Gchil5529.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5529.t1
Unique NameGchil5529.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length234
Homology
BLAST of Gchil5529.t1 vs. uniprot
Match: A0A2V3J6W1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W1_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 3.520e-90
Identity = 147/218 (67.43%), Postives = 168/218 (77.06%), Query Frame = 0
Query:    1 MSAGGENGGTSLESQSDKYIEKVTSIRDAFRRVEPGVAPPEAPESLRTWCSQTTYGVIGGMLFGGYRGLRQAQNKSIPSPVPTSSFNHRIAVFFVRESILTGSRVGVFASLFSAAALLAGHSGFTKRVDHPANYAAAGAFTCGLFAAAVGGWAPAGPAAAFGAAISGVAVTAHQSLEQFVAQSRPG-EVLQHDTQDADSSVERVIRTLEENLAAHPLR 217
            MS+   N  TS  +++ +   +++SIRDAFRRVEPG  PPEAPESLR WCSQTTYG++GGMLFGGYRGL QA+NKSIPSPVPT+S  HR AVFFVRESILTGSR+GVF S+FSA AL  G+SGFT  VDHP NYAAAGA TCGLFAAAVGGWAPA PAA FGA  +G A  A+QSL+  VA S    +V Q   +D D SV RVI T E+NLA HPLR
Sbjct:    1 MSSTANNSATSQVTEAQQ-TSRISSIRDAFRRVEPGETPPEAPESLRIWCSQTTYGLLGGMLFGGYRGLLQARNKSIPSPVPTNSIQHRTAVFFVRESILTGSRIGVFVSVFSATALAIGNSGFTAGVDHPTNYAAAGALTCGLFAAAVGGWAPAAPAAVFGAGTAGAAAMANQSLQHAVASSLVSIDVPQ--VRDEDGSVARVIHTFEQNLAKHPLR 215          
BLAST of Gchil5529.t1 vs. uniprot
Match: R7QG76_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG76_CHOCR)

HSP 1 Score: 177 bits (449), Expect = 2.380e-52
Identity = 109/201 (54.23%), Postives = 129/201 (64.18%), Query Frame = 0
Query:   27 RDAFRRVEPGVAPPEAPESLRTWCSQTTYGVIGGMLFGGYRGLRQAQNKSIPSPVPTSSFNHRIAVFFVRESILTGSRVGVFASLFSAAALLAGHSGFTKRVDHPANYAAAGAFTCGLFAAAVGGWAPAGPAAAFGAAISGVAVTAHQSLE---QFVAQSRPGEVLQHDTQDADS--SVERVIRTLEENLAAHPLRAASHQ 222
            RDAF RVEPG   P  PESLRTW SQTTYG++GGM+FGGYRGL QA+  S PSP PT+S  HR+AVFFVRESILTG+RVG+FAS+FSA +L A H+ +      P  +AAAGA TCGLF +A  G      AA FGA  +G    A  SLE   Q  A    GE L    Q+ +   SV  VI  LEE+L AHP+  A  +
Sbjct:    4 RDAFTRVEPGSPRPAPPESLRTWTSQTTYGLLGGMVFGGYRGLLQART-STPSPTPTTSARHRLAVFFVRESILTGARVGLFASVFSAVSLAA-HASYGDTT--PGTFAAAGALTCGLFGSAAAGRVAVPAAAGFGAVAAGALGVAQASLEDAYQIKAGEAQGEDLVETAQEGEEQGSVAIVINRLEESLKAHPVAMARRE 200          
The following BLAST results are available for this feature:
BLAST of Gchil5529.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6W1_9FLOR3.520e-9067.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG76_CHOCR2.380e-5254.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2337859..2338560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5529.t1Gchil5529.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2337859..2338560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5529.t1 ID=Gchil5529.t1|Name=Gchil5529.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=234bp
MSAGGENGGTSLESQSDKYIEKVTSIRDAFRRVEPGVAPPEAPESLRTWC
SQTTYGVIGGMLFGGYRGLRQAQNKSIPSPVPTSSFNHRIAVFFVRESIL
TGSRVGVFASLFSAAALLAGHSGFTKRVDHPANYAAAGAFTCGLFAAAVG
GWAPAGPAAAFGAAISGVAVTAHQSLEQFVAQSRPGEVLQHDTQDADSSV
ERVIRTLEENLAAHPLRAASHQDDDDSNDGSQT*
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