Gchil2007.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2007.t1
Unique NameGchil2007.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length672
Homology
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A2V3III2_9FLOR (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III2_9FLOR)

HSP 1 Score: 439 bits (1130), Expect = 6.920e-144
Identity = 307/557 (55.12%), Postives = 378/557 (67.86%), Query Frame = 0
Query:  122 VLAVPSL-------PSIARIATYDDISTTFNLVYAVTDSCPSSVTFGVYTNDERQFPILPPSNIEEDGSQCSGEGSLNFVTERTVNEPELLEALRLESFREALSKNGNAEALVNSKITNDLLVGWHSGTRTCGSLSYPTETIYFVIREDQDYKITFRRSDSSNRVNIPPNLRSLLIVAPRNQVCLLVDKSTNPDQDVTLLTEYSNGTVANSQLTTAGAIALEPPNEAFTDEDNSSSSAXXXXXXXXXXXXXXXIADAPPSQSISPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSGTLESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGAAGGIAFEDDLESSSEENDGSACFPASAVVRTERGDVPMHQVQIGDRVQTAIGFSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLALEEGSRIGRWMPRGEAEVVGL 671
            VLAVP L       P+  R+ATY+DISTTF   YAV++SCPSS+TF  YTNDERQFPI+  S+IEEDGSQC+G+  L  +T  T+ +  L++ L L+ F++A+S + NA AL  SK  N+LL GWH+ TRTCG  SYP ETIY +I ED+D+ +TF  +   +R+ IPP  R+LL++AP NQ+CL VD  TNPD DV L+T+   G      LT  G    EP   +   ED +S   XXXXXXXXXXXXXXX                       XXXXXXXXXXXXXXXXXXX     ++              XXX  XXXXXXXXXXXXXXXXXXXXXXXXXX   GA G +  E+   +  +E+DGSACFPASA V + RG VPM  ++IGDRV+TA G+SDV++FTHR R     F KL  +SGREL V+ GHY+++ NGDL AA++V   DVLRMA+ SEDG++++  ++  +GLYNPQTESGSIVVNGF+TSTYTTAV+PK+AH ALLMPVR MY VWRWPVEQLS  L EG+   +WMPRG A V GL
Sbjct:   23 VLAVPHLSHYHSRLPTTVRVATYEDISTTFQRFYAVSESCPSSITFANYTNDERQFPIIATSDIEEDGSQCTGDDPLFIITGETITQEGLMDKLNLQDFQDAISSSPNANALAKSKYVNNLLWGWHASTRTCGENSYPPETIYTIINEDEDFSLTFSNNSVRDRITIPPTKRALLVIAPNNQICLFVDPDTNPDGDVILVTQDGEGAEDTFILTQNGR---EPITSSSDSEDGASDXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXXXXXXXXXXVVDVTEPVPPAPSENETXXXSAXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAGGALGDENVDSTPDDEDDGSACFPASARVYSSRGTVPMQDLKIGDRVKTANGYSDVIMFTHRSRSTIHTFVKLHTQSGRELTVTGGHYVYKQNGDLAAAATVSVSDVLRMANASEDGTIMKIEKVSGIGLYNPQTESGSIVVNGFITSTYTTAVEPKLAHMALLMPVRFMYGVWRWPVEQLSSILNEGTIAAQWMPRGNALVTGL 557          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A2V3IX71_9FLOR (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX71_9FLOR)

HSP 1 Score: 133 bits (335), Expect = 1.240e-29
Identity = 92/206 (44.66%), Postives = 119/206 (57.77%), Query Frame = 0
Query:  464 PGAAG-GIAFEDDLESSSEENDGSACFPASAVVRTERGDVP-MHQVQIGDRVQTAIG-FSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDS-EDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLALEEGS-RIGRWMPRG 664
            PG  G G+   D    S +++D + CFPA A V+ E G    M  VQ+GDRV    G FS V +FTH+L   ++GF  ++  SG  L ++ GHYL+ N G L AAS+V  GD L +AD S  D + V TV     GL+NPQT  G IVVNG   STYTTAV+P +AH ALL P+R  Y    + +     A E G+ RI  +MP G
Sbjct:  285 PGIIGEGLDSTDAASPSPDDDDDAVCFPADATVQLEDGSAKKMGDVQLGDRVMVDHGIFSPVFMFTHKLSTVRYGFVNIQTSSGNTLSLTPGHYLYVN-GHLSAASTVKNGDTLMLADSSLTDVTQVSTVT--STGLFNPQTLHGDIVVNGLKASTYTTAVEPGLAH-ALLSPLRAAYSRLGFSLR----AFEAGADRIASYMPSG 482          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A2V3IFE6_9FLOR (Sonic hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE6_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 1.720e-28
Identity = 84/197 (42.64%), Postives = 116/197 (58.88%), Query Frame = 0
Query:  473 EDDLESSSEENDGSACFPASAVVRTERGDVP-MHQVQIGDRVQTAIG-FSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLALEEGS-RIGRWMPRGEA 666
            ++  E+++E++DGS CFPA   V  E G V  M QV IGDRV+     FS+V +FTHRL+ G+  F K++  S   + ++ GHYLF N G L AA +V  GD++ +A   E  +V    ++   GLYNPQT SG IVVNG   STYTT VDP  AH  LL P R +Y+ +       + A E G+  + +  P+G A
Sbjct:  226 KESAEATAEDDDGSTCFPADTTVELEDGSVKEMAQVNIGDRVRVGRSMFSEVFMFTHRLQDGENYFVKIETDSSG-ISLTKGHYLFVN-GVLAAAKTVQVGDLVELAS-GETATVRAVKKVKGTGLYNPQTISGDIVVNGIRASTYTTTVDPAFAHR-LLTPFRALYQAFG----VATSAFERGAVNLAKLAPQGAA 414          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A1X6P3R7_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3R7_PORUM)

HSP 1 Score: 130 bits (327), Expect = 5.970e-28
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query:  468 GGIAFEDDLESSSEENDGSACFPASAVVRTERG-DVPMHQVQIGDRVQTAI-GFSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLALEEGS-RIGRWMPRG 664
            G +A  DD   S  ++D S CFPASA V  + G  V M Q+ +GD V+ A   FS V LFTH++  G F F KL   SG  L V+  HY++ N G + AA +V  GD L +   ++   +  T  + + GLYNPQT  G IVVNG   ST+TTAV+P++A +ALL P+R +++         + AL+ GS R+   +PRG
Sbjct:  474 GDVAGVDDALPSPSDDD-SVCFPASAEVELDTGRTVTMDQLAVGDNVRVAADAFSRVFLFTHKIASGSFAFVKLTTASGASLTVTRSHYVYAN-GKMTAAGAVKLGDKLELVGAAKCDIITATSPVTETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVA-SALLAPLRALFRA----TGMSTSALDAGSARLAALLPRG 666          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A1X6P3Z4_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Z4_PORUM)

HSP 1 Score: 122 bits (307), Expect = 1.320e-26
Identity = 77/190 (40.53%), Postives = 111/190 (58.42%), Query Frame = 0
Query:  478 SSSEENDGSACFPASAVVRTERG-DVPMHQVQIGDRVQ-TAIGFSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLALEEGS-RIGRWMPRG 664
            S ++ +D   CFPASA V  + G  V M Q+ +GD V+ +A  FS V LFTH++  G F F KL   SG  L V+  HY++ N G + AA +V  GD L +   ++   +  T  + + GLYNPQT  G I VNG   ST+TTAV+P++A +ALL P+R +++         + AL+ GS R+   +PRG
Sbjct:  198 SPTDGDDDDVCFPASAQVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKVAAGSFPFVKLTTASGASLTVTRSHYVYAN-GKMTAAGAVKLGDELELVGAAKCDIITATSPVTETGLYNPQTLHGDIFVNGIRASTFTTAVEPRVA-SALLAPLRALFRA----TGVSTSALDAGSARLAALLPRG 381          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A1X6P3Y5_PORUM (HintN domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Y5_PORUM)

HSP 1 Score: 123 bits (308), Expect = 1.030e-25
Identity = 76/173 (43.93%), Postives = 104/173 (60.12%), Query Frame = 0
Query:  468 GGIAFEDDLESSSEENDGSACFPASAVVRTERG-DVPMHQVQIGDRVQ-TAIGFSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYK 638
            G +A  DD   S  ++D S CFPASA V  + G  V M Q+ +GD V+ +A  FS V LFTH++  G FGF KL   S   L V+  HY++ N G + AA +V  GD L +   ++   V     I + GLYNPQT  G IVVNG   ST+TTAV+P++A +ALL P+R +++
Sbjct:  410 GDVAGVDDALPSPSDDD-SVCFPASAEVELDTGRTVTMDQLAVGDNVRVSADAFSRVFLFTHKIATGSFGFVKLTTASAASLTVTRSHYVYAN-GKMTAAGAVKLGDKLELVGAAKCDIVTAISPITETGLYNPQTLHGDIVVNGIRASTFTTAVEPRVA-SALLAPLRALFR 579          
BLAST of Gchil2007.t1 vs. uniprot
Match: UPI001E1DDBBD (warthog protein 6-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDBBD)

HSP 1 Score: 116 bits (291), Expect = 4.180e-25
Identity = 73/181 (40.33%), Postives = 102/181 (56.35%), Query Frame = 0
Query:  463 PPGAAGGIAFEDDLESSSEEN--DGSACFPASAVVRTERGDVP-MHQVQIGDRVQTAIG-FSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKV 639
            P G  G     D   SS   +  +GS+CFP SA+V  E G    M +++IGDRV+     FS+V +FTH+   G + F K+   SG  + ++ GHY+  N G L AAS V  GD+L++    E   V +   +   G+YNPQT  G IVV G   STYTTAV+P++AH  L   +R MY++
Sbjct:  105 PDGGNGTXXXXDPKSSSPSPSAVNGSSCFPGSAMVELESGARQRMDKMKIGDRVKVGRAEFSEVFMFTHKTHTGIYDFVKITTSSGHSVSLTGGHYIHVNGG-LAAASVVAVGDMLQLGT-GEATEVTDVTCVQSKGIYNPQTLHGDIVVGGIRVSTYTTAVEPRLAHAGLG-AIRSMYRI 282          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A1X6PIP5_PORUM (DOMON domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIP5_PORUM)

HSP 1 Score: 115 bits (287), Expect = 7.510e-24
Identity = 82/193 (42.49%), Postives = 104/193 (53.89%), Query Frame = 0
Query:  468 GGIAF-EDDLESSSEE------NDGSACFPASAVVRTERG-DVPMHQVQIGDRVQTAI---GFSDVLLFTHRLRGGQFGFTKLKVKSGRE-LIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDV---GLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKV---WRW 642
            GGI F   DL+++S++      +D SACFPASA VR   G DV M  +++GD V +A      +DV LFTH   G    F  L    GR  L+VS GHY++   G   AA +VV GD L    D+  G+ V    +      GLYNPQT SG + V+G+  STYTTAV P  A  AL  PVR  Y +   W W
Sbjct:  153 GGINFARSDLDATSDDGPTSTSDDESACFPASATVRATSGADVRMDALRVGDAVASAAVGGAITDVFLFTHADAGAVSRFVVLATGGGRRPLVVSPGHYVYLAGGRTAAARTVVVGDALV---DAATGAAVRVTAVSSAVAAGLYNPQTLSGDLAVDGYAVSTYTTAVAPAFAEAALA-PVRAAYGMGGGWLW 341          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A7S1XFD2_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFD2_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 8.150e-24
Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 0
Query:  487 ACFPASAVVRTERGDVPMHQVQIGDRVQTAIG-FSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMM 636
            ACFP  A V T+RG+V M  + IGD+V+   G FSDV  F+HRL  G   + K+  + GR L+VS  HYL  + G L+AASS+     +R+++   +  +V      + G +NP T  G++VV+GF+ S YTT V P++AH ALL P+R++
Sbjct:  391 ACFPGLATVVTKRGEVFMRDLLIGDKVEVEPGKFSDVFFFSHRLGAGSHQYLKITTEHGRVLLVSPNHYLLGSMGVLVAASSLSVPSTVRVSEG--ESRIVSIENTLEEGKFNPHTREGTLVVDGFLVSCYTTMVPPRLAHLALL-PLRIL 538          
BLAST of Gchil2007.t1 vs. uniprot
Match: A0A2V3IXZ1_9FLOR (Desert hedgehog protein B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXZ1_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 2.090e-22
Identity = 68/166 (40.96%), Postives = 105/166 (63.25%), Query Frame = 0
Query:  477 ESSSEENDGSACFPASAVVRTERGD-VPMHQVQIGDRVQTAIG--FSDVLLFTHRLRGGQFGFTKLKVKSGRELIVSDGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQTESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKV 639
            +   ++N GS CFP  A V TE G  V M ++Q+GDRV ++    +SD+ +FTH+       F K+  +SG+ L++S+GHYLF ++    AA++VV GD + +A  ++D  +V+   +   GL+NPQT  G+IVVNG + +T+T+A  P  A + LL PVR MYK+
Sbjct:  197 DHQGDKNTGS-CFPNDAFVSTEDGRIVSMKELQVGDRVLSSPDGTYSDIFMFTHKDESVAATFVKISTRSGKTLLLSEGHYLFVDDKTKTAAAAVV-GDTVTLASGTKD-RIVDIQIVLAKGLHNPQTLDGNIVVNGILATTWTSAAPPVTA-SLLLTPVRGMYKL 358          
The following BLAST results are available for this feature:
BLAST of Gchil2007.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3III2_9FLOR6.920e-14455.12Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A2V3IX71_9FLOR1.240e-2944.66Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IFE6_9FLOR1.720e-2842.64Sonic hedgehog protein n=1 Tax=Gracilariopsis chor... [more]
A0A1X6P3R7_PORUM5.970e-2841.50HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3Z4_PORUM1.320e-2640.53HintN domain-containing protein n=1 Tax=Porphyra u... [more]
A0A1X6P3Y5_PORUM1.030e-2543.93HintN domain-containing protein n=1 Tax=Porphyra u... [more]
UPI001E1DDBBD4.180e-2540.33warthog protein 6-like n=1 Tax=Mercenaria mercenar... [more]
A0A1X6PIP5_PORUM7.510e-2442.49DOMON domain-containing protein n=1 Tax=Porphyra u... [more]
A0A7S1XFD2_9RHOD8.150e-2442.38Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IXZ1_9FLOR2.090e-2240.96Desert hedgehog protein B n=1 Tax=Gracilariopsis c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 486..578
e-value: 3.3E-8
score: 43.3
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 483..645
e-value: 6.3E-21
score: 74.8
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 488..617
e-value: 4.1E-24
score: 87.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 342..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..404
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 344..640
NoneNo IPR availableCDDcd00081Hintcoord: 488..614
e-value: 5.76325E-13
score: 64.5978
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 488..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1689312..1691327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2007.t1Gchil2007.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1689312..1691327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2007.t1 ID=Gchil2007.t1|Name=Gchil2007.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=672bp
MLPDGFSFDDNGSTSRFAHDTANHGALAVTQQYNVPAHIALARLDASSSK
PLNHWTADVFVAFPQRNALLKASIRVHRPLSARSPLCFNLLSISYCDCLQ
MGSTRAYLLLILVLGCSFRSPVLAVPSLPSIARIATYDDISTTFNLVYAV
TDSCPSSVTFGVYTNDERQFPILPPSNIEEDGSQCSGEGSLNFVTERTVN
EPELLEALRLESFREALSKNGNAEALVNSKITNDLLVGWHSGTRTCGSLS
YPTETIYFVIREDQDYKITFRRSDSSNRVNIPPNLRSLLIVAPRNQVCLL
VDKSTNPDQDVTLLTEYSNGTVANSQLTTAGAIALEPPNEAFTDEDNSSS
SATNEDDTDDLSTTTEEIADAPPSQSISPEPSPSASSSAPPSTAPAPSVA
PILPVAPPTSDSGTLESSPSPLATVAISPSDFGTLIASPNAFATVAPSPS
ALSSIFPAASALPPGAAGGIAFEDDLESSSEENDGSACFPASAVVRTERG
DVPMHQVQIGDRVQTAIGFSDVLLFTHRLRGGQFGFTKLKVKSGRELIVS
DGHYLFRNNGDLMAASSVVAGDVLRMADDSEDGSVVETVRIFDVGLYNPQ
TESGSIVVNGFVTSTYTTAVDPKMAHTALLMPVRMMYKVWRWPVEQLSLA
LEEGSRIGRWMPRGEAEVVGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf