Gchil5473.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5473.t2
Unique NameGchil5473.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length519
Homology
BLAST of Gchil5473.t2 vs. uniprot
Match: A0A2V3J6A9_9FLOR (Luc7-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A9_9FLOR)

HSP 1 Score: 369 bits (948), Expect = 2.490e-118
Identity = 228/440 (51.82%), Postives = 276/440 (62.73%), Query Frame = 0
Query:    1 MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVREDEKLRWMRALLSECRTIVAEEDRKIRGQARRLQESYGCGGELSGLMIRNFDTLKKLGMVSQNAKIRVLSEIDENEPLSDDDTTMLHTSRDHSADANVDNLTKPEPTNNSDLPNEVQSNSLKGAESEEINNPGSDIKKDAGEEDEGENDDD----LDGFGLIKVIPAGDTPEDPATNENVKEKGSS--RSATDTKPTVTPTLDN----------PIGTEK------SQMANK-----------------SKQPEAESNAENCTLDCTGEKIVSLASDEGNVNVQTMS-----------NNGEKKEENNLMDKFYEIGVGPDGLQMLDRKQSKRVCACCGGYISLVDAESRLLSHFG 390
            MAYDSVRAQLDKLLG DRNGPLT +A +EPPNYRD+K+CKH+LLGFCPNDLYIKQRSEPGSCR EHSE AK +F++D+ +GRVRE EK RWMR LL+EC+ IV+EEDRKIRGQARRLQESYGCGG+L+ LMIRNFDTLKKLGMVSQNAKIR+LSEID++E +S+DD T+ HTS D SAD + D     +  NN   P+    N++   E++   NP                       LDGFGLIKVIPA DTP + A + +  +      +S  DTK  V P+ ++          P+  +K       Q ++K                 S  P    +  N T     EK     +   +V                  +   +E +N+MDKFYE GVGPDGL MLDRKQSKRVCACCGGYISLVDAESRLLSH+G
Sbjct:    1 MAYDSVRAQLDKLLGPDRNGPLTNTANHEPPNYRDSKYCKHFLLGFCPNDLYIKQRSEPGSCRCEHSEAAKQAFDEDDQKGRVRE-EKSRWMRLLLNECQNIVSEEDRKIRGQARRLQESYGCGGDLTALMIRNFDTLKKLGMVSQNAKIRILSEIDDDEIMSNDDATLPHTSMDPSADGSQDVQQLLKLGNNVKQPDHPSVNAVD--ENKANQNPXXXXXXXXXXXXXXXXXXXXXXXLDGFGLIKVIPASDTPVNKAGDADASKASQPPHQSNADTK--VVPSKESSQSLADDVKAPVSDKKPPEEQDKQDSDKXXXXXXXXXXDTKPLGVSSNPSITDHEPNTTEQFPNEKDGKTETHTNDVKTNAFEVEKSDDKPAEQESNTNEETDNVMDKFYEAGVGPDGLLMLDRKQSKRVCACCGGYISLVDAESRLLSHYG 435          
BLAST of Gchil5473.t2 vs. uniprot
Match: R7Q4L4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4L4_CHOCR)

HSP 1 Score: 95.1 bits (235), Expect = 1.330e-17
Identity = 88/279 (31.54%), Postives = 128/279 (45.88%), Query Frame = 0
Query:  131 MIRNFDTLKKLGMVSQNAKIRVLSEIDENEPLSDDDTTMLHTSRDHSADANVDNLTKPEPTNNSDLPNEVQSNSLKGAESEEINNPGSDIKKDAGEEDEGENDDDLDGFGLIKVIPAGDTPE---DPATNENVKEKGSSRSATDTKPTVTPTLDNPIG-TEKSQMANKSKQPEAESNAENCTLDCTGEKIVSLASDEGNVNVQTMSNNGEKKEENNLMDKFYEIGVGPDGLQMLDRKQSKRVCACCGGYISLVDAESRLLSHFGATTDMGVMAIGSMVA 405
            MIR+F TLKKLGMV ++AKIRVLSE++E+                      VD++ + +       P    + + +  +S                            FG+I VIPA  + +   DP T E    + +  + +  +   +P    P+  +E  + ++ SKQ     +A             +  +DE N    T +   +K EE      FY+ G GPDGL ML RKQS RVCACCGG+ISLVDAESRLLSH+G  +   ++ +   VA
Sbjct:    1 MIRDFGTLKKLGMVGEHAKIRVLSEMEEDV---------------------VDDVEEEQKR-----PASPGTRASEQKDSRXXXXXXXXXXXXXXXXXXXXXXXXXXXFGVISVIPASRSKKEDPDPLTPEKGDNEANKPAESARRDATSPAKATPLERSEGKKTSSPSKQSPTNGDAAEVHAHAPDADPKTDTADE-NQAAPTPAATEDKMEE------FYKKGTGPDGLLMLTRKQSLRVCACCGGFISLVDAESRLLSHYGGKSHHSLVQLRQKVA 246          
BLAST of Gchil5473.t2 vs. uniprot
Match: A0A7S3MGE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGE9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 7.010e-10
Identity = 30/73 (41.10%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    4 DSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEK 76
            DS RA LD L+G++RN    E  + +   YRD + CK +L+G CPND+++  + + G C+  HSE  K+ F+K
Sbjct:   13 DSQRALLDSLMGINRNNDRQEDQVTD---YRDDRVCKFFLVGMCPNDIFVNTKMDEGPCQKVHSEVLKADFQK 82          
BLAST of Gchil5473.t2 vs. uniprot
Match: T1J2U3_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J2U3_STRMM)

HSP 1 Score: 68.6 bits (166), Expect = 1.340e-8
Identity = 40/119 (33.61%), Postives = 64/119 (53.78%), Query Frame = 0
Query:    1 MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVREDEKLRWMRALLSECRTIVAEEDRKIRGQARRLQE 119
            MA  +  A LD+L+G DRN   TE        + D + CKHYL+ FCPN+L++  R++ G C   H E  KS +E+          +K+ +    L  C+ ++A+ +R+IR   +RL +
Sbjct:    1 MAAAAAAALLDELMGRDRNLAPTEK--KREIRWEDPQVCKHYLVKFCPNELFVNTRADLGPCEKIHDEQLKSEYERSPGY------QKMGYEEDFLRFCQGMMADVERRIRRGKQRLAQ 111          
BLAST of Gchil5473.t2 vs. uniprot
Match: UPI000BA81C23 (luc7-like protein 3 isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA81C23)

HSP 1 Score: 67.8 bits (164), Expect = 1.810e-8
Identity = 40/126 (31.75%), Postives = 73/126 (57.94%), Query Frame = 0
Query:    1 MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVR-EDEKLRWMRALLSECRTIVAEEDRKIRGQARRLQESYGCGG 125
            MA  S +A LD+L+G DRN   T+    +  ++ +++ CKH+L+ FCPNDL++  +++ G C   H E  K  +E+ +   ++  EDE +R+       C+ ++++ +R+I+   RRL   +  GG
Sbjct:    1 MALASAKALLDELMGRDRNLAPTDQ--KKEASWSNSQVCKHFLVKFCPNDLFVNTKADLGICNKIHDEKIKKEYEESDCFQQMGYEDEFIRF-------CQGMLSDVERRIQRARRRLALGHQEGG 117          
BLAST of Gchil5473.t2 vs. uniprot
Match: K1RWB4_CRAGI (Cisplatin resistance-associated overexpressed protein n=3 Tax=Crassostrea TaxID=6564 RepID=K1RWB4_CRAGI)

HSP 1 Score: 65.1 bits (157), Expect = 1.310e-7
Identity = 43/142 (30.28%), Postives = 73/142 (51.41%), Query Frame = 0
Query:    1 MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVR-EDEKLRWMRALLSECRTIVAEEDRKIRGQARRLQESYGCGGELSGLMIRNFDTLKKL 141
            MA  ++   LD+L+G DRN   TE    +  ++ D   CKH+L+ FCP++L+   R++ G C   H E  +  + K    G++  ED+ LR+++ L+S+        +++IR   +RL  +   G   S L     D +K L
Sbjct:    1 MASHALAQMLDELMGKDRNLAPTEK--RDQVHWSDPDVCKHFLVNFCPHELFTNTRADLGPCTKLHDEALRKEYTKSSKSGKMGYEDDFLRFLQGLISDV-------EKRIRRGHQRLALNNSQGSLSSNLNSLKDDKIKML 133          
BLAST of Gchil5473.t2 vs. uniprot
Match: A0A5J4YY99_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY99_PORPP)

HSP 1 Score: 64.7 bits (156), Expect = 1.730e-7
Identity = 52/190 (27.37%), Postives = 85/190 (44.74%), Query Frame = 0
Query:    2 AYDSVRAQLDKLLGVDRNG-------------PLTESAINEPPN--------YRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDE-------AEGRVREDEK--------LRWMRALLSECRTIVAEEDRKIRGQARRLQESYGCGGELSGLMIRNFDTLKKLGMVSQNAKIRVLSE 155
            AYD+VRAQLD L+G DR+G             PL E A + PP         Y D + C  +L G C ND++   + + G+C   HSE  +  F +D         + R +  ++        L+  R     C+ +V + +R+I  +  RL+  YG   E   +++ +      L   + + K+ V+SE
Sbjct:    4 AYDAVRAQLDALMGHDRDGGVELVGQRHSRRLPLHERARHTPPALQPEMTCAYADERVCSGFLFGVCLNDVFANTKLQRGACAHLHSEFVRDQFMRDYKHFNSTGTDARRKSSDRDVAAPSKLLQHERVCERACQELVNDVERRIAKRLERLRVEYGISDEPQTMLVSDPGVPLSLNSAAADEKL-VISE 192          
BLAST of Gchil5473.t2 vs. uniprot
Match: D5ABV1_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ABV1_PICSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.300e-7
Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 0
Query:    4 DSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVREDEKLRWMRALLSECRTIVAEEDRKIRGQARRLQE 119
            DS+R QLD L+G +RNG +TE       NY D   C+ YL G CP+DL+   + + G+C   HS   +  +E  +A+ +   D      R L       + E DRKI    RRL++
Sbjct:    2 DSLRKQLDTLMGTNRNGDVTEIK----RNYYDRDVCRLYLAGLCPHDLFQLTKMDLGACSKVHSLQLRKEYESAKAKAKDNYD------RELEDVLERHIGECDRKITRALRRLED 107          
BLAST of Gchil5473.t2 vs. uniprot
Match: A0A2P6TJ03_CHLSO (Luc7 3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJ03_CHLSO)

HSP 1 Score: 63.5 bits (153), Expect = 3.770e-7
Identity = 36/112 (32.14%), Postives = 57/112 (50.89%), Query Frame = 0
Query:    4 DSVRAQLDKLLGVDRNGPLTE-SAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVR---EDEKLRWMRALLSECRTIVAEEDRKIR 111
            D  RAQLD L+G DRN PL E         + D   CK++L GFCP + + + +++ G C   H +  +  +E+ +   + R   E + LRW   LLS+ R  +     ++R
Sbjct:    2 DEFRAQLDALMGEDRNVPLAERDERRSKRKFNDENVCKYHLCGFCPYEEFRRTKNDCGDCPCIHDDNCRKQYEELDDRSKDRYGYEADLLRWFERLLSDLRKRIDTNTERLR 113          
BLAST of Gchil5473.t2 vs. uniprot
Match: A0A293MX17_ORNER (Cisplatin resistance-associated overexpressed protein (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A293MX17_ORNER)

HSP 1 Score: 62.4 bits (150), Expect = 7.670e-7
Identity = 38/129 (29.46%), Postives = 67/129 (51.94%), Query Frame = 0
Query:    1 MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPNDLYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVREDEKLRWMRALLSECRTIVAEEDRKIRGQARRL----QESYGCGG 125
            MA  S +  LD+L+G DRN   TE       ++ D   CKH+L+ FCPN+L++  +++ G C   H E  K  F +  +  +     K  +    L  C++++++ +++IR   +RL    ++  G GG
Sbjct:    1 MALASAKQLLDELMGRDRNLAPTEK--KNTCSWEDQDVCKHFLVKFCPNELFVNTKADLGPCNKIHDERLKKEFTEYYSYEQSSRYRKEGYEEGFLQFCQSMLSDVEKRIRRARQRLSLGNKDIPGAGG 127          
The following BLAST results are available for this feature:
BLAST of Gchil5473.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3J6A9_9FLOR2.490e-11851.82Luc7-like protein n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q4L4_CHOCR1.330e-1731.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3MGE9_9STRA7.010e-1041.10Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
T1J2U3_STRMM1.340e-833.61Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
UPI000BA81C231.810e-831.75luc7-like protein 3 isoform X1 n=2 Tax=Limulus pol... [more]
K1RWB4_CRAGI1.310e-730.28Cisplatin resistance-associated overexpressed prot... [more]
A0A5J4YY99_PORPP1.730e-727.37Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
D5ABV1_PICSI2.300e-735.34Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A2P6TJ03_CHLSO3.770e-732.14Luc7 3 n=1 Tax=Chlorella sorokiniana TaxID=3076 Re... [more]
A0A293MX17_ORNER7.670e-729.46Cisplatin resistance-associated overexpressed prot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004882Luc7-relatedPFAMPF03194LUC7coord: 4..120
e-value: 1.7E-22
score: 80.3
IPR004882Luc7-relatedPANTHERPTHR12375RNA-BINDING PROTEIN LUC7-RELATEDcoord: 4..120
coord: 351..402
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1960629..1962414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5473.t2Gchil5473.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1960629..1962414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5473.t2 ID=Gchil5473.t2|Name=Gchil5473.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=519bp
MAYDSVRAQLDKLLGVDRNGPLTESAINEPPNYRDAKFCKHYLLGFCPND
LYIKQRSEPGSCRLEHSETAKSSFEKDEAEGRVREDEKLRWMRALLSECR
TIVAEEDRKIRGQARRLQESYGCGGELSGLMIRNFDTLKKLGMVSQNAKI
RVLSEIDENEPLSDDDTTMLHTSRDHSADANVDNLTKPEPTNNSDLPNEV
QSNSLKGAESEEINNPGSDIKKDAGEEDEGENDDDLDGFGLIKVIPAGDT
PEDPATNENVKEKGSSRSATDTKPTVTPTLDNPIGTEKSQMANKSKQPEA
ESNAENCTLDCTGEKIVSLASDEGNVNVQTMSNNGEKKEENNLMDKFYEI
GVGPDGLQMLDRKQSKRVCACCGGYISLVDAESRLLSHFGATTDMGVMAI
GSMVAFETTRIGVRAEIIAVEIEGAGMMIGTVIPTRVSHSTIHKEGKVVA
RGIQMLVMPMTTGTVRDTEMMIMTMIGLPDDMTGTMVGESVIDLHHHIVG
LDVGEGTTKWTLSCLLNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004882Luc7-rel