Gchil5488.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5488.t1
Unique NameGchil5488.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length385
Homology
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BLAST of Gchil5488.t1 vs. uniprot
Match: A0A2V3J6K1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K1_9FLOR)

HSP 1 Score: 253 bits (647), Expect = 2.480e-79
Identity = 142/273 (52.01%), Postives = 186/273 (68.13%), Query Frame = 0 
Query:  112 MTASAHAALDALQIALNSANSQVNQLSDRLQADLGPHSGALTLLSTLRQLEKQLPTLRQRMLNVYQQKAQVVSLCHRQLQQCHDFASRIAPVVDPSLQLHRHTAELVTSFQATTDALSANILPPQEDIDIDPHRVASLEPEATTAETSEAVQPSRNPKXXXXXXXXXXXXXXXXXXXXXXXXXXXSASFKPIPKASYNRLPRNIKIRAGKLPEVNAFYEKVFTFFNAQDNVPVVSKTLMAAMGEKSMEKFEVLRALAVLTASKRGWQLTCSKS 384
            MTASAHAALDAL IALNSA++Q+N LS RLQ++LG H  AL+L++ +R+LEKQLP LRQRML VY QKA +VS C RQLQ+C+ FASRIAPV+DP+L+   +TA+L+T+FQ  +D LS ++ P    +D++  R  S + + +   T+ A QPS+                              S+ F PI KA+YNRLPRNIKIRAG+LP +NAFY+KVF F ++Q N P   K LM A+ ++SM+KFEVLRALAV T +K+GWQLT   S
Sbjct:    1 MTASAHAALDALHIALNSADTQLNHLSVRLQSELGHHDTALSLITAVRRLEKQLPALRQRMLTVYDQKAHLVSGCQRQLQECYSFASRIAPVIDPALKPTDYTADLITAFQNASDTLSHHLPPQPHHLDLNFDRHDSGQSDQSNVATTPANQPSK------------PSSSSRAKTPPSVPKPNTSSHFDPISKAAYNRLPRNIKIRAGRLPAINAFYQKVFDFMHSQKNSPQSDKKLMVALEQQSMDKFEVLRALAVFTCTKKGWQLTSPSS 261
The following BLAST results are available for this feature:
BLAST of Gchil5488.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6K1_9FLOR2.480e-7952.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140
NoneNo IPR availableCOILSCoilCoilcoord: 158..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..303
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2106260..2107414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5488.t1Gchil5488.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2106260..2107414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5488.t1 ID=Gchil5488.t1|Name=Gchil5488.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=385bp
MRDSRMALSVVAHGGKLPSVSCALLALCALHRPAAVGHIPRGAPHLMLHV
ASLFCCTIETIISNFKLGIGDVIHSPDGSPSRQFAGTVHPHPLPCRGDSI
RRLAQPIFSSDMTASAHAALDALQIALNSANSQVNQLSDRLQADLGPHSG
ALTLLSTLRQLEKQLPTLRQRMLNVYQQKAQVVSLCHRQLQQCHDFASRI
APVVDPSLQLHRHTAELVTSFQATTDALSANILPPQEDIDIDPHRVASLE
PEATTAETSEAVQPSRNPKPKKKQKEKPKPKSSRTLSPESDSNSGASASF
KPIPKASYNRLPRNIKIRAGKLPEVNAFYEKVFTFFNAQDNVPVVSKTLM
AAMGEKSMEKFEVLRALAVLTASKRGWQLTCSKS*
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