Gchil5253.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5253.t1
Unique NameGchil5253.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length319
Homology
BLAST of Gchil5253.t1 vs. uniprot
Match: A0A2V3J5L1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L1_9FLOR)

HSP 1 Score: 397 bits (1020), Expect = 4.620e-136
Identity = 194/313 (61.98%), Postives = 231/313 (73.80%), Query Frame = 0
Query:    6 SVSPRRPIRSRHHRWVRIAPCATTPVPDTQTLKQQLEAILEGIPRFLDNASNRVEKAVTDIPDQVKYLFSEEGPLGVLTFWRENKDNISNTGQQLLESGERLAKGDAKGFREKASGINLSWLRPVRRLGSSESLDDATIVTDQVRKTVLFLIDSLTPWDFDRHDFGLTFATVWNDVDTSKSADVRVPSLKMTSTIKPVEQEWKLSARGKLFALGENAMVFGKAGLYLAGDKAAYIGAEADRVWSIPRLPNTKIFANANYRSSRKPQAEPFKVSCGIQQDLEVAKGLELTLRIALNLTEKLGFSVYPVPNGSYF 318
            ++SPRRP        +   P ATT   +  TL++QLE ILE IP FLD  +N+VE+AV  IP++V+YLFSEEGPLG L FWRENK+NI++TGQQLLESGE L KGDA GFR+KASGI+ SWL+P R             V DQV+ T LFLI+SLTPWDFDRHDFGLTF TVWND+DT K        +KM STIKP+ QEWKL+AR KL  LGENA VFGKAG+YLAG+K AYIG EADRVW IPRLP T +F N NYRSSRKPQA+P + + GIQQD  VAKG++LTLR+A N  ++   +V P+PNGSYF
Sbjct:    5 AISPRRPASCHGPIPISFVPYATTISSERTTLREQLEKILESIPAFLDKTTNKVEEAVAGIPERVQYLFSEEGPLGALNFWRENKENITSTGQQLLESGELLVKGDADGFRDKASGIDFSWLKPTRVSEQENGKRHRRTVADQVQNTCLFLIESLTPWDFDRHDFGLTFVTVWNDLDTFKREGANEAIVKMASTIKPLYQEWKLTARTKLIDLGENATVFGKAGMYLAGNKPAYIGLEADRVWQIPRLPGTMLFVNVNYRSSRKPQADPIRTTVGIQQDFTVAKGIDLTLRLAFNPLDRHDITVTPIPNGSYF 317          
BLAST of Gchil5253.t1 vs. uniprot
Match: A0A1X6PE08_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PE08_PORUM)

HSP 1 Score: 121 bits (304), Expect = 5.010e-27
Identity = 67/169 (39.64%), Postives = 97/169 (57.40%), Query Frame = 0
Query:  155 FLIDSLTPWDFDRHDFGLTFATVWN----DVDTSKSADVRVPSLKMTSTIKPVEQEWKLSARGKLFALGENAMVFGKAGLYLAGDKAAYIGAEADRVWSIPRLPNTKIFANANYRSSRKPQ-AEPFKVSCGIQQDLEVAKGLELTLRIALNLTEKLGFSVYPVPNGSYF 318
            +++    PWD DRH F  TF   W+    +  T  SA +    LK+TST KP+ QEWKL+ R  +    +   V GKAG+YL G+ A Y+G E D+V S+P+L  T +FANAN+RS+R  +  +    S G+QQ  +V     LT+R+    T +  ++V P+P G YF
Sbjct:  560 YVLTHFWPWDHDRHYFAPTFWHQWSYHRAEGGTKASAGLHKLPLKITSTYKPLTQEWKLTTRVNMLPRLQLCQVIGKAGMYLKGEGAPYVGVELDKVVSVPKLKGTGVFANANWRSTRSEEKVDDVVASAGVQQTYKVGGLPPLTIRVGY--TSRNEWTVTPIPWGHYF 726          
The following BLAST results are available for this feature:
BLAST of Gchil5253.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5L1_9FLOR4.620e-13661.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PE08_PORUM5.010e-2739.64Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:264552..265508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5253.t1Gchil5253.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 264552..265508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5253.t1 ID=Gchil5253.t1|Name=Gchil5253.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=319bp
MIHNASVSPRRPIRSRHHRWVRIAPCATTPVPDTQTLKQQLEAILEGIPR
FLDNASNRVEKAVTDIPDQVKYLFSEEGPLGVLTFWRENKDNISNTGQQL
LESGERLAKGDAKGFREKASGINLSWLRPVRRLGSSESLDDATIVTDQVR
KTVLFLIDSLTPWDFDRHDFGLTFATVWNDVDTSKSADVRVPSLKMTSTI
KPVEQEWKLSARGKLFALGENAMVFGKAGLYLAGDKAAYIGAEADRVWSI
PRLPNTKIFANANYRSSRKPQAEPFKVSCGIQQDLEVAKGLELTLRIALN
LTEKLGFSVYPVPNGSYF*
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