Gchil865.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil865.t1
Unique NameGchil865.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length339
Homology
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BLAST of Gchil865.t1 vs. uniprot
Match: A0A2V3IHW0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHW0_9FLOR)

HSP 1 Score: 381 bits (979), Expect = 1.350e-129
Identity = 199/311 (63.99%), Postives = 246/311 (79.10%), Query Frame = 0 
Query:   28 IFGVRVSRDHILRLSAILTLRTLLSIVDLPLEETASAYLASLLSSITNVTVFLALTSNYFHFEGLIGRIGSFIFPSSRKPSAFVTIYSKVVFVLGPVVSWLETAVITYEIMRIARRWETRMQRAQAQASTIPRRLLLALAFFCLVCTAAIATFLGMCHAKYAAGAVTACLSLLSYSFFNDDANIVEASLLCLYTCSILVFGWLESQSLSDEARATLLIITVLLVSVSMSRATRLLRLMMIGFEALCEEEQAGTKWGQGSVRRVFGVLTIIALTFRTLVWSEDVHQGEYLPLLCRSVQVVAVVFLYILYSQQ 338
            +FGVR SRDHILRLSAIL+LR LL++ DLPLE TA+AY+ SLLSS+TN+ + LALTSNYFHFEGL+GRIG+F FPS RKPSAF+ +Y+++VFVLGP+ SW ETAVITYEIM IARRWE  MQRA    S +PRRLLLA  F C+  + AI   LG+ + K  AGA TA L LL+YS+ NDDAN+VEA++L LY C++L+F   ESQ LSDE+RA LL+ TV+L+  +MSRATR +RL+ IGFE    EE+AG  WGQGSV+  FGVLTIIA+TFR L+WS++VH+GEY+   CR  QV+AVV LYI YSQ+
Sbjct:    1 MFGVRFSRDHILRLSAILSLRALLTVFDLPLENTATAYITSLLSSMTNMAIVLALTSNYFHFEGLLGRIGAFFFPSPRKPSAFIILYARLVFVLGPLASWFETAVITYEIMSIARRWEASMQRAATDGSHVPRRLLLAFTFLCITGSVAIGVTLGLENRKVGAGAATASLLLLTYSYLNDDANVVEAAMLSLYVCTLLIFAKGESQLLSDESRAMLLVGTVVLLCTAMSRATRFVRLLAIGFEEFYREEEAGIAWGQGSVQNSFGVLTIIAITFRILIWSQEVHEGEYVAEWCRITQVIAVVILYIFYSQR 311
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BLAST of Gchil865.t1 vs. uniprot
Match: R7Q3D9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D9_CHOCR)

HSP 1 Score: 73.9 bits (180), Expect = 7.450e-12
Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = 0 
Query:  236 SDEARATLLIITVLLVSVSMSRATRLLRLMMIGFEALCEEEQAGTKWG----------QGSVRRVFGVLTIIALTFRTLVWSEDVHQGEYLPLLCRSVQVVAVVFLY 332
            S E RA +L+ T  ++  +M+RA R  RL+ +G + L  EE+ G   G           G ++  +  + ++A+TFR LVW+  VH  EY+P LCR VQV+A++ L+
Sbjct:   69 SQEVRALVLMYTTTMLLTAMARAPRFARLLQVGADRLENEEKDGESAGAPGDTRPPAMSGFLKGAYNAVVLMAVTFRLLVWTGQVHNSEYMPALCRGVQVIAIILLH 175
The following BLAST results are available for this feature:
BLAST of Gchil865.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IHW0_9FLOR1.350e-12963.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3D9_CHOCR7.450e-1236.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 336..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..289
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 206..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 307..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 318..335
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..58
NoneNo IPR availableTMHMMTMhelixcoord: 290..307
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 239..256
NoneNo IPR availableTMHMMTMhelixcoord: 188..205
NoneNo IPR availableTMHMMTMhelixcoord: 212..229
NoneNo IPR availableTMHMMTMhelixcoord: 317..336
NoneNo IPR availableTMHMMTMhelixcoord: 119..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:701079..702095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil865.t1Gchil865.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 701079..702095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil865.t1 ID=Gchil865.t1|Name=Gchil865.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=339bp
MNFLFSPSQRNAGIRTFVAPFTAPAFTIFGVRVSRDHILRLSAILTLRTL
LSIVDLPLEETASAYLASLLSSITNVTVFLALTSNYFHFEGLIGRIGSFI
FPSSRKPSAFVTIYSKVVFVLGPVVSWLETAVITYEIMRIARRWETRMQR
AQAQASTIPRRLLLALAFFCLVCTAAIATFLGMCHAKYAAGAVTACLSLL
SYSFFNDDANIVEASLLCLYTCSILVFGWLESQSLSDEARATLLIITVLL
VSVSMSRATRLLRLMMIGFEALCEEEQAGTKWGQGSVRRVFGVLTIIALT
FRTLVWSEDVHQGEYLPLLCRSVQVVAVVFLYILYSQQ*
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