Gchil5500.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5500.t1
Unique NameGchil5500.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length268
Homology
BLAST of Gchil5500.t1 vs. uniprot
Match: A0A4Z0LV14_9GAMM (Uncharacterized protein n=1 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0LV14_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 1.500e-7
Identity = 35/104 (33.65%), Postives = 54/104 (51.92%), Query Frame = 0
Query:  141 LQAWASVLRDGARHTLHVHDDATLTVVYYVRAAKR------DGALRLWDAR-------GPRAPFDGVVEVLPQAGEMVAFPGWVAHEVDAAVGAAARVSVVFNV 231
            L+ WA++LR G  +++H H +A  ++VYYV + ++       G L L D R         +    G   V P AG+M+AFP W+ H+V    G   R+S+  NV
Sbjct:   98 LEGWANLLRQGQYNSVHCHPNAAWSMVYYVTSNQQVADNPFSGKLELIDPRPGAGLTYSEQTTLYGRFLVNPHAGQMLAFPAWLQHQVHPCAGDGTRISIAANV 201          
BLAST of Gchil5500.t1 vs. uniprot
Match: UPI001CC9707A (2OG-Fe(II) oxygenase family protein n=1 Tax=Streptomyces olivaceus TaxID=47716 RepID=UPI001CC9707A)

HSP 1 Score: 60.5 bits (145), Expect = 1.830e-7
Identity = 33/95 (34.74%), Postives = 47/95 (49.47%), Query Frame = 0
Query:  142 QAWASVLRDGARHTLHVHDDATLTVVYYVRAAKRDGALRLWDARGPRAPFDG-----VVEVLPQAGEMVAFPGWVAHEVDAAVGAAARVSVVFNV 231
            +AWA V +    H LH H  +  + VYYV          L +   PR    G     V++V+P+AG +VAFP W+ H+V   V    RV + FN+
Sbjct:   97 EAWAVVYQPTGYHRLHAHPGSAWSGVYYVDTGDLQQGTGLIEFIDPRTAAIGSEAHPVIDVVPEAGMLVAFPSWLTHDVSPVVATRNRVCIAFNI 191          
BLAST of Gchil5500.t1 vs. uniprot
Match: A0A7W7S101_9ACTN (Uncharacterized protein (TIGR02466 family) n=1 Tax=Streptosporangium album TaxID=47479 RepID=A0A7W7S101_9ACTN)

HSP 1 Score: 57.0 bits (136), Expect = 3.760e-6
Identity = 39/105 (37.14%), Postives = 51/105 (48.57%), Query Frame = 0
Query:  137 TARRL-QAWASVLRDGARHTLHVHDDATLTVVYYVRAAKRD-----GALRLWDARGPRAPFD---GVVEVLPQAGEMVAFPGWVAHEVDAAVGAAA-RVSVVFNV 231
            TAR + + WA    +GA    H H   ++  VYY+     D     G L+L D R      D   GV+ + P AG MVAFPGW+ H+V A       R+ V FNV
Sbjct:   99 TARPIAEGWAVTYAEGASLLPHTHHSTSIAGVYYIDPGTTDSGQDPGFLQLLDPRPGAVARDSSSGVIRIQPVAGRMVAFPGWLNHQVRATASKERLRICVAFNV 203          
BLAST of Gchil5500.t1 vs. uniprot
Match: UPI0013EAA45A (TIGR02466 family protein n=1 Tax=Thioalkalivibrio sp. XN8 TaxID=2712863 RepID=UPI0013EAA45A)

HSP 1 Score: 55.8 bits (133), Expect = 9.380e-6
Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = 0
Query:  141 LQAWASVLRDGARHTLHVHDDATLTVVYYV----------RAAKRDGALRLWDARGPRAPF---------DGVVEVLPQAGEMVAFPGWVAHEVDAAVGAAARVSVVFNV 231
            LQAW +V R G  H LH H  A L+  YYV          R+ +  GA+  +D R P+A           D    +LPQAGE++A+P ++ H V   +    RVS+ FNV
Sbjct:   93 LQAWGNVNRFGDYHNLHNHPHAWLSGTYYVQVPEPKALPGRSDRNPGAISFYDPR-PQANMLAIRGDPQVDPEHRILPQAGEILAWPAFLHHLVHPNLSDELRVSISFNV 201          
BLAST of Gchil5500.t1 vs. uniprot
Match: A0A7T9EJ95_9PROT (2OG-Fe(II) oxygenase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7T9EJ95_9PROT)

HSP 1 Score: 55.8 bits (133), Expect = 9.600e-6
Identity = 41/113 (36.28%), Postives = 50/113 (44.25%), Query Frame = 0
Query:  140 RLQAWASVLRDGARHTLHVHDDATLTVVYYVRAA------KRDGALRLWDARGPR----APF----------DGVVEVLPQ-AGEMVAFPGWVAHEVDAAVGAAARVSVVFNV 231
            R   WA+V R G  +  H H  +  + VYYV            GAL   D RGP     AP            G  E +P  AG MV FP W+ H V    GAAAR+S+ FN+
Sbjct:   97 RANIWANVNRAGHGNEFHCHPGSFWSGVYYVEDGGIADDPTLGGALEFMDPRGPAPAMYAPHLAFAVPGGQSIGACETVPPVAGRMVMFPSWILHAVRPYTGAAARISIAFNL 209          
The following BLAST results are available for this feature:
BLAST of Gchil5500.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4Z0LV14_9GAMM1.500e-733.65Uncharacterized protein n=1 Tax=Haliea sp. SAOS-16... [more]
UPI001CC9707A1.830e-734.742OG-Fe(II) oxygenase family protein n=1 Tax=Strept... [more]
A0A7W7S101_9ACTN3.760e-637.14Uncharacterized protein (TIGR02466 family) n=1 Tax... [more]
UPI0013EAA45A9.380e-636.36TIGR02466 family protein n=1 Tax=Thioalkalivibrio ... [more]
A0A7T9EJ95_9PROT9.600e-636.282OG-Fe(II) oxygenase n=1 Tax=Rhodospirillales bact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012668Conserved hypothetical protein CHP02466PFAMPF137592OG-FeII_Oxy_5coord: 143..230
e-value: 7.4E-14
score: 52.0
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 81..234
e-value: 2.1E-23
score: 85.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:2159564..2160367 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5500.t1Gchil5500.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 2159564..2160367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5500.t1 ID=Gchil5500.t1|Name=Gchil5500.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=268bp
MTTDTATVDVATDTAPMVMEKLWCTCISRTHLRAHASIRNVSALNEQLSA
LIVSDHGAFARMHGNDVHGDATALNDLFFAYQTGAGDAFNDSAPAVQARV
NTLQHRRSAAFEAVTRAAATLADAQLSAWGVAQNKGTARRLQAWASVLRD
GARHTLHVHDDATLTVVYYVRAAKRDGALRLWDARGPRAPFDGVVEVLPQ
AGEMVAFPGWVAHEVDAAVGAAARVSVVFNVRGAWRGTDDDAAPDVRALR
APRDSRWRLDWGGELPS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012668CHP02466