Gchil1992.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1992.t1
Unique NameGchil1992.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length448
Homology
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BLAST of Gchil1992.t1 vs. uniprot
Match: A0A2V3IFX5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFX5_9FLOR)

HSP 1 Score: 162 bits (409), Expect = 3.960e-41
Identity = 100/197 (50.76%), Postives = 124/197 (62.94%), Query Frame = 0 
Query:    2 MPSNLRSRAVKLSADKHHQ-PSLNFQNPRMKLSEDSYNALLVSIAAFILLLFGFYSLSLFSANHEIVGLHPPLSLHREIGDHFHKFSTRP---DWHDGHYDSPLEEQWQHD--QYDQHHDLYRDYYKQHPQIDGETYNAA------HDEDKIRYEDYKNDDYYHHEQHAHQPPRPHQLNGHVVEDRATDDHPDTRHE 186
            M S LRSRA+K S +K +Q P +N    R KLS+DSYNAL+V++AAF+LLLFGFYSLSLFSAN ++ GL PPLSLHR++GDHF K S R    DW D HYD P EE W+HD  +Y          Y  HPQ+              H  D+   + Y+N  YY++    HQPP+   L  HVVED+ATDDHP TR+E
Sbjct:    1 MASTLRSRALKFSTEKQYQLPGVNVHAQRRKLSDDSYNALVVAVAAFVLLLFGFYSLSLFSANQQLTGLEPPLSLHRDVGDHFSKRSNRARSLDWRDEHYDHPHEEHWEHDIPEYHDXXXXXXXXYDDHPQVQXXXXXXXXXXXXXHFVDQQIKDHYEN--YYNNHHQPHQPPKVDDLQHHVVEDKATDDHPTTRYE 195
The following BLAST results are available for this feature:
BLAST of Gchil1992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFX5_9FLOR3.960e-4150.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 248..328
e-value: 3.3E-5
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 428..444
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..427
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 445..447
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004439_piloncontigtig00004439_pilon:1579921..1581411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1992.t1Gchil1992.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004439_pilon 1579921..1581411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1992.t1 ID=Gchil1992.t1|Name=Gchil1992.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=448bp
MMPSNLRSRAVKLSADKHHQPSLNFQNPRMKLSEDSYNALLVSIAAFILL
LFGFYSLSLFSANHEIVGLHPPLSLHREIGDHFHKFSTRPDWHDGHYDSP
LEEQWQHDQYDQHHDLYRDYYKQHPQIDGETYNAAHDEDKIRYEDYKNDD
YYHHEQHAHQPPRPHQLNGHVVEDRATDDHPDTRHEHDHYHAHDHNKKVP
PPHSHDEYGYAENQGHYHYHDEHEHEHYDHHYEHDDQHEPHNHYEHGYYA
EEHSANAMQTNTMQTNTTQTNTTQTNTTQTNTTQTNTTPANTTQANTTQA
NTTQANTTQAITTQAITTQANTAQVISTTRSLTTPILIQAIVNRRSITLE
NVFLTTLVKQSIQTIINPYTKTHTIIIVVAHILALNMKHKESIKFILLQM
TFENSHHLLSGPNASSYECVQASRNGDFLLNFFLRVSLIVYWFTESK*
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