Gchil5349.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5349.t1
Unique NameGchil5349.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length590
Homology
BLAST of Gchil5349.t1 vs. uniprot
Match: A0A2V3IW21_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW21_9FLOR)

HSP 1 Score: 374 bits (960), Expect = 1.090e-118
Identity = 241/615 (39.19%), Postives = 344/615 (55.93%), Query Frame = 0
Query:    1 MDLDAALDSVFVQTLPHLRFRTSGATIKPNTYYNCEEPVVWNCHPHIPGTAPPRPGLPGLVDQMSLLCPSTTYVLLPSDPFNELYGDDIELLLDVAETLKRIHDTLNVDMYIVLIFKRVAPIVCQQYAHLFQADFALQGCVGNLIYQSLLYDLETPHYHIHSPHLPRHPALTTQTSSSS-PLPRCRSLTSHSVPAPFDPAVPLKVAWKGSIYSTAHEQYSGFRFLHASSVGMPMGPVTIASHSPLSTNVSLHARARANFVISLDITSCEKTIDMVESWRSLNLEVVFEYDQKFFVASWVPPRGCINHWHITASSLHLPSPNIIPTVALKPSADSLIPSENLTPLLAPLPSDVVDLPVLSLKDMYKMSVTGNKTRSELFGQKKGLDIKNENQTSVGALRKTAAHGDI-SVFNCNIQSSCDRPR---SSILSRSEAKSKRS----------SIEK----RAFRSIVXXXXXXXXXXXXXXXXXA-----KSRHRRRFT-KIDPLLVAIAMRQSF---PNLVPVRSRAKEEMSNHLPKDYSWSHLGCIASDFDAQDLRTGNSLSSDNLSPALHGVEYQDKDAIAAVENAILISGTEFANASIKCERISQVTSALKQLQ 587
            M+++A LD+VF    P+ R +T G T+KP T     +PV W C+P I G   PR GLPGL DQ+SLLCPST YVLLPSD  +++ G+D++L++DV+E L+ +H+ L VDMY+VL+F+ VA  VCQ YAH+FQAD AL GCVGNLIY+S+L+D++     I      RH +L + T  +  P+ RCR L      + +    PL+V W+GSI+S    +YSGFRFLH S++GMP+G VT+ S  P S + S+    +A F+++LDIT+    ID+VESWR  N  V+ ++D   FVASW PPR  +N+WHI   S    S  +      K      I S+  + L + LP DV+ LPV S KDM   SV G+++     G +  L+ + ++  +    R  +   D+ S  + N ++   R     S  L   +  SKR+          ++ K    R F S                   A     KSR  R+ + KID  LV IAMRQ+F   P    VR    ++  +  P+  SWS +G +ASD+D  D     SLS +  +  LHG+EYQ +DA A VE AI  +G EF  +SI   ++S+V  AL++L+
Sbjct:    1 MEIEAFLDAVFFHPFPNPRLKTPGPTLKPRTPDKHGDPVSWRCYPPILGHTNPRKGLPGLCDQISLLCPSTAYVLLPSDSISDMKGEDLDLIVDVSEALRYVHEDLGVDMYVVLVFREVATEVCQSYAHVFQADIALTGCVGNLIYESILFDMKPTSLDIIGGEDHRHLSLASCTGRTPLPISRCRILPFQRAGSLYSFESPLRVVWRGSIFSQNDSEYSGFRFLHTSTLGMPIGRVTMKSCYPSSLSASISTSDQAAFLVTLDITASATAIDLVESWRECNAHVILDFDGATFVASWAPPREQLNYWHIMVVSAETVSTQVENAHVSKTRPCCRI-SDKQSILPSILPPDVMALPVFSFKDMISASVNGHRSLVNCLGDE--LERRCDSSQARNLTRALSLKRDMKSKMDPNCRTVRRRREGFDSESLDHMKGPSKRAKNVNYIHLSPTVSKNSRYRQFPSAYTIQDSRCLANHFSGAGEAGQRKVKSRLGRQVSVKIDYRLVVIAMRQAFESSPLSCAVRRGTTKDKVDLRPR--SWSRMGLMASDYDGPDTGRQESLSDEENTFMLHGIEYQCRDATAEVEAAIHTAGAEFIRSSISSVKLSRVMHALEELK 610          
The following BLAST results are available for this feature:
BLAST of Gchil5349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IW21_9FLOR1.090e-11839.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1187616..1189385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5349.t1Gchil5349.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1187616..1189385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5349.t1 ID=Gchil5349.t1|Name=Gchil5349.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=590bp
MDLDAALDSVFVQTLPHLRFRTSGATIKPNTYYNCEEPVVWNCHPHIPGT
APPRPGLPGLVDQMSLLCPSTTYVLLPSDPFNELYGDDIELLLDVAETLK
RIHDTLNVDMYIVLIFKRVAPIVCQQYAHLFQADFALQGCVGNLIYQSLL
YDLETPHYHIHSPHLPRHPALTTQTSSSSPLPRCRSLTSHSVPAPFDPAV
PLKVAWKGSIYSTAHEQYSGFRFLHASSVGMPMGPVTIASHSPLSTNVSL
HARARANFVISLDITSCEKTIDMVESWRSLNLEVVFEYDQKFFVASWVPP
RGCINHWHITASSLHLPSPNIIPTVALKPSADSLIPSENLTPLLAPLPSD
VVDLPVLSLKDMYKMSVTGNKTRSELFGQKKGLDIKNENQTSVGALRKTA
AHGDISVFNCNIQSSCDRPRSSILSRSEAKSKRSSIEKRAFRSIVRSQSS
HTVISTRNKRNTAKSRHRRRFTKIDPLLVAIAMRQSFPNLVPVRSRAKEE
MSNHLPKDYSWSHLGCIASDFDAQDLRTGNSLSSDNLSPALHGVEYQDKD
AIAAVENAILISGTEFANASIKCERISQVTSALKQLQFD*
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