +RPAAIVSP AGTTRDVVE  LD+ G  + +SDTAGLRD T D +E EG+RRAR+   +AD+T++V D  +   D+ +A   L   L +   D      D  S+  + VLNK DL+ +       +  G ++  P V   S   NEGL +F+  L + ++ +C  GD           +  P +T+ RHR H++  V ALD +   R        L + LAAE +R+A   LG ITGK+  EE+LD+IFK+FCIGK
Sbjct:   40 TSRWTPLFRHLSSFDGVPPAE----TIFALSSGHG-KCGVAVVRISGPASSTALRCMAGLTHN-----LPVPRSALLRSITHPQSKEVLDRGLVLWFPAPHSFTGEDSVEFHIHGGPAVTAAVLQALGSVPG----MRPAESGEFTRRAFQAGKLGLTEVEGLGDLIHAETEAQRRQALRQMSGELGHLYQGWSQNMKRCLAHVEAFIDFSEDELIEDGVLTRVDGMVRDLQSEVVRHLRDQRRGERLRSGVQVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGTTRDVVETALDIGGFPLVLSDTAGLRD-TRDLVEKEGVRRARERVAQADLTLVVVDSSLLPTDVKQAPDFLQDHLRNVLLDQEQIHADLPSDRFLVVLNKADLLPEQQRQMLQVNFGCISGLPHVCVISCHTNEGLQDFLATLHSRVKTLC--GDP---------LSGAPTLTQARHRAHLQQCVAALDQYQRYRD-------LDLALAAEGIRLALTSLGRITGKVGPEEILDIIFKDFCIGK 534          
The following BLAST results are available for this feature:
BLAST of Gchil7272.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXG2_9FLOR1.140e-26067.96tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
R7QKJ8_CHOCR6.090e-16063.25TrmE-type G domain-containing protein n=1 Tax=Chon... [more]
A0A836CK05_9STRA7.400e-14450.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A5J4YTG5_PORPP1.280e-13849.03tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
A0A4D9CTT5_9STRA1.720e-13751.59TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A6H5K111_9PHAE1.270e-13642.28TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG51_ECTSI4.070e-13342.50TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A484EFB1_BRELC3.920e-12949.09TrmE-type G domain-containing protein n=1 Tax=Brem... [more]
A0A1V9Y6N3_9STRA3.480e-12746.82tRNA modification GTPase TrmE n=1 Tax=Thraustothec... [more]
UPI001885C8CF2.090e-12545.08tRNA modification GTPase GTPBP3, mitochondrial iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018948GTP-binding protein TrmE, N-terminalPFAMPF10396TrmE_Ncoord: 83..207
e-value: 7.2E-37
score: 126.3
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430tRNA modification GTPase MnmE domain 2coord: 209..565
e-value: 2.7E-101
score: 341.7
IPR004520tRNA modification GTPase MnmETIGRFAMTIGR00450TIGR00450coord: 95..565
e-value: 3.1E-80
score: 268.4
IPR004520tRNA modification GTPase MnmEHAMAPMF_00379GTPase_MnmEcoord: 82..565
score: 29.653099
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 305..407
e-value: 8.5E-21
score: 74.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 304..488
e-value: 2.7E-101
score: 341.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 156..464
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 211..562
e-value: 5.7E-48
score: 164.2
IPR027266GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1GENE3D3.30.1360.120Probable tRNA modification gtpase trme; domain 1coord: 77..208
e-value: 1.4E-42
score: 146.6
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 304..441
e-value: 1.2E-17
score: 62.2
NoneNo IPR availablePANTHERPTHR42714TRNA MODIFICATION GTPASE GTPBP3coord: 81..565
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 81..565
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..565
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availableSUPERFAMILY116878TrmE connector domaincoord: 209..565
IPR031168TrmE-type guanine nucleotide-binding domainPROSITEPS51709G_TRMEcoord: 303..469
score: 57.417309
IPR031168TrmE-type guanine nucleotide-binding domainCDDcd04164trmEcoord: 301..464
e-value: 1.32577E-45
score: 156.115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:926093..927790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7272.t1Gchil7272.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 926093..927790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7272.t1 ID=Gchil7272.t1|Name=Gchil7272.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=566bp
MALLFAHSVAISRSRGIVLTSLRENFCRRWRRRAPVTYRPITYRPIRTAL
LSVRPVSTREHAPQIHHYSSPLSIPHTEFQEDTIFALSSGAGVTAGVAVI
RISGPHSTVCLRKLLHSQSQSTVPRPRYASLRRLYHPISAELLDEALVLF
FPGPRSFTGEDVVELHVHGSRAVVSAVIDAIADSASPKVLVRPAERGEFT
RRAFENGQMDLTAVEGLADLIAAETAMQRKQALRQFTGHLKETLESWRCD
IKTCLAHVEAVIDFGDDVDDQVFEQIIPRIRELRDRIRTHLHDAHRGEII
RGGARVAIVGLPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNG
LAVTVSDTAGLRDSTNDPIEIEGMRRARDAACRADVTVLVHDVTSGDLNE
AIRTLPTRLVSSRYDDPNSNNLMCVLNKVDLIDDIKQGVVNDAPRVFRTS
LLQNEGLAEFVDHLETTIRRICEGGDDEDSTIKEKSTNNVPIITRVRHRH
HMKNAVLALDSFLDGRSGEDPSLYLPMDLAAEDLRIAAKELGAITGKIDC
EEVLDLIFKEFCIGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018948GTP-bd_TrmE_N
IPR027368MnmE_dom2
IPR004520GTPase_MnmE
IPR006073GTP-bd
IPR027417P-loop_NTPase
IPR025867MnmE_helical
IPR027266TrmE/GcvT_dom1
IPR005225Small_GTP-bd_dom
IPR031168G_TrmE